Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15039
- Subject:
- NR_146936.2
- Aligned Length:
- 2818
- Identities:
- 680
- Gaps:
- 2116
Alignment
Query 1 ------------------------ATGGAGCA-TGCCTTT---------------------ACCCCGTT----- 23
|| ||.|| || ||| |.||||||
Sbjct 1 GGTTGTATGCCATAGCTCTGTAACAT-GAACAGTG--TTTCCAATAAACTGTCCACCGCAAAACCCGTTAAAAA 71
Query 24 -----GGAGCCCCTGCTTTCCA----CTG-GGAATTTGAAGTACTGCCTTGTAATTCTTAATCAGCCTTTGGAC 87
.|||| |||| ||| |||..|.|.|| |.|||| |..|||...|| |||
Sbjct 72 ATGAGTGAGC--------TCCATGAGCTGAGGAGCTAGCAG-ATTGCC--GGGATTACAAA----------GAC 124
Query 88 AACTA---------TTTTCGTCATC----TTTGGAACAA-AGCTCTTTTAAGAGCCTGTGCCGATGGAGGTGCC 147
|||.| .||||.|.|.| ||| |||| ..||||||||||||||||||||||||||||||||
Sbjct 125 AACGAGACAGGACCCTTTCCTTAGCAGGATTT---ACAATCTCTCTTTTAAGAGCCTGTGCCGATGGAGGTGCC 195
Query 148 AACCGCTTATATGATATCACCGAAGGAGAGAGAGAA-------------------------------------- 183
||||||||||||||||||||||||||||||||||||
Sbjct 196 AACCGCTTATATGATATCACCGAAGGAGAGAGAGAAAGATTCCTCTGACAGTATCCTCCAAGACCTGACATGGA 269
Query 184 -------------------------------------------------------------------------- 183
Sbjct 270 CAATGTGTGAAAAAGCGCTCAACCTCCAACTTGAAACTCTCCTCGAGGCCCCCAGCCACCAGTCATCTCATCAG 343
Query 184 -------------------------------------------------------------------AGCTTTT 190
|||||||
Sbjct 344 GACACCGAAAGACACCCATTACTGTGGAGCTTCCAAGGGTCTTGGCAACTCTTTTATCGGAAACGAGAGCTTTT 417
Query 191 TGCCTGAATTCATCAATGGAGACTTTGATTCTATTAGGCCTGAAGTCAGAGAATACTATGCTACTAAGGGATGT 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 418 TGCCTGAATTCATCAATGGAGACTTTGATTCTATTAGGCCTGAAGTCAGAGAATACTATGCTACTAAGGGATGT 491
Query 265 GAGCTCATTTCAACTCCTGATCAAGACCACACTGACTTTACTAAGTGCCTTAAAATGCTCCAAAAGAAGATAGA 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 492 GAGCTCATTTCAACTCCTGATCAAGACCACACTGACTTTACTAAGTGCCTTAAAATGCTCCAAAAGAAGATAGA 565
Query 339 AGAAAAAGACTTAAA----------------------------------------------------------- 353
|||||||||||||||
Sbjct 566 AGAAAAAGACTTAAAGAAGAAACAGTGAAAGGAATACTGTTCAATTCCAACATCAGCTGTGTAACCGAGGCATC 639
Query 354 ---------------------------------------------------------------GGTTGATGTGA 364
|||||||||||
Sbjct 640 GTAATACTTTTATGACAAGTTTCACTACCTTTTTGCCTGTGCCAGTGTACCTCAAAGGGATATGGTTGATGTGA 713
Query 365 TCGTGACACTGGGAGGCCTTGCTGGGCGTTTTGACCAGATTATGGCATCTGTGAATACCTTGTTCCAAGCGACT 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 714 TCGTGACACTGGGAGGCCTTGCTGGGCGTTTTGACCAGATTATGGCATCTGTGAATACCTTGTTCCAAGCGACT 787
Query 439 CACATCACTCCTTTTCCAATTATAATAATCCAAGAGGAATCGCTGATCTACCTGCTCCAACCAGGAAAGCACAG 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 788 CACATCACTCCTTTTCCAATTATAATAATCCAAGAGGAATCGCTGATCTACCTGCTCCAACCAGGAAAGCACAG 861
Query 513 GTTGCATGTAGACACTGGAATGGAGGGTGATTGGTGTGGCCTTATTCCTGTTGGACAGCCTTGTAGTCAGGTTA 586
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||..|||||||
Sbjct 862 GTTGCATGTAGACACTGGAATGGAGGGTGATTGGTGTGGCCTTATTCCTGTTGGACAGCCTTGTATGCAGGTTA 935
Query 587 CAACCACAGGCCTCAAGTGGAACCTCA----------------------------------------------- 613
|||||||||||||||||||||||||||
Sbjct 936 CAACCACAGGCCTCAAGTGGAACCTCAGAACTTGTGACTACACTAGGACCACCTGGATAGCCAAGGATAATCCC 1009
Query 614 -----------------------------------------------------------CAAATGATGTGCTTG 628
|||||||||||||||
Sbjct 1010 GTCCCAAGACTAATCAGATTAATCAGACTTAATCACATCTGTAAAGTTCCTCTTGCCATCAAATGATGTGCTTG 1083
Query 629 CTTTTGGAACATTGGTCAGTACTTCCAATACCTACGACGGGTCTGGTGTTGTGACTGTGGAAACTGACCACCCA 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1084 CTTTTGGAACATTGGTCAGTACTTCCAATACCTACGACGGGTCTGGTGTTGTGACTGTGGAAACTGACCACCCA 1157
Query 703 CTCCTCTGGACCATGGCCATCAAAAGC----------------------------------------------- 729
|||||||||||||||||||||||||||
Sbjct 1158 CTCCTCTGGACCATGGCCATCAAAAGCTAACCTGTTGACTGGCATCCATAAGTGTGCCTCTGCCTTATCTCATT 1231
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1232 TCTCAACAGTTCATTGCTCAACAAGAACGATTCACCTGGGTTTGCAAGAATCTAAACCTCTCTAGGGGAAGCCC 1305
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1306 ACTGGGTTTAAAGATGTTAGTGTTTAGATAATACAGGTAACATTATAAATGACAGATCTCAATTTTATAGTAGT 1379
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1380 GGGAAAGATACATGCTAAGAAAGCAAATAAGCTCTATTATATTCGGTTGGAACCTAATGGGAATCATTCCACTA 1453
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1454 TACAATTCAGTACTGATTATTCTTCTTACATTATTAATCATTCCATTTATCCTAGAAAATTGTTTTTAATTTGA 1527
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1528 ATCAGAGAAAACTGTTGAGGTTCCTCTTGGAGTCTAGAACATCCTTAAATGTCTAACAACAAGGGCTACCTCTG 1601
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1602 AGTACCTTTTAGTATTAGTTTTCTGTATATGATATATATTATCTTATACTGAAAAAAAATTCCTTTCAGATTGG 1675
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1676 GGTGTTAGAAGTGCACCAGGTCACTCTGACCTTATTACTGTCTTTGGTATTGTCTTAAATAAATCAAGAATCAT 1749
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1750 TGACCTAATTGTTAAATTTAAAAATAGGTAGTTAGCAATAGGTGGAAAGAGAAATGATGTGAAAGATAAATGAT 1823
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1824 GATTCGTGGAGCCCTACTCACACATTAACCCCCAAATTCAAAAGTAAGAATGCAAAAGTCTAGAGGGGGTAACA 1897
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1898 GTCTGCATCATCATCACAACCTAAATGGAGAAAGCTGTGCAGAGGAAACTTAAGCATAAAAATTGAATTCGTTT 1971
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1972 CTGACATACCTTAGACTGAAAAACTGTTGGTTCATCCAGAAGTGTATTCATATTACCAGAAAATGAGTTTGTCT 2045
Query 730 -------------------------------------------------------------------------- 729
Sbjct 2046 ATGGGGATACATGAACTTCATATACTAAGGAGCCTAACTCCAAAGCCTGCGTTCTCATCCCAGTCTGATATTCA 2119
Query 730 -------------------------------------------------------------------------- 729
Sbjct 2120 CCTAAGTTTCCGGACCCTTTTCCTTAGCTGTAAAATGGAAGCGGTTGGACTGATGGTGTCTGAGGTTCTTTCCC 2193
Query 730 -------------------------------------------------------------------------- 729
Sbjct 2194 ACACTGAAATTCTAAATATTGACACTTAGCAGTCATAGGGCTGATAATACACACAGTTACTGACTTAGCCTAAA 2267
Query 730 -------------------------------------------------------------------------- 729
Sbjct 2268 CAACCTGGTGCATCGAAATGTATTCACCTTTCTTTTGTAAAGAGACCATCTTCTATCTTCTTTCCACCTTTCTC 2341
Query 730 -------------------------------------------------------------------------- 729
Sbjct 2342 TGTTTTATGAAACCAACTGTTGACATACAAACCATGATTGAAGGAGAACCTGTCCAACATGTTTTATGTACACA 2415
Query 730 -------------------------------------------------------------------------- 729
Sbjct 2416 AATCCCTATGTTGCTATAAGAAAAGTGAAAGTAACTGTTTTCTTCTTGGTGCTATGACAGTGTGAGACTCAGGT 2489
Query 730 -------------------------------------------------------------------------- 729
Sbjct 2490 TGTCTGTAGAGAATGAAAGGAGCAGTGGCCCGCGTGATTGTGGCATTTAAGGAGCAGTGGCCCATGTGACTGTG 2563
Query 730 -------------------------------------------------------------------------- 729
Sbjct 2564 GCATTTTCGGCACTTTTCATTACTTTCTGCTTGACCGGAAGTTGAGGCTTAGCTATGTTTCCATCTTCAGTTTC 2637
Query 730 -------------------------------------------------------------------------- 729
Sbjct 2638 TGAAGACTAGTTATATATTCCTTACTAGAAATATATTCATAATATATAAAAGAAATATATCTGTGATTTTAAAA 2711
Query 730 -------------------------------------------------------------------------- 729
Sbjct 2712 TTTTGCTACCAAAGAATGCATGTTCTGTGTGCCCTGAAAATGTTACCAGTGTTAATAAATGGATACTTATCAAA 2785
Query 730 ------ 729
Sbjct 2786 AAAGAA 2791
