Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15207
- Subject:
- NM_152357.3
- Aligned Length:
- 1788
- Identities:
- 993
- Gaps:
- 702
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGACCCAGTGGCTTTTAAGGATGTGGCTGTGAACTTCACCCAGGAGGAGTGGGCTTTGCTGGATATTTCCCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGGAAACTCTACAGGGAAGTGATGCTGGAAACTTTCAGGAACCTGACCTCTTTAGGAAAAAGGTGGAAAGACC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGAACATTGAATATGAGCACCAAAACCCCAGGAGAAACTTCAGGAGTCTCATAGAAGAAAAAGTCAATGAAATT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAAGATGACAGTCATTGTGGAGAAACTTTTACCCCAGTTCCAGATGACAGACTGAACTTCCAGGAGAAGAAAGC 296
Query 1 ----------------------------------------------------------------------ATGA 4
||||
Sbjct 297 TTCTCCTGAAGTAAAATCATGTGAAAGCTTTGTGTGTGGAGAAGTTGGCCTAGGTAACTCATCTTTTAATATGA 370
Query 5 ACATCAGAGGTGACACTGGACACAAGGCATGTGAATGTCAGGAATATGGACCAAAGCCATGGAAGAGTCAACAA 78
|||||||||||||||.||||||||||||||.|||.|.||||||||||||||||||||||||.|||.||||||||
Sbjct 371 ACATCAGAGGTGACATTGGACACAAGGCATATGAGTATCAGGAATATGGACCAAAGCCATGTAAGTGTCAACAA 444
Query 79 CCTAAAAAAGCCTTCAGATATCACCCCTCCTTGAGAACACAAGAAAGGGATCACACTGGAAAGAAACCCTATGC 152
||||||||||||||||||||.|.|||||||||.|||||||||||||||||||||||||||.||||||||.||||
Sbjct 445 CCTAAAAAAGCCTTCAGATACCGCCCCTCCTTTAGAACACAAGAAAGGGATCACACTGGAGAGAAACCCAATGC 518
Query 153 TTGTAAAGAATGTGGAAAAAACATTATTTACCATTCAAGCATTCAAAGACACATGGTAGTGCACAGTGGGGATG 226
||||||||.|||||||||||.|.||||||.|||||||||..|||.|||||||||||||.|||||||||||||||
Sbjct 519 TTGTAAAGTATGTGGAAAAACCTTTATTTCCCATTCAAGTGTTCGAAGACACATGGTAATGCACAGTGGGGATG 592
Query 227 GACCTTATAAATGTAAGTTTTGTGGGAAAGCATTCCATTGTCTCAGTTTATATCTTATCCATGAAAGAACTCAC 300
||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||.||||
Sbjct 593 GACCTTATAAATGTAAGTTTTGTGGGAAAGCATTCCATTGTCTCAGATTATATCTTATCCATGAAAGAATTCAC 666
Query 301 ACTGGAGAGAAACCGTATGAATGTAAACAATGTGGTAAATCTTTTAGTTATTCTGCTACCCATCGAATACATGA 374
||||||||||||||.|.||||||||||||.|||||||||||.||||||||||||||||||||||||||||||.|
Sbjct 667 ACTGGAGAGAAACCATGTGAATGTAAACAGTGTGGTAAATCCTTTAGTTATTCTGCTACCCATCGAATACATAA 740
Query 375 AAGAACTCACATTGGAGAAAAGCCTTATGAATGTCAGGAATGTGGGAAAGCATTCCATAGTCCCAGATCCTGTC 448
|||||||||||.||||||||||||||||||||.||||||.||||||||||||||.||||||||||||||||.||
Sbjct 741 AAGAACTCACACTGGAGAAAAGCCTTATGAATATCAGGAGTGTGGGAAAGCATTTCATAGTCCCAGATCCTATC 814
Query 449 ACAGACATGAAAGGAGTCACATGGGAGAGAAGGCTTATCAATGTAAGGAATGTGGAAAAGCATTCATGTGTCCC 522
..|||||||||||||.||||||||||||.|||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 815 GTAGACATGAAAGGATTCACATGGGAGAAAAGGCTTATCAATGTAAGGAATGTGGAAAAGCATTCACGTGTCCC 888
Query 523 CGTTATGTTCGTAGACATGAAAGGACCCACTCTAGGAAAAAACTTTATGAATGTAAGCAGTGTGGGAAAGCATT 596
|||||||||||||.|||||||||||||||||||||||||||.||.|||||||||||||||||||||||||||||
Sbjct 889 CGTTATGTTCGTATACATGAAAGGACCCACTCTAGGAAAAATCTCTATGAATGTAAGCAGTGTGGGAAAGCATT 962
Query 597 ATCCTCTCTTACAAGTTTTCAAACACACATAAGAATGCACTCTGGAGAAAGACCTTATGAATGTAAGACATGTG 670
||||||||||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||.|||||
Sbjct 963 ATCCTCTCTTACAAGTTTTCAAACACACGTAAGATTGCACTCTGGAGAAAGACCTTATGAATGTAAGATATGTG 1036
Query 671 GGAAAGGCTTTTATTCTGCCAAGTCATTTCAAAGACATGAAAAAACTCACAGTGGAGAGAAACCGTATAAATGC 744
|.||||.|||||.|||||..||.||||||||||||||||||||||.||||||||||||||||||.||||||||.
Sbjct 1037 GAAAAGACTTTTGTTCTGTGAATTCATTTCAAAGACATGAAAAAATTCACAGTGGAGAGAAACCCTATAAATGT 1110
Query 745 AAGCAATGTGGTAAAGCCTTCACTCGTTCCGGTTCCTTTCGATATCATGAAAGGACTCACACTGGAGAGAAACC 818
|||||.|||||||||||||||.|||.||||.|||||.|||||||||||||||||||||||||||||||||||||
Sbjct 1111 AAGCAGTGTGGTAAAGCCTTCCCTCATTCCAGTTCCCTTCGATATCATGAAAGGACTCACACTGGAGAGAAACC 1184
Query 819 CTATGAGTGTAAGCAATGTGGGAAAGCCTTCAGATCTGCCCCAAATCTTCAATCGCATGGTAGGACTCACACTG 892
||||||||||||||||||||||||||||||||||||||||.||.|.||||.|..||||||||||||||||||||
Sbjct 1185 CTATGAGTGTAAGCAATGTGGGAAAGCCTTCAGATCTGCCTCACACCTTCGAGTGCATGGTAGGACTCACACTG 1258
Query 893 GAGAGAAACCGTATCAATGTAAGGAATGTGGGAAAGCTTTCAGATCTG-------CCT---------------- 943
||||||||||||||.||||||||||||||||||||||.|||||||.|| |||
Sbjct 1259 GAGAGAAACCGTATGAATGTAAGGAATGTGGGAAAGCCTTCAGATATGTGAATAACCTTCAAAGTCATGAAAGG 1332
Query 944 -------CACAACTTCGAATCCA-TC--------------------GTAGGAT--------------------- 968
||||..|..||||.|| || |||.|||
Sbjct 1333 ACACAAACACACATAAGAATACACTCTGGAGAAAGACGTTATAAATGTAAGATATGTGGGAAAGGCTTTTATTG 1406
Query 969 ------------------------------TCACACTGGAGAGAAACCCTATGAATGTAAGAAATGT--GGGAA 1010
|||||||||||||||||.|||||||||.|||.||.|| .|.|.
Sbjct 1407 TCCCAAATCATTTCAAAGACATGAAAAAACTCACACTGGAGAGAAACTCTATGAATGCAAGCAACGTTCAGTAG 1480
Query 1011 AGCCTTCAGATATGTCCAG-AACTTTCGATTTCATGAAAGGACAAACAC---ACATAAG-------AAT----G 1069
..||||||| ||..||||| ..||||.|||.||||||||||||..|||| |.|.||| ||| |
Sbjct 1481 TTCCTTCAG-TAGTTCCAGTTCCTTTTGATATCATGAAAGGACTCACACTGGAGAGAAGCCCTATAAATGCGAG 1553
Query 1070 CACTCTGGAGAAAGACCTTA------------------------------------------------------ 1089
||.|.||| ||||| ||||.
Sbjct 1554 CAATGTGG-GAAAG-CCTTCAGAGCTGTGTCAATCCTTTGAATGCATGGTAGGACTCACCCTGAAGAGAAACCC 1625
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1626 TATGAGTGTGAGCAATGACGGAAAGCCTTCAGATCTGCCCCACACCTTTGAATACGTGGTAGGACACACAATGG 1699
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1700 AGAGAAGCCCTATGCATGTAAGGAATGTGGGAAACCCTTCGGATCTGCCCAGAACCTTCGAATTCATGAAAGGA 1773
Query 1090 ------------ 1089
Sbjct 1774 CACAAACACACA 1785
