Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_15246
• Subject: XM_011249271.2
• Aligned Length: 1196
• Identities: 923
• Gaps: 142

Alignment

Query    1  ATGGAGGAGCGGGAGCGGGCCCGNGGGGCGAGGTCGGCTGGCGCCGGGAGCCCCGCGCGCCCGCCCAGCCCGCG  74
            |||||||||||.|||.||      |||||||||||||||.|||||||.|||||.||..||||||||||||||||
Sbjct    1  ATGGAGGAGCGCGAGTGG------GGGGCGAGGTCGGCTCGCGCCGGCAGCCCAGCCAGCCCGCCCAGCCCGCG  68

Query   75  GCTGGATGTCAGCTCTGACAGCTTCGACCCGCTGCTGGCCCTGTACGCGCCCCGCCTGCCTCCCATTCCCTACC  148
            ||||||.||||||||..|||||||||||||||||||||||.|||||||.||.||||||||.|||||||||||||
Sbjct   69  GCTGGACGTCAGCTCCTACAGCTTCGACCCGCTGCTGGCCTTGTACGCACCTCGCCTGCCGCCCATTCCCTACC  142

Query  149  CCAATGCCCCCTGCTTCAACAACGTGGCGGAGTACGAGAGCTTCCTCAGGACCGGAGTCCGGGGCGGCGGGCG-  221
            ||||.||.||||||||||||||||||||||||||||||||||||||.|.|               |||||||| 
Sbjct  143  CCAACGCGCCCTGCTTCAACAACGTGGCGGAGTACGAGAGCTTCCTGAAG---------------GGCGGGCGC  201

Query  222  --CGGGCGCGGGCGGGCTCGGGGCGCGGCCG---CGGGCTCTG-GGGTTC--CCGCCG-------CAC-----C  275
              |||||||||.||||||||||||.|||..|   |||.|||.| |||..|  ||.|||       |||     |
Sbjct  202  ACCGGGCGCGGTCGGGCTCGGGGCACGGGGGAGCCGGCCTCGGCGGGAACCTCCACCGGAACCTCCACGGGAGC  275

Query  276  CGGGCCCTCGGGCAGGACTCGTCGCCGCCCGGACGCGCCCGCCCCGGACCCCGAGCGCATCCAGCGCCTCCGCC  349
            ||||..||||..||||.|.|||||||||   |.|||||||.|||||||.||||||||||||||||||||.||||
Sbjct  276  CGGGAGCTCGTCCAGGGCCCGTCGCCGC---GCCGCGCCCACCCCGGATCCCGAGCGCATCCAGCGCCTGCGCC  346

Query  350  GTCTCATGGTGGCCAAAGAGGAAGGGGACGGGGGAGCGGGAGCGGGCCGGAGGGGTCCGGGTCGGAGCAGGAAG  423
            |.||||||||||.|||.|||||...||||||....||.||||||.|.||...|||.|||||.||.||||.||||
Sbjct  347  GGCTCATGGTGGTCAAGGAGGACACGGACGGCACGGCCGGAGCGCGACGCCAGGGCCCGGGGCGCAGCAAGAAG  420

Query  424  GCGCCACGCAACGTGCTCACGCGAATGCCCTTGCACGAAGGCAGCCCTCTGGGTGAACTCCATCGCTGTATCCG  497
            ||.||.|||||.|||||.|||||.|||||.|||||.|||||.|||||||||||||||||.||.|||||.|||||
Sbjct  421  GCACCCCGCAATGTGCTTACGCGGATGCCTTTGCATGAAGGTAGCCCTCTGGGTGAACTGCACCGCTGCATCCG  494

Query  498  TGAGGGGGTGAAGGTGAATGTTCACATCCGCACTTTCAAGGGACTTCGGGGCGTCTGTACAGGCTTCCTTGTTG  571
            .|||||.||.||||||||.||||||||||||||.|||||||||||.||.||.|||||.||.||||||||.||.|
Sbjct  495  AGAGGGAGTCAAGGTGAACGTTCACATCCGCACCTTCAAGGGACTCCGCGGTGTCTGCACTGGCTTCCTCGTCG  568

Query  572  CATTCGACAAGTTCTGGAATATGGCACTTACTGATGTGGATGAGACCTACCGAAAACCTGTCCTAGGCAAAGCA  645
            |.|||||||||||||||||||||||.||.|||||.|||||||||||||||||.|||||||||.||||.||||||
Sbjct  569  CCTTCGACAAGTTCTGGAATATGGCCCTCACTGACGTGGATGAGACCTACCGTAAACCTGTCTTAGGAAAAGCA  642

Query  646  TATGAACGGGATTCTTCACTGACTCTCACTAGGCTATTTGATCGGCTGAAACTTCAAGATTCCTCCAAGAAGGA  719
            ||.||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct  643  TACGAACGGGATTCTTCGCTGACTCTCACTAGGCTATTTGATCGGCTGAAACTTCAAGATTCCTCCAAAAAGGA  716

Query  720  AGCAGATTCTAAGTCTGCAGTTGAAGATTCCACTCTGTCTAGATACTCACAGACATCCACTTGGAAGTTGGCTT  793
            |||.|||||.||.|||||||||||.||.|||||.||||||.|||||||.||.|||||.|||||||||.||||||
Sbjct  717  AGCGGATTCCAAATCTGCAGTTGAGGACTCCACCCTGTCTCGATACTCCCAAACATCTACTTGGAAGGTGGCTT  790

Query  794  CAGTGTGGGGAAGAGCAGACACTGGCCGGGGCTCACACAAGCGTTCCCGCTCTGTCCCTTCTTCCCTGCAGGCC  867
            |.||.||||||.|||..|||||||.||||.|||||||||.|||.||||||||.||||||||||||||||||||.
Sbjct  791  CGGTATGGGGACGAGGGGACACTGACCGGAGCTCACACAGGCGCTCCCGCTCCGTCCCTTCTTCCCTGCAGGCA  864

Query  868  TCTGCAAGGGAGGAGTCCAGGTCAGAGCTGTCAGGGAGGACTACACGGACAGACGGCTCCAGTGTGGGAGGTAC  941
            |||||||||||||||||||||||.|||||||||||||||||||||||||||||.||.|||||||||||||||||
Sbjct  865  TCTGCAAGGGAGGAGTCCAGGTCTGAGCTGTCAGGGAGGACTACACGGACAGAAGGGTCCAGTGTGGGAGGTAC  938

Query  942  CTTTTCCAGGGCTACCACCCTTTCCAGAGGCCAGTCCCGTAAGAAAAAGCGAAAGCCCAAAGTGGATTACCAGC  1015
            |||.||||||||.|||||||||||..|.||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct  939  CTTCTCCAGGGCCACCACCCTTTCACGGGGCCAGTCCCGTAAGAAAAAGCGAAAGCCCAAGGTGGATTACCAGC  1012

Query 1016  AG---------------GTATTC---------------ACTCGACACATAAA-------------TCAGA----  1042
            ||               ||.|||               .|||    ||.|||             |||||    
Sbjct 1013  AGCCTTCATCAGAGGCTGTTTTCCATGATCTGGTCCTTCCTC----CAGAAAGAAGCAGGAGTTCTCAGAGGAA  1082

Query 1043  ------TTTTCATTCGAGGCGAGAA----------TGTC--CTGCTGGT--TCATC-----------TTGCACA  1085
                  .||.|| ||.||  |||||          ||||  |.||||.|  .||||           ||.|| |
Sbjct 1083  CACGTCCTTCCA-TCCAG--GAGAAAGTGACTTTCTGTCTGCGGCTGCTCCACATCCCGGGCCTGCTTTTCA-A  1152

Query 1086  G-----------  1086
            |           
Sbjct 1153  GGGTATCTGTTC  1164