Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15236
- Subject:
- NM_001367172.2
- Aligned Length:
- 1794
- Identities:
- 1053
- Gaps:
- 621
Alignment
Query 1 ATGGACCCAGTGGCTTTTAAGGATGTGGCTGTGAACTTCACCCAGGAGGAGTGGGCTTTGCTGGATATTTCCCA 74
||||||||.|||||.|.|.|||||||.||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 1 ATGGACCCTGTGGCCTGTGAGGATGTTGCTGTGAACTTCACCCAGGAGGAGTGGGCTTTGCTGGATATTTCGCA 74
Query 75 GAGGAAACTCTACAGGGAAGTGATGCTGGAAACTTTCAGGAACCTGACCTCTTTAGGAAAAAGGTGGAAAGACC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||.||||.||||.|||||||||||
Sbjct 75 GAGGAAACTCTACAGGGAAGTGATGCTGGAAACTTTCAGGAACCTGACCTCTATAGGGAAAAAGTGGAAAGACC 148
Query 149 AGAACATTGAATATGAGCACCAAAACCCCAGGAGAAACTTCAGGAGTCTCATAGAAGAAAAAGTCAATGAAATT 222
|||||||||||||||||.|||||||||||||||||||||||||||||||||||||||..||.||||||||||||
Sbjct 149 AGAACATTGAATATGAGTACCAAAACCCCAGGAGAAACTTCAGGAGTCTCATAGAAGGGAATGTCAATGAAATT 222
Query 223 AAAGATGACAGTCATTGTGGAGAAACTTTTACCCCAGTTCCAGATGACAGACTGAACTTCCAGGAGAAGAAAGC 296
|||||.||||||||||||||||||||||||||||..||||||||||||||.|||||||||||||||||||||||
Sbjct 223 AAAGAAGACAGTCATTGTGGAGAAACTTTTACCCAGGTTCCAGATGACAGGCTGAACTTCCAGGAGAAGAAAGC 296
Query 297 TTCTCCTGAAGTAAAATCATGTGAAAGCTTTGTGTGTGGAGAAGTTGGCCTAGGTAACTCATCTTTTAATATGA 370
|||||||||||.||||||||||||.|.||||||.|||||||||||||||.||||||||||||||||||||||||
Sbjct 297 TTCTCCTGAAGCAAAATCATGTGATAACTTTGTATGTGGAGAAGTTGGCATAGGTAACTCATCTTTTAATATGA 370
Query 371 ACATCAGAGGTGACATTGGACACAAGGCATATGAGTATCAGGAATATGGACCAAAGCCATGTAAGTGTCAACAA 444
|||||||||||||||||||.|||||||||||.|||||||||||.||||.|||||||||||.|||||||||||||
Sbjct 371 ACATCAGAGGTGACATTGGGCACAAGGCATACGAGTATCAGGACTATGCACCAAAGCCATATAAGTGTCAACAA 444
Query 445 CCTAAAAAAGCCTTCAGATACCGCCCCTCCTTTAGAACACAAGAAAGGGATCACACTGGAGAGAAACCCAATGC 518
|||||.||||||||||||||.|.|||||||||||||||||||||||||.|||||||.||||||||||||.||||
Sbjct 445 CCTAAGAAAGCCTTCAGATATCACCCCTCCTTTAGAACACAAGAAAGGAATCACACCGGAGAGAAACCCTATGC 518
Query 519 TTGTAAAGTATGTGGAAAAACCTTTATTTCCCATTCAAGTGTTCGAAGACACATGGTAATGCACAGTGGGGATG 592
||||||||.||||||||||||||||||||||||||||.|..|||||||||.|||||||||||||||||||||||
Sbjct 519 TTGTAAAGAATGTGGAAAAACCTTTATTTCCCATTCAGGCATTCGAAGACGCATGGTAATGCACAGTGGGGATG 592
Query 593 GACCTTATAAATGTAAGTTTTGTGGGAAAGCATTCCATTGTCTCAGATTATATCTTATCCATGAAAGAATTCAC 666
|||||||||||||||||||||||||||||||..||||||||||||||||||||||||||||||||||||.||||
Sbjct 593 GACCTTATAAATGTAAGTTTTGTGGGAAAGCTGTCCATTGTCTCAGATTATATCTTATCCATGAAAGAACTCAC 666
Query 667 ACTGGAGAGAAACCATGTGAATGTAAACAGTGTGGTAAATCCTTTAGTTATTCTGCTACCCATCGAATACATAA 740
||||||||||||||.|.||||||||||||.||||.|||||||||||||||||||||||||||||||||||||.|
Sbjct 667 ACTGGAGAGAAACCGTATGAATGTAAACAATGTGTTAAATCCTTTAGTTATTCTGCTACCCATCGAATACATGA 740
Query 741 AAGAACTCACACTGGAGAAAAGCCTTATGAATATCAGGAGTGTGGGAAAGCATTTCATAGTCCCAGATCCTATC 814
||||||||||||||||||||||||||||||||.||||.|.||||||||||||||.||||||.||||.||.|.||
Sbjct 741 AAGAACTCACACTGGAGAAAAGCCTTATGAATGTCAGCAATGTGGGAAAGCATTCCATAGTTCCAGTTCTTTTC 814
Query 815 GTAGACATGAAAGGATTCACATGGGAGAAAAGGCTTATCAATGTAAGGAATGTGGAAAAGCATTCACGTGTCCC 888
||||
Sbjct 815 ---------------------------------------------------------AAGC------------- 818
Query 889 CGTTATGTTCGTATACATGAAAGGACCCACTCTAGGAAAAATCTCTATGAATGTAAGCAGTGTGGGAAAGCATT 962
||||.||||.||||||.||.||..|||.|..|||||||||||.||.|||||.||
Sbjct 819 --------------ACATAAAAGAACCCACACTGGGGGAAAGCCATATGAATGTAAACAATGTGGCAA------ 872
Query 963 ATCCTCTCTTACAAGTTTTCAAACACACGTAAGATTGCACTCTGGAGAAAGACCTTATGAATGTAAGATATGTG 1036
||||| || ||| ||| |||
Sbjct 873 ATCCT-TC-----AGT--------------------------TGG----------------TGT---------- 888
Query 1037 GAAAAGACTTTTGTTCTGTGAATTCATTTCAAAGACATGAAAAAATTCACAGTGGAGAGAAACCCTATAAATGT 1110
.||||.|||||||.||||||||.||.|||||.|||.|||||.||||.|.|||||
Sbjct 889 --------------------CATTCCTTTCAAATACATGAAAGAACTCACACTGGGGAGAAGCCCTGTGAATGT 942
Query 1111 AAGC-AGTGTGGTAAAGCCTTCCCTCATTCCAGTTCC---CTTCGATATCATGAAAGGACTCACACTGGAGAGA 1180
||| |.|||..||||||.||||.|..||.|||.||| |||.|| |||.||||||.||||||.|||||||
Sbjct 943 -AGCAAATGTAATAAAGCATTCCGTAGTTACAGATCCTATCTTAGA---CATAAAAGGAGTCACACGGGAGAGA 1012
Query 1181 AACCCTATGAGTGTAAGCAATGTGGGAAAGCCTTCAGATCTGCC---TCACACCTTCG-AGTGCATGGTAGGAC 1250
|.||.|||.|.||||||.|||||.|.|||||.||||..|.|.|| || |||||| || .||||..|||||
Sbjct 1013 AGCCTTATCAATGTAAGGAATGTAGAAAAGCATTCACGTATCCCAGTTC---CCTTCGTAG-ACATGAAAGGAC 1082
Query 1251 TCACACTG-GAGAGAAACCGTATGAATGTAAGGAATGTGGGAAAGCCTTCAGATATGTGAATAACCTTCAAAGT 1323
.|||.||| || |.|||||.||||||||||||.|.||||||||||| ||.|.|||..||||
Sbjct 1083 CCACTCTGCGA-AAAAACCTTATGAATGTAAGCAGTGTGGGAAAGC--------------ATTATCTTATAAGT 1141
Query 1324 CATGAAAGGACACAAACACACATAAGAATACACTCTGGAGAAAGACGTTATAAATGTAAGATATGTGGGAAAGG 1397
..| |||||||||.|||||||.|.||||||||||||||.|||
Sbjct 1142 TTT---------CAAACACACCTAAGAATGCGCTCTGGAGAAAGACCTTA------------------------ 1182
Query 1398 CTTTTATTGTCCCAAATCATTTCAAAGACATGAAAAAACTCACACTGGAGAGAAACTCTATGAATGCAAGCAAC 1471
Sbjct 1183 -------------------------------------------------------------------------- 1182
Query 1472 GTTCAGTAGTTCCTTCAGTAGTTCCAGTTCCTTTTGATATCATGAAAGGACTCACACTGGAGAGAAGCCCTATA 1545
Sbjct 1183 -------------------------------------------------------------------------- 1182
Query 1546 AATGCGAGCAATGTGGGAAAGCCTTCAGAGCTGTGTCAATCCTTTGAATGCATGGTAGGACTCACCCTGAAGAG 1619
Sbjct 1183 -------------------------------------------------------------------------- 1182
Query 1620 AAACCCTATGAGTGTGAGCAATGACGGAAAGCCTTCAGATCTGCCCCACACCTTTGAATACGTGGTAGGACACA 1693
Sbjct 1183 -------------------------------------------------------------------------- 1182
Query 1694 CAATGGAGAGAAGCCCTATGCATGTAAGGAATGTGGGAAACCCTTCGGATCTGCCCATAACCTTCAAAGTCATG 1767
Sbjct 1183 -------------------------------------------------------------------------- 1182
Query 1768 AAAGGACACAAACACACA 1785
Sbjct 1183 ------------------ 1182
