Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15298
- Subject:
- XR_428160.3
- Aligned Length:
- 2342
- Identities:
- 193
- Gaps:
- 2148
Alignment
Query 1 ATGGAGAAGTACGAGCGGATCCGAGTGGTGGGGAGAGGTGCCTTCGGGATTGTGCACCTGTGCCTGCGAAAGGC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TGACCAGAAGCTGGTGATCATCAAGCAGATTCCAGTGGAACAGATGACCAAGGAAGAGCGGCAGGCAGCCCAGA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ATGAGTGCCAGGTCCTCAAGCTGCTCAACCACCCCAATGTCATTGAGTACTACGAGAACTTCCTGGAAGACAAA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GCCCTTATGATCGCCATGGAATATGCACCAGGCGGCACTCTGGCTGAGTTCATCCAAAAGCGCTGTAATTCCCT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GCTGGAGGAGGAGACCATCCTGCACTTCTTCGTGCAGATCCTGCTTGCACTGCATCATGTGCACACCCACCTCA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TCCTGCACCGAGACCTCAAGACCCAGAACATCCTGCTTGACAAACACCGCATGGTCGTCAAGATCGGTGATTTC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GGCATCTCCAAGATCCTTAGCAGCAAGAGCAAGGCCTACACGGTGGTGGGTACCCCATGCTATATCTCCCCTGA 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 GCTGTGTGAGGGCAAGCCCTACAACCAGAAGAGTGACATCTGGGCCCTGGGCTGTGTCCTCTACGAGCTGGCCA 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GCCTCAAGAGGGCTTTCGAGGCTGCGAACTTGCCAGCACTGGTGCTGAAGATCATGAGTGGCACCTTTGCACCT 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 ATCTCTGACCGGTACAGCCCTGAGCTTCGCCAGCTGGTCCTGAGTCTACTCAGCCTGGAGCCTGCCCAGCGGCC 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 ACCACTCAGCCACATCATGGCACAGCCCCTCTGCATCCGTGCCCTCCTCAACCTCCACACCGACGTGGGCAGTG 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 TCCGCATGCGGAGGGCAGAGAAGTCCGTGGCCCCCAGCAACACAGGGAGCAGGACCACCAGTGTCCGCTGCAGA 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 GGTATCCCCCGGGGACCTGTGAGGCCAGCCATCCCACCACCACTGTCGTCAGTGTATGCCTGGGGTGGTGGGCT 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 GGGCACCCCCCTGCGGCTGCCAATGCTCAACACAGAGGTGGTCCAGGTGGCAGCTGGGCGCACGCAGAAAGCCG 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 GCGTCACGCGCTCTGGGCGTCTCATCCTGTGGGAGGCCCCACCCCTAGGTGCAGGCGGAGGCAGTCTCCTTCCT 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 GGGGCAGTGGAGCAGCCACAGCCCCAGTTCATCTCGCGTTTCCTGGAGGGCCAGTCGGGTGTGACCATCAAGCA 1184
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1185 CGTGGCCTGTGGGGACTTCTTCACTGCCTGCCTGACTGACAGAGGCATCATCATGACATTCGGCAGCGGCAGCA 1258
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1259 ATGGGTGCCTAGGCCATGGCAGCCTCACTGACATCAGCCAGCCCACCATTGTGGAGGCTTTGCTGGGCTATGAA 1332
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1333 ATGGTGCAGGTGGCCTGTGGGGCCTCTCACGTGCTGGCCCTGTCCACTGAGCGAGAACTATTTGCCTGGGGCCG 1406
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1407 TGGAGACAGCGGCAGACTGGGGCTAGGCACCAGGGAGTCCCACAGCTGCCCCCAGCAGGTGCCCATGCCCCCAG 1480
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1481 GACAGGAAGCTCAGCGAGTTGTATGTGGTATCGATTCCTCCATGATCCTCACTGTGCCTGGCCAAGCCCTAGCC 1554
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1555 TGTGGGAGAAACATCCCAGTCCCGACGATGCAACACGACTGGCCAGTATTAAGCCTGGGCCCCAAATAATGATT 1628
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1629 TTATTTTGACTGATAGTGACCTGTTCGTTGCAACAAATTGATGAGCAATGCTTTTTTATAATGCCAACTTTGTA 1702
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1703 CTATGATTTTATTTTGACTGATANNNANNTNNNCNNCATGGCTTTTTGCCCGCCGTGGCTTNNAACAAATTGAT 1776
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1777 GAGCAATGCTTTTTTATAATGCCAACTTTGTACAAAAAAGTTGGCACCATGGCTTTTTGCCCGCCGTGGCTTTT 1850
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1851 TCCCCCCGCCGCCGCGGCTTTTTGTGGGTTTGTTTTTTTTTGCCGCCGCGGCTTTTTGCCCCGCCGCCGCCGCT 1924
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1925 TTTTGCCGCCGCGGCTTTTTACCCCCGCCGCCGAGGATTTTTGCCCCCGCCGCCGCGGCTCTGAGGGCGGGAGC 1998
||
Sbjct 1 ------------------------------------------------------------------------GC 2
Query 1999 GGCACACTCGGCTGCCAGCTCCACTGGCGTTCTGGCAAGGGCAGCGCGGAGGGGCGCTCCTGGTCCAGCTCTCC 2072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3 GGCACACTCGGCTGCCAGCTCCACTGGCGTTCTGGCAAGGGCAGCGCGGAGGGGCGCTCCTGGTCCAGCTCTCC 76
Query 2073 CTGCTCGGGAGTGTATGAATGCTTTGTGTTCTGACAAAGAGACTGTAGCTCCCATGTCCTACCTGCTTGGTTGC 2146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 77 CTGCTCGGGAGTGTATGAATGCTTTGTGTTCTGACAAAGAGACTGTAGCTCCCATGTCCTACCTGCTTGGTTGC 150
Query 2147 ATTGCCAGTGCCCACGTCATTGCTTATTTAAAATCTACAACTGC------------------------------ 2190
|||||||||||||||||||||||||.||||||||||||||||||
Sbjct 151 ATTGCCAGTGCCCACGTCATTGCTTGTTTAAAATCTACAACTGCTGACGTTTTGTAACCTTCGCATTCCAGATA 224
Query 2191 -------------------------------------------------------------------------- 2190
Sbjct 225 CAACAGAGAAATGCATAATGTCCAGTGAATTTATTAAAGTTCCAAAGTCGGTCGCGCGCAGTGGCTCACGCCTG 298
Query 2191 ------------------------------------------------ 2190
Sbjct 299 TAATCTCAACACTTCGGGAGGCCGAGGCGTGTGGATCACGAGGTCAGG 346
