Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15307
- Subject:
- XM_011535068.2
- Aligned Length:
- 2269
- Identities:
- 1221
- Gaps:
- 1044
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGTTTCGGCCTGGGGCGGCGGGGGCGGCCCAGAAAAGGCCTAGCGTCCTGGGCTGTGTGGGTGTAGCGTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGGGCGCGTCGGTCTCTATGGCAACGCTCCACACGCGGAGGTCGGGTACGGTTATCTGTGGCCACAAAGAAAG 148
Query 1 --------------------------------------------------------------------ATGGAT 6
||||||
Sbjct 149 TTATTTGTCTCTGTCTTGGCAAGGCTGGGAGGAAAGTTTTAGCTAAGAAACTCAGCCCATTGGAGACCATGGAT 222
Query 7 AAGTACGATGTGATTAAGGCCATCGGGCAAGGTGCCTTCGGGAAAGCATACTTAGCTAAAGGGAAATCAGATAG 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AAGTACGATGTGATTAAGGCCATCGGGCAAGGTGCCTTCGGGAAAGCATACTTAGCTAAAGGGAAATCAGATAG 296
Query 81 CAAGCACTGTGTCATAAAAGAGATCAATTTTGAAAAGATGCCCATACAAGAAAAAGAAGCTTCAAAGAAAGAAG 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CAAGCACTGTGTCATAAAAGAGATCAATTTTGAAAAGATGCCCATACAAGAAAAAGAAGCTTCAAAGAAAGAAG 370
Query 155 TGATTCTTCTGGAAAAGATGAAACATCCCAACATTGTAGCCTTCTTCAATTCATTTCAAGAGAATGGCAGGCTG 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGATTCTTCTGGAAAAGATGAAACATCCCAACATTGTAGCCTTCTTCAATTCATTTCAAGAGAATGGCAGGCTG 444
Query 229 TTTATTGTAATGGAATATTGTGATGGAGGGGATCTCATGAAAAGGATCAATAGACAACGGGGTGTGTTATTTAG 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTTATTGTAATGGAATATTGTGATGGAGGGGATCTCATGAAAAGGATCAATAGACAACGGGGTGTGTTATTTAG 518
Query 303 TGAAGATCAGATCCTCGGTTGGTTTGTACAGATTTCTCTAGGACTAAAACATATTCATGACAGGAAGATATTAC 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGAAGATCAGATCCTCGGTTGGTTTGTACAGATTTCTCTAGGACTAAAACATATTCATGACAGGAAGATATTAC 592
Query 377 ACAGGGACATAAAAGCTCAGAACATTTTTCTTAGCAAGAACGGAATGGTGGCAAAGCTTGGGGACTTTGGTATA 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ACAGGGACATAAAAGCTCAGAACATTTTTCTTAGCAAGAACGGAATGGTGGCAAAGCTTGGGGACTTTGGTATA 666
Query 451 GCAAGAGTCCTGAATAATTCCATGGAACTTGCTCGAACTTGTATTGGAACACCTTACTACCTGTCCCCAGAGAT 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GCAAGAGTCCTGAATAATTCCATGGAACTTGCTCGAACTTGTATTGGAACACCTTACTACCTGTCCCCAGAGAT 740
Query 525 CTGTCAGAATAAACCCTACAACAATAAAACGGATATTTGGTCTCTTGGCTGTGTCTTATATGAGCTCTGCACAC 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CTGTCAGAATAAACCCTACAACAATAAAACGGATATTTGGTCTCTTGGCTGTGTCTTATATGAGCTCTGCACAC 814
Query 599 TTAAACATCCTTTTGAGGGTAACAACTTACAGCAGCTGGTTCTGAAGATTTGTCAAGCACATTTTGCCCCAATA 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TTAAACATCCTTTTGAGGGTAACAACTTACAGCAGCTGGTTCTGAAGATTTGTCAAGCACATTTTGCCCCAATA 888
Query 673 TCTCCGGGGTTTTCTCGTGAGCTCCATTCCTTGATATCTCAGCTCTTTCAAGTATCT-CTCGAGACCGA-CAT- 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 889 TCTCCGGGGTTTTCTCGTGAGCTCCATTCCTTGATATCTCAGCTCTTTCAAGTATCTCCTCGAGACCGACCATC 962
Query 744 CATAAATTCCATTTTGAAA--GCCC-TTTTAGAGAATCTTATTCCC-AATATTTGACTCCTGGAGGTCATTCAG 813
||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 963 CATAAATTCCATTTTGAAAAGGCCCTTTTTAGAGAATCTTATTCCCAAATATTTGACTCCT-GAGGTCATTCAG 1035
Query 814 GAGGAATTCAGTCACATGCTTATATGCAGAGCAGGAGCGCCAGCTTCTCGACATGCTGGGAAGGTGGTCCAGAA 887
||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036 GAAGAATTCAGTCACATGCTTATATGCAGAGCAGGAGCGCCAGCTTCTCGACATGCTGGGAAGGTGGTCCAGAA 1109
Query 888 GTGTAAAATACAAAAAGTGAGATTCCAGGGAAAGTGCCCACCAAGATCAAGGATATCTGTGCCAATTAAAAGGA 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110 GTGTAAAATACAAAAAGTGAGATTCCAGGGAAAGTGCCCACCAAGATCAAGGATATCTGTGCCAATTAAAAGGA 1183
Query 962 ATGCTATATTGCATAGAAATGAATGGAGACCACCAGCTGGAGCCCAGAAGGCCAGATCTATAAAAATGATAGAA 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184 ATGCTATATTGCATAGAAATGAATGGAGACCACCAGCTGGAGCCCAGAAGGCCAGATCTATAAAAATGATAGAA 1257
Query 1036 AGACCCAAAATTGCTGCTGTCTGTGGACATTATGATTATTATTATGCTCAACTTGATATGCTGAGGAGGAGAGC 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258 AGACCCAAAATTGCTGCTGTCTGTGGACATTATGATTATTATTATGCTCAACTTGATATGCTGAGGAGGAGAGC 1331
Query 1110 CCACAAACCAAGTTATCACCCTATTCCTCAAGAAAATACTGGAGTTGAGGATTACGGTCAGGAAACGAGGCATG 1183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1332 CCACAAACCAAGTTATCACCCTATTCCTCAAGAAAATACTGGAGTTGAGGATTACGGTCAGGAAACGAGGCATG 1405
Query 1184 GTCCATCCCCAAGTCAATGGCCTGCTGAGTACCTTCAGAGAAAATT-TGAAGGTCCACAATATAAGTTTGAAAG 1256
|||||||||||||||||||| ||||| || |||.|| |||
Sbjct 1406 GTCCATCCCCAAGTCAATGG---------------------AAATTCTG-----CCAAAA----------AAA- 1442
Query 1257 TGGAGAAGCAATTGGGTCTTCGTCCATCTCTTGCCGAGCCAAATTACAACCAAGAGACAAGAGCTAGNAAGTAA 1330
|||..||
Sbjct 1443 ---AGATACA---------------------------------------------------------------- 1449
Query 1331 TGGAGAAGAGCCTAGATTCCAGGAGCTGCCATTTAGGAAAAACGAAATGAAGGAACAGGAATATTGGAAGCAGT 1404
Sbjct 1450 -------------------------------------------------------------------------- 1449
Query 1405 TAGAGGAAATACGCCAACAGTACCACAATGACATGAAAGAAATTAGAAAGAAGATGGGGAGAGAACCAGAGGAG 1478
Sbjct 1450 -------------------------------------------------------------------------- 1449
Query 1479 AACTCAAAAATAAGTCATAAAACCTATTTGGTGAAGAAGAGTAACCTGCCTGTCCATCAAGATGCATCTGAGGG 1552
Sbjct 1450 -------------------------------------------------------------------------- 1449
Query 1553 AGAAGCACCTGTGCAGGACATTGAAAAAGACTTGAAACAAATGAGGCTTCAGAACACAAAGGAAAGTAAAAATC 1626
Sbjct 1450 -------------------------------------------------------------------------- 1449
Query 1627 CAGAACAGAAATATAAAGCTAAGAAGGGGGTAAAATTTGAAATTAATTTAGACAAATGTATTTCTGATGAAAAC 1700
Sbjct 1450 -------------------------------------------------------------------------- 1449
Query 1701 ATCCTCCAAGAGGAAGAGGCAATGGATATACCAAATGAAACTTTGACCTTTGAGGATGGCATGAAGTTTAAGGA 1774
Sbjct 1450 -------------------------------------------------------------------------- 1449
Query 1775 ATATGAATGTGTAAAGGAGCATGGAGATTATACAGACAAAGCATTTGAAAAACTTCACTGCCCAGAAGCAGGGT 1848
Sbjct 1450 -------------------------------------------------------------------------- 1449
Query 1849 TTTCCACGCAGACTGTAGCTGCTGTGGGAAACAGGAGGCAGTGGGATGGAGGAGCGCCTCAGACTCTGCTGCAG 1922
Sbjct 1450 -------------------------------------------------------------------------- 1449
Query 1923 ATGATGGCAGTGGCCGACATCACCTCCACCTGCCCCACGGGGCCTGACAGTGAGTCTGTGCTTAGCGTCAGTCG 1996
Sbjct 1450 -------------------------------------------------------------------------- 1449
Query 1997 TCAGGAAGGGAAGACCAAGGACCCGTACAGCCCAGTGCTCATCCTGATG 2045
Sbjct 1450 ------------------------------------------------- 1449
