Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15036
- Subject:
- XM_011535042.2
- Aligned Length:
- 3081
- Identities:
- 1343
- Gaps:
- 1630
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCAGCGCTATGGATGCCGGGAGCGATCTTTGGAAAGGAGTCCCCGGCTCGAGCGACACTGCCCCCCTGGGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTGCAGGAGATGGCTGGCCGAGCTCTCAAGCAGACTGGCAGCAGGAGCATCGAGGCCGCCCTGGAGTACATCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCAAGATGGGCTACCTGGACCCGAGGAATGAGCAGATTGTGCGGGTCATTAAGCAGACCTCCCCAGGAAAGGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTCATGCCAACCCCAGTGACGCGGAGGCCCAGCTTCGAAGGAACCGGCGATTCGTTTGCGTCCTACCACCAGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAGCGGTACCCCCTACGAGGGCCCAAGCTTCGGCGCTGACGGCCCCACGGCGCTGGAGGAGATGCCGCGGCCGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACGTGGACTACCTTTTCCCCGGAGTCGGCCCCCACGGGCCCGGCCACCAGCACCAGCACCCACCCAAGGGCTAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGTGCCAGCGTAGAGGCAGCAGGGGCACACTTCCCGCTGCAGGGCGCGCACTACGGGCGGCCGCACCTGCTGGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCCTGGGGAACCCCTGGGCTACGGAGTGCAGCGCAGCCCCTCCTTCCAGAGCAAGACGCCGCCGGAGACCGGGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTTACGCCAGCCTGCCCACGAAGGGCCAGGGAGGACCGCCAGGCGCCGGCCTCGCTTTCCCACCCCCTGCCGCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGGCTCTACGTGCCGCACCCACACCACAAGCAGGCCGGTCCCGCGGCCCACCAGCTGCATGTGCTGGGCTCCCG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAGCCAGGTGTTCGCCAGCGACAGCCCCCCGCAGAGCCTGCTCACTCCCTCGCGGAACAGCCTCAACGTGGACC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGTATGAATTGGGCAGCACCTCCGTCCAGCAGTGGCCGGCTGCCACCCTGGCCCGCCGGGACTCCCTGCAGAAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCGGGCCTGGAGGCGCCGCCGCGCGCGCACGTGGCCTTCCGGCCTGACTGCCCAGTGCCCAGCAGGACCAACTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTTCAACAGCCACCAGCCGCGGCCCGGTCCGCCTGGCAAGGCCGAGCCCTCCCTGCCCGCCCCCAACACCGTGA 1036
Query 1 --------------------------------------------------ATGAGGCCAAAG------------ 12
.|||||||..||
Sbjct 1037 CGGCTGTCACGGCCGCGCACATCTTGCACCCGGTGAAGAGCGTGCGTGTGCTGAGGCCGGAGCCGCAGACGGCT 1110
Query 13 -------------ACTTTTCCTG-----CCACGACTTATTCTGGAAATAG------------------------ 44
||....|||| ||.||.|| |
Sbjct 1111 GTGGGGCCCTCGCACCCCGCCTGGGTGCCCGCGCCT-------------GCCCCGGCCCCCGCCCCCGCCCCCG 1171
Query 45 --CCGGCAGC----------GACTGCAAGAGATTCGTGAGGGGTTAAAGCA-GCCATCCAAGTCT--------T 97
|||||.|| |||..|||| |||| |||| ||| || .
Sbjct 1172 CCCCGGCTGCGGAGGGCTTGGACGCCAAG--------GAGG------AGCATGCC--------CTGGCGCTGGG 1223
Query 98 CGGTTCAGG-GGCTACCCGC----------------AGGACCAAACAGTGA------CACTTC----------- 137
|||..|||| |.||.||||| |||.|||.||.| || |.|.||
Sbjct 1224 CGGCGCAGGCGCCTTCCCGCTGGACGTGGAGTACGGAGGCCCAGACCG-GAGGTGCCCGCCTCCGCCCTACCCG 1296
Query 138 -----CCTG--GATGC-CA--AAGTCCTGGGGAGCAAAGATGCCACCAGG-CAGC---AGCAGCAG--ATG--- 192
|||| |.||| || ||||| |||||| .|.|.|||.|| |||| .|| |||| |||
Sbjct 1297 AAGCACCTGCTGCTGCGCAGCAAGTC----GGAGCA---GTACGACCTGGACAGCCTGTGC-GCAGGCATGGAG 1362
Query 193 -AGAGCC---------ACCCCAA--AGTTCG--------GACCTTATCAG--AAAGCCTTGAGGG--------- 235
|||||| .|||||| ||..|| |||...|.|.| |||||....||||
Sbjct 1363 CAGAGCCTCCGTGCGGGCCCCAACGAGCCCGAGGGCGGCGACAAGAGCCGCAAAAGCGCCAAGGGGGACAAAGG 1436
Query 236 ------------AAATCAGAT--ATTCCT----TGTTGCCTTTTGCTAA-----------------------TG 268
|||.||||| |..||| .|||.||.|..||.|| .|
Sbjct 1437 CGGAAAGGATAAAAAGCAGATTCAGACCTCTCCCGTTCCCGTCCGCAAAAACAGCAGAGACGAAGAGAAGAGAG 1510
Query 269 AATCGGGCA---------------------CCTCT--------------GCAGC---TGCAGAA-GTGAACCGG 303
|.||..||| |||.| ||||| ||.|||| || |..
Sbjct 1511 AGTCACGCATCAAGAGCTACTCGCCATACGCCTTTAAGTTCTTCATGGAGCAGCACGTGGAGAATGT----CAT 1580
Query 304 CAAATGCT----GCAGGAACTGGTGAA-CGCAGGATGC-----GACCAGGAGATGGCTGGCCGAGCT---CTC- 363
||||..|| ||||.| |||.|| ||.|||.||| ||.||.||.||||| |..|||| |||
Sbjct 1581 CAAAACCTACCAGCAGAA---GGTTAACCGGAGGCTGCAGCTGGAGCAAGAAATGGC---CAAAGCTGGACTCT 1648
Query 364 ---AAGCAGACTGGCAGCAGGAGCATCGAGGCCG----CCCT---------GGAG------TACATCAG----- 410
||||.| |||||||||| ||.||.| .||| .||| ||||.|||
Sbjct 1649 GTGAAGCTG------AGCAGGAGCA--GATGCGGAAGATCCTCTACCAGAAAGAGTCTAATTACAACAGGTTAA 1714
Query 411 -------CAAGATG-----GGCTACCTG--------------GACCCGAGGAAT-----------GAGCAGATT 447
||||||| |.||| || .||||..||.|| |||.|| |
Sbjct 1715 AGAGGGCCAAGATGGACAAGTCTA--TGTTTGTCAAGATCAAAACCCTGGGGATCGGTGCCTTTGGAGAAG--T 1784
Query 448 GTGC-------------GGGTCATT---------------AAGCAGACC----------------TCC----CC 473
|||| .||.||.| |.|.||||| ||| ||
Sbjct 1785 GTGCCTTGCTTGTAAGGTGGACACTCACGCCCTGTACGCCATGAAGACCCTAAGGAAAAAGGATGTCCTGAACC 1858
Query 474 AGGAA--AGG-GGCTCATGCCAACCCC---AGTGAC------GCGGAGGCCCAG-------------------- 515
|||| ||| |||.||.|.|||..|| ||.||| ||.|||| |||
Sbjct 1859 -GGAATCAGGTGGCCCACGTCAAGGCCGAGAGGGACATCCTGGCCGAGG--CAGACAATGAGTGGGTGGTCAAA 1929
Query 516 -----------CTTCGAAG----------------------------------------------------GAA 526
||||.||| ||.
Sbjct 1930 CTCTACTACTCCTTCCAAGACAAAGACAGCCTGTACTTTGTGATGGACTACATCCCTGGTGGGGACATGATGAG 2003
Query 527 CCGGC-GATTCGTTTG--CGTCCTTCCCTGAGCACCTGGCCCGGTTCTACATCGCAGAGCTGACTTTGGCCATT 597
||.|| |||.||..|| .|| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2004 CCTGCTGATCCGGATGGAGGT-CTTCCCTGAGCACCTGGCCCGGTTCTACATCGCAGAGCTGACTTTGGCCATT 2076
Query 598 GAGAGTGTCCACAAGATGGGCTTCATCCACCGAGACATCAAGCCTGATAACATTTTGATAGATCTGGATGGTCA 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2077 GAGAGTGTCCACAAGATGGGCTTCATCCACCGAGACATCAAGCCTGATAACATTTTGATAGATCTGGATGGTCA 2150
Query 672 CATTAAACTCACAGATTTCGGCCTCTGCACTGGGTTCAG--TGACTCACAANTCCCAAANTATTNCCAGAAANG 743
||||||||||||||||||||||||||||||||||||||| .|||||||||.||| ||.||||.|||||||.|
Sbjct 2151 CATTAAACTCACAGATTTCGGCCTCTGCACTGGGTTCAGGTGGACTCACAATTCC--AAATATTACCAGAAAGG 2222
Query 744 NAGCCATGTCAGACAGGACAGCATGGAGCCCAGCGACNTTCTGGGGATGATGTGGTTCTANCNGGTCGGTGTGG 817
.||||||||||||||||||||||||||||||||||||. ||| ||||||||||| ||||.|. ||||||||||
Sbjct 2223 GAGCCATGTCAGACAGGACAGCATGGAGCCCAGCGACC-TCT-GGGATGATGTG--TCTAACT-GTCGGTGTGG 2291
Query 818 GGACAGGCTG-AGACCCCTAGAGCAGAGGGCGCGGAAGCAGCACCAGAGGTGCCTGGCACATTCACTGGTGGGG 890
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2292 GGACAGGCTGAAGA-CCCTAGAGCAGAGGGCGCGGAAGCAGCACCAGAGGTGCCTGGCACATTCACTGGTGGGG 2364
Query 891 ACTCCAAACTACATCGCACCCGAGGTGCTCCTCCGCAAAGGGTACACTCAACTCTGTGACTGGTGGAGTGTTGG 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2365 ACTCCAAACTACATCGCACCCGAGGTGCTCCTCCGCAAAGGGTACACTCAACTCTGTGACTGGTGGAGTGTTGG 2438
Query 965 AGTGATTCTCTTCGAGATGCTGGTGGGGCAGCCGCCCTTTTTGGCACCTACTCCCACAGAAACCCAGCTGAAGG 1038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2439 AGTGATTCTCTTCGAGATGCTGGTGGGGCAGCCGCCCTTTTTGGCACCTACTCCCACAGAAACCCAGCTGAAGG 2512
Query 1039 TGATCAACTGGGAGAACACGCTCCACATTCCAGCCCAGGTGAAGCTGAGCCCTGAGGCCAGGGACCTCATCACC 1112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2513 TGATCAACTGGGAGAACACGCTCCACATTCCAGCCCAGGTGAAGCTGAGCCCTGAGGCCAGGGACCTCATCACC 2586
Query 1113 AAGCTGTGCTGCTCCGCAGACCACCGCCTGGGGCGGAATGGGGCCGATGACCTGAAGGCCCACCCCTTCTTCAG 1186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2587 AAGCTGTGCTGCTCCGCAGACCACCGCCTGGGGCGGAATGGGGCCGATGACCTGAAGGCCCACCCCTTCTTCAG 2660
Query 1187 CGCCATTGACTTCTCCAGTGACATCCGGAAGCAGCCAGCCCCCTACGTTCCCACCATCAGCCACCCCATGGACA 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2661 CGCCATTGACTTCTCCAGTGACATCCGGAAGCAGCCAGCCCCCTACGTTCCCACCATCAGCCACCCCATGGACA 2734
Query 1261 CCTCGAATTTCGACCCCGTAGATGAAGAAAGCCCTTGGAACGATGCCAGCGAAGGTAGCACCAAGGCCTGGGAC 1334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2735 CCTCGAATTTCGACCCCGTAGATGAAGAAAGCCCTTGGAACGATGCCAGCGAAGGTAGCACCAAGGCCTGGGAC 2808
Query 1335 ACACTCACCTCGCCCAATAACAAGCATCCTGAGCACGCATTTTACGAATTCACCTTCCGAAGGTTCTTTGATGA 1408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2809 ACACTCACCTCGCCCAATAACAAGCATCCTGAGCACGCATTTTACGAATTCACCTTCCGAAGGTTCTTTGATGA 2882
Query 1409 CAATGGCTACCCCTTTCGATGCCCAAAGCCTTCAGGAGCAGAAGCTTCACAGGCTGAGAGCTCAGATTTAGAAA 1482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2883 CAATGGCTACCCCTTTCGATGCCCAAAGCCTTCAGGAGCAGAAGCTTCACAGGCTGAGAGCTCAGATTTAGAAA 2956
Query 1483 GCTCTGATCTGGTGGATCAGACTGAAGGCTGCCAGCCTGTGTACGTG 1529
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2957 GCTCTGATCTGGTGGATCAGACTGAAGGCTGCCAGCCTGTGTACGTG 3003
