Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15207
- Subject:
- NM_001367174.2
- Aligned Length:
- 1096
- Identities:
- 710
- Gaps:
- 287
Alignment
Query 1 ATGAACATCAGAGGTGACACTGGACACAAGGCATGTGAATGTCAGGAATATGGACCAAAGCCATGGAAGAGTCA 74
|||||||||||||||||||.|||.||||||||||..||.|.||||||.||||.|||||||||||..|||.||||
Sbjct 1 ATGAACATCAGAGGTGACATTGGGCACAAGGCATACGAGTATCAGGACTATGCACCAAAGCCATATAAGTGTCA 74
Query 75 ACAACCTAAAAAAGCCTTCAGATATCACCCCTCCTTGAGAACACAAGAAAGGGATCACACTGGAAAGAAACCCT 148
|||||||||.||||||||||||||||||||||||||.|||||||||||||||.|||||||.|||.|||||||||
Sbjct 75 ACAACCTAAGAAAGCCTTCAGATATCACCCCTCCTTTAGAACACAAGAAAGGAATCACACCGGAGAGAAACCCT 148
Query 149 ATGCTTGTAAAGAATGTGGAAAAAACATTATTTACCATTCAAGCATTCAAAGACACATGGTAGTGCACAGTGGG 222
||||||||||||||||||||||||.|.||||||.|||||||.||||||.|||||.|||||||.|||||||||||
Sbjct 149 ATGCTTGTAAAGAATGTGGAAAAACCTTTATTTCCCATTCAGGCATTCGAAGACGCATGGTAATGCACAGTGGG 222
Query 223 GATGGACCTTATAAATGTAAGTTTTGTGGGAAAGCATTCCATTGTCTCAGTTTATATCTTATCCATGAAAGAAC 296
|||||||||||||||||||||||||||||||||||..|||||||||||||.|||||||||||||||||||||||
Sbjct 223 GATGGACCTTATAAATGTAAGTTTTGTGGGAAAGCTGTCCATTGTCTCAGATTATATCTTATCCATGAAAGAAC 296
Query 297 TCACACTGGAGAGAAACCGTATGAATGTAAACAATGTGGTAAATCTTTTAGTTATTCTGCTACCCATCGAATAC 370
||||||||||||||||||||||||||||||||||||||.||||||.||||||||||||||||||||||||||||
Sbjct 297 TCACACTGGAGAGAAACCGTATGAATGTAAACAATGTGTTAAATCCTTTAGTTATTCTGCTACCCATCGAATAC 370
Query 371 ATGAAAGAACTCACATTGGAGAAAAGCCTTATGAATGTCAGGAATGTGGGAAAGCATTCCATAGTCCCAGATCC 444
|||||||||||||||.|||||||||||||||||||||||||.|||||||||||||||||||||||.||||.||.
Sbjct 371 ATGAAAGAACTCACACTGGAGAAAAGCCTTATGAATGTCAGCAATGTGGGAAAGCATTCCATAGTTCCAGTTCT 444
Query 445 TGTCACAGACATGAAAGGAGTCACATGGGAGAGAAGGCTTATCAATGTAAGGAATGTGGAAAAGCATTCATGTG 518
|.|| ||||
Sbjct 445 TTTC---------------------------------------------------------AAGC--------- 452
Query 519 TCCCCGTTATGTTCGTAGACATGAAAGGACCCACTCTAGGAAAAAACTTTATGAATGTAAGCAGTGTGGGAAAG 592
||||.||||.||||||.||.||..|||.|..|||||||||||.||.|||||.||
Sbjct 453 ------------------ACATAAAAGAACCCACACTGGGGGAAAGCCATATGAATGTAAACAATGTGGCAA-- 506
Query 593 CATTATCCTCTCTTACAAGTTTTCAAACACACATAAGAATGCACTCTGGAGAAAGACCTTATGAATGTAAGACA 666
||||| || ||| ||| ||| ||
Sbjct 507 ----ATCCT-TC-----AGT--------------------------TGG----------------TGT----CA 524
Query 667 TGTGGGAAAGGCTTTTATTCTGCCAAGTCATTTCAAAGACATGAAAAAACTCACAGTGGAGAGAAACCGTATAA 740
| ||.|||||||.||||||||.||||||||.|||.|||||.||.|.|.|
Sbjct 525 T--------------------------TCCTTTCAAATACATGAAAGAACTCACACTGGGGAGAAGCCCTGTGA 572
Query 741 ATGCAAGC-AATGTGGTAAAGCCTTCACTCGTTCCGGTTCCT---TTCGATATCATGAAAGGACTCACACTGGA 810
||| .||| |||||..||||||.|||..|.|||.|.|.|||| ||.|| |||.||||||.||||||.|||
Sbjct 573 ATG-TAGCAAATGTAATAAAGCATTCCGTAGTTACAGATCCTATCTTAGA---CATAAAAGGAGTCACACGGGA 642
Query 811 GAGAAACCCTATGAGTGTAAGCAATGTGGGAAAGCCTTCAGATCTGCCCCAAATCTTCAATCGCATGGTAGGAC 884
|||||.||.|||.|.||||||.|||||.|.|||||.||||
Sbjct 643 GAGAAGCCTTATCAATGTAAGGAATGTAGAAAAGCATTCA---------------------------------- 682
Query 885 TCACACTGGAGAGAAACCGTATCAATGTAAGGAATGTGGGAAAGCTTTCAGATCTGCCTCACAACTTCGAATCC 958
|||||| .|||.|| .|||||.|..|
Sbjct 683 -----------------CGTATC------------------------CCAGTTC---------CCTTCGTAGAC 706
Query 959 ATCGTAGGATTCACACTG-GAGAGAAACCCTATGAATGTAAGAAATGTGGGAAAGCCT--TCAGATATGTCCAG 1029
||...||||..|||.||| || |.|||||.||||||||||||.|.|||||||||||.| ||..|||.||
Sbjct 707 ATGAAAGGACCCACTCTGCGA-AAAAACCTTATGAATGTAAGCAGTGTGGGAAAGCATTATCTTATAAGT---- 775
Query 1030 AACTTTCGATTTCATGAAAGGACAAACACACATAAGAATGCACTCTGGAGAAAGACCTTA 1089
||| |||||||||.|||||||||.||||||||||||||||||
Sbjct 776 ---TTT----------------CAAACACACCTAAGAATGCGCTCTGGAGAAAGACCTTA 816