Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_15207
• Subject: NM_001367173.2
• Aligned Length: 1468
• Identities: 710
• Gaps: 659

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTTTCAGGACCCTGTGGCCTGTGAGGATGTTGCTGTGAACTTCACCCAGGAGGAGTGGGCTTTGCTGGATAT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTCGCAGAGGAAACTCTACAGGGAAGTGATGCTGGAAACTTTCAGGAACCTGACCTCTATAGGGAAAAAGTGGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AAGACCAGAACATTGAATATGAGTACCAAAACCCCAGGAGAAACTTCAGGAGTCTCATAGAAGGGAATGTCAAT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAAATTAAAGAAGACAGTCATTGTGGAGAAACTTTTACCCAGGTTCCAGATGACAGGCTGAACTTCCAGGAGAA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GAAAGCTTCTCCTGAAGCAAAATCATGTGATAACTTTGTATGTGGAGAAGTTGGCATAGGTAACTCATCTTTTA  370

Query    1  --ATGAACATCAGAGGTGACACTGGACACAAGGCATGTGAATGTCAGGAATATGGACCAAAGCCATGGAAGAGT  72
              |||||||||||||||||||.|||.||||||||||..||.|.||||||.||||.|||||||||||..|||.||
Sbjct  371  ATATGAACATCAGAGGTGACATTGGGCACAAGGCATACGAGTATCAGGACTATGCACCAAAGCCATATAAGTGT  444

Query   73  CAACAACCTAAAAAAGCCTTCAGATATCACCCCTCCTTGAGAACACAAGAAAGGGATCACACTGGAAAGAAACC  146
            |||||||||||.||||||||||||||||||||||||||.|||||||||||||||.|||||||.|||.|||||||
Sbjct  445  CAACAACCTAAGAAAGCCTTCAGATATCACCCCTCCTTTAGAACACAAGAAAGGAATCACACCGGAGAGAAACC  518

Query  147  CTATGCTTGTAAAGAATGTGGAAAAAACATTATTTACCATTCAAGCATTCAAAGACACATGGTAGTGCACAGTG  220
            ||||||||||||||||||||||||||.|.||||||.|||||||.||||||.|||||.|||||||.|||||||||
Sbjct  519  CTATGCTTGTAAAGAATGTGGAAAAACCTTTATTTCCCATTCAGGCATTCGAAGACGCATGGTAATGCACAGTG  592

Query  221  GGGATGGACCTTATAAATGTAAGTTTTGTGGGAAAGCATTCCATTGTCTCAGTTTATATCTTATCCATGAAAGA  294
            |||||||||||||||||||||||||||||||||||||..|||||||||||||.|||||||||||||||||||||
Sbjct  593  GGGATGGACCTTATAAATGTAAGTTTTGTGGGAAAGCTGTCCATTGTCTCAGATTATATCTTATCCATGAAAGA  666

Query  295  ACTCACACTGGAGAGAAACCGTATGAATGTAAACAATGTGGTAAATCTTTTAGTTATTCTGCTACCCATCGAAT  368
            ||||||||||||||||||||||||||||||||||||||||.||||||.||||||||||||||||||||||||||
Sbjct  667  ACTCACACTGGAGAGAAACCGTATGAATGTAAACAATGTGTTAAATCCTTTAGTTATTCTGCTACCCATCGAAT  740

Query  369  ACATGAAAGAACTCACATTGGAGAAAAGCCTTATGAATGTCAGGAATGTGGGAAAGCATTCCATAGTCCCAGAT  442
            |||||||||||||||||.|||||||||||||||||||||||||.|||||||||||||||||||||||.||||.|
Sbjct  741  ACATGAAAGAACTCACACTGGAGAAAAGCCTTATGAATGTCAGCAATGTGGGAAAGCATTCCATAGTTCCAGTT  814

Query  443  CCTGTCACAGACATGAAAGGAGTCACATGGGAGAGAAGGCTTATCAATGTAAGGAATGTGGAAAAGCATTCATG  516
            |.|.||                                                         ||||       
Sbjct  815  CTTTTC---------------------------------------------------------AAGC-------  824

Query  517  TGTCCCCGTTATGTTCGTAGACATGAAAGGACCCACTCTAGGAAAAAACTTTATGAATGTAAGCAGTGTGGGAA  590
                                ||||.||||.||||||.||.||..|||.|..|||||||||||.||.|||||.||
Sbjct  825  --------------------ACATAAAAGAACCCACACTGGGGGAAAGCCATATGAATGTAAACAATGTGGCAA  878

Query  591  AGCATTATCCTCTCTTACAAGTTTTCAAACACACATAAGAATGCACTCTGGAGAAAGACCTTATGAATGTAAGA  664
                  ||||| ||     |||                          |||                |||    
Sbjct  879  ------ATCCT-TC-----AGT--------------------------TGG----------------TGT----  894

Query  665  CATGTGGGAAAGGCTTTTATTCTGCCAAGTCATTTCAAAGACATGAAAAAACTCACAGTGGAGAGAAACCGTAT  738
            |||                          ||.|||||||.||||||||.||||||||.|||.|||||.||.|.|
Sbjct  895  CAT--------------------------TCCTTTCAAATACATGAAAGAACTCACACTGGGGAGAAGCCCTGT  942

Query  739  AAATGCAAGC-AATGTGGTAAAGCCTTCACTCGTTCCGGTTCCT---TTCGATATCATGAAAGGACTCACACTG  808
            .|||| .||| |||||..||||||.|||..|.|||.|.|.||||   ||.||   |||.||||||.||||||.|
Sbjct  943  GAATG-TAGCAAATGTAATAAAGCATTCCGTAGTTACAGATCCTATCTTAGA---CATAAAAGGAGTCACACGG  1012

Query  809  GAGAGAAACCCTATGAGTGTAAGCAATGTGGGAAAGCCTTCAGATCTGCCCCAAATCTTCAATCGCATGGTAGG  882
            |||||||.||.|||.|.||||||.|||||.|.|||||.||||                                
Sbjct 1013  GAGAGAAGCCTTATCAATGTAAGGAATGTAGAAAAGCATTCA--------------------------------  1054

Query  883  ACTCACACTGGAGAGAAACCGTATCAATGTAAGGAATGTGGGAAAGCTTTCAGATCTGCCTCACAACTTCGAAT  956
                               ||||||                        .|||.||         .|||||.|.
Sbjct 1055  -------------------CGTATC------------------------CCAGTTC---------CCTTCGTAG  1076

Query  957  CCATCGTAGGATTCACACTG-GAGAGAAACCCTATGAATGTAAGAAATGTGGGAAAGCCT--TCAGATATGTCC  1027
            .|||...||||..|||.||| || |.|||||.||||||||||||.|.|||||||||||.|  ||..|||.||  
Sbjct 1077  ACATGAAAGGACCCACTCTGCGA-AAAAACCTTATGAATGTAAGCAGTGTGGGAAAGCATTATCTTATAAGT--  1147

Query 1028  AGAACTTTCGATTTCATGAAAGGACAAACACACATAAGAATGCACTCTGGAGAAAGACCTTA  1089
                 |||                |||||||||.|||||||||.||||||||||||||||||
Sbjct 1148  -----TTT----------------CAAACACACCTAAGAATGCGCTCTGGAGAAAGACCTTA  1188