Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15207
- Subject:
- XM_005259731.4
- Aligned Length:
- 1797
- Identities:
- 993
- Gaps:
- 711
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGATGTTTCAGGACCCAGTGGCTTTTAAGGATGTGGCTGTGAACTTCACCCAGGAGGAGTGGGCTTTGCTGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TATTTCCCAGAGGAAACTCTACAGGGAAGTGATGCTGGAAACTTTCAGGAACCTGACCTCTTTAGGAAAAAGGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGAAAGACCAGAACATTGAATATGAGCACCAAAACCCCAGGAGAAACTTCAGGAGTCTCATAGAAGAAAAAGTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AATGAAATTAAAGATGACAGTCATTGTGGAGAAACTTTTACCCCAGTTCCAGATGACAGACTGAACTTCCAGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAAGAAAGCTTCTCCTGAAGTAAAATCATGTGAAAGCTTTGTGTGTGGAGAAGTTGGCCTAGGTAACTCATCTT 370
Query 1 -----ATGAACATCAGAGGTGACACTGGACACAAGGCATGTGAATGTCAGGAATATGGACCAAAGCCATGGAAG 69
|||||||||||||||||||.||||||||||||||.|||.|.||||||||||||||||||||||||.|||
Sbjct 371 TTAATATGAACATCAGAGGTGACATTGGACACAAGGCATATGAGTATCAGGAATATGGACCAAAGCCATGTAAG 444
Query 70 AGTCAACAACCTAAAAAAGCCTTCAGATATCACCCCTCCTTGAGAACACAAGAAAGGGATCACACTGGAAAGAA 143
.||||||||||||||||||||||||||||.|.|||||||||.|||||||||||||||||||||||||||.||||
Sbjct 445 TGTCAACAACCTAAAAAAGCCTTCAGATACCGCCCCTCCTTTAGAACACAAGAAAGGGATCACACTGGAGAGAA 518
Query 144 ACCCTATGCTTGTAAAGAATGTGGAAAAAACATTATTTACCATTCAAGCATTCAAAGACACATGGTAGTGCACA 217
||||.||||||||||||.|||||||||||.|.||||||.|||||||||..|||.|||||||||||||.||||||
Sbjct 519 ACCCAATGCTTGTAAAGTATGTGGAAAAACCTTTATTTCCCATTCAAGTGTTCGAAGACACATGGTAATGCACA 592
Query 218 GTGGGGATGGACCTTATAAATGTAAGTTTTGTGGGAAAGCATTCCATTGTCTCAGTTTATATCTTATCCATGAA 291
|||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 593 GTGGGGATGGACCTTATAAATGTAAGTTTTGTGGGAAAGCATTCCATTGTCTCAGATTATATCTTATCCATGAA 666
Query 292 AGAACTCACACTGGAGAGAAACCGTATGAATGTAAACAATGTGGTAAATCTTTTAGTTATTCTGCTACCCATCG 365
||||.||||||||||||||||||.|.||||||||||||.|||||||||||.|||||||||||||||||||||||
Sbjct 667 AGAATTCACACTGGAGAGAAACCATGTGAATGTAAACAGTGTGGTAAATCCTTTAGTTATTCTGCTACCCATCG 740
Query 366 AATACATGAAAGAACTCACATTGGAGAAAAGCCTTATGAATGTCAGGAATGTGGGAAAGCATTCCATAGTCCCA 439
|||||||.||||||||||||.||||||||||||||||||||.||||||.||||||||||||||.||||||||||
Sbjct 741 AATACATAAAAGAACTCACACTGGAGAAAAGCCTTATGAATATCAGGAGTGTGGGAAAGCATTTCATAGTCCCA 814
Query 440 GATCCTGTCACAGACATGAAAGGAGTCACATGGGAGAGAAGGCTTATCAATGTAAGGAATGTGGAAAAGCATTC 513
||||||.||..|||||||||||||.||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 815 GATCCTATCGTAGACATGAAAGGATTCACATGGGAGAAAAGGCTTATCAATGTAAGGAATGTGGAAAAGCATTC 888
Query 514 ATGTGTCCCCGTTATGTTCGTAGACATGAAAGGACCCACTCTAGGAAAAAACTTTATGAATGTAAGCAGTGTGG 587
|.||||||||||||||||||||.|||||||||||||||||||||||||||.||.||||||||||||||||||||
Sbjct 889 ACGTGTCCCCGTTATGTTCGTATACATGAAAGGACCCACTCTAGGAAAAATCTCTATGAATGTAAGCAGTGTGG 962
Query 588 GAAAGCATTATCCTCTCTTACAAGTTTTCAAACACACATAAGAATGCACTCTGGAGAAAGACCTTATGAATGTA 661
|||||||||||||||||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||
Sbjct 963 GAAAGCATTATCCTCTCTTACAAGTTTTCAAACACACGTAAGATTGCACTCTGGAGAAAGACCTTATGAATGTA 1036
Query 662 AGACATGTGGGAAAGGCTTTTATTCTGCCAAGTCATTTCAAAGACATGAAAAAACTCACAGTGGAGAGAAACCG 735
|||.||||||.||||.|||||.|||||..||.||||||||||||||||||||||.||||||||||||||||||.
Sbjct 1037 AGATATGTGGAAAAGACTTTTGTTCTGTGAATTCATTTCAAAGACATGAAAAAATTCACAGTGGAGAGAAACCC 1110
Query 736 TATAAATGCAAGCAATGTGGTAAAGCCTTCACTCGTTCCGGTTCCTTTCGATATCATGAAAGGACTCACACTGG 809
||||||||.|||||.|||||||||||||||.|||.||||.|||||.||||||||||||||||||||||||||||
Sbjct 1111 TATAAATGTAAGCAGTGTGGTAAAGCCTTCCCTCATTCCAGTTCCCTTCGATATCATGAAAGGACTCACACTGG 1184
Query 810 AGAGAAACCCTATGAGTGTAAGCAATGTGGGAAAGCCTTCAGATCTGCCCCAAATCTTCAATCGCATGGTAGGA 883
|||||||||||||||||||||||||||||||||||||||||||||||||.||.|.||||.|..|||||||||||
Sbjct 1185 AGAGAAACCCTATGAGTGTAAGCAATGTGGGAAAGCCTTCAGATCTGCCTCACACCTTCGAGTGCATGGTAGGA 1258
Query 884 CTCACACTGGAGAGAAACCGTATCAATGTAAGGAATGTGGGAAAGCTTTCAGATCTG-------CCT------- 943
|||||||||||||||||||||||.||||||||||||||||||||||.|||||||.|| |||
Sbjct 1259 CTCACACTGGAGAGAAACCGTATGAATGTAAGGAATGTGGGAAAGCCTTCAGATATGTGAATAACCTTCAAAGT 1332
Query 944 ----------------CACAACTTCGAATCCA-TC--------------------GTAGGAT------------ 968
||||..|..||||.|| || |||.|||
Sbjct 1333 CATGAAAGGACACAAACACACATAAGAATACACTCTGGAGAAAGACGTTATAAATGTAAGATATGTGGGAAAGG 1406
Query 969 ---------------------------------------TCACACTGGAGAGAAACCCTATGAATGTAAGAAAT 1003
|||||||||||||||||.|||||||||.|||.||.
Sbjct 1407 CTTTTATTGTCCCAAATCATTTCAAAGACATGAAAAAACTCACACTGGAGAGAAACTCTATGAATGCAAGCAAC 1480
Query 1004 GT--GGGAAAGCCTTCAGATATGTCCAG-AACTTTCGATTTCATGAAAGGACAAACAC---ACATAAG------ 1065
|| .|.|...||||||| ||..||||| ..||||.|||.||||||||||||..|||| |.|.|||
Sbjct 1481 GTTCAGTAGTTCCTTCAG-TAGTTCCAGTTCCTTTTGATATCATGAAAGGACTCACACTGGAGAGAAGCCCTAT 1553
Query 1066 -AAT----GCACTCTGGAGAAAGACCTTA--------------------------------------------- 1089
||| |||.|.||| ||||| ||||.
Sbjct 1554 AAATGCGAGCAATGTGG-GAAAG-CCTTCAGAGCTGTGTCAATCCTTTGAATGCATGGTAGGACTCACCCTGAA 1625
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1626 GAGAAACCCTATGAGTGTGAGCAATGACGGAAAGCCTTCAGATCTGCCCCACACCTTTGAATACGTGGTAGGAC 1699
Query 1090 -------------------------------------------------------------------------- 1089
Sbjct 1700 ACACAATGGAGAGAAGCCCTATGCATGTAAGGAATGTGGGAAACCCTTCGGATCTGCCCAGAACCTTCGAATTC 1773
Query 1090 --------------------- 1089
Sbjct 1774 ATGAAAGGACACAAACACACA 1794
