Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_15308
• Subject: XM_011532819.2
• Aligned Length: 963
• Identities: 556
• Gaps: 381

Alignment

Query   1  ATGGAAAAGTATGAAAAATTAGCTAAGACTGGAGAAGGGTCTTATGGGGTTGTATTCAAATGCAGAAACAAAAC  74
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   1  ATGGAAAAGTATGAAAAATTAGCTAAGACTGGAGAAGGGTCTTATGGGGTTGTATTCAAATGCAGAAACAAAAC  74

Query  75  CTCTGGACAAGTAGTAGCTGTTAAAAAATTTGTGGAATCTGAAGATGATCCTGTTGTTAAGAAAATAGCACTAA  148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  75  CTCTGGACAAGTAGTAGCTGTTAAAAAATTTGTGGAATCTGAAGATGATCCTGTTGTTAAGAAAATAGCACTAA  148

Query 149  GAGAAATACGTATGTTGAAGCAAATTAAAACAATNCCAAATCTTGTGAACCTCATCGAAGGTGTTCAGGAGAAA  222
           ||||||||||||||||||||| ||||||||||  .|||||||||||||||||||||| ||||||||||||| ||
Sbjct 149  GAGAAATACGTATGTTGAAGC-AATTAAAACA--TCCAAATCTTGTGAACCTCATCG-AGGTGTTCAGGAG-AA  217

Query 223  AAAGGAAAATGCATTTAGTTTTTGAATACTGTGATCATACACTTTTAAATGAGCTGGAAAGAAACCCAAATGGA  296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 218  AAAGGAAAATGCATTTAGTTTTTGAATACTGTGATCATACACTTTTAAATGAGCTGGAAAGAAACCCAAATGGA  291

Query 297  GTTGCTGATGGAGTGATCAAAAGCGTATTATGGCAAACACTTCAAGCTCTTAATTTCTGTCATATACATAACTG  370
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 292  GTTGCTGATGGAGTGATCAAAAGCGTATTATGGCAAACACTTCAAGCTCTTAATTTCTGTCATATACATAACTG  365

Query 371  TATTCACAGAGATATAAAACCTGAAAATATTCTAATAACTAAGCAAGGAATAATCAAGATTTGTGACTTCGGGT  444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 366  TATTCACAGAGATATAAAACCTGAAAATATTCTAATAACTAAGCAAGGAATAATCAAGATTTGTGACTTCGGGT  439

Query 445  TTGCACAAATTCTGATTCCAGGAGATGCCTACACCGATTATGTAGCTACGAGATGGTACCGAGCTCCTGAACTT  518
           |||||||||||||||.|                                                  ||.||||
Sbjct 440  TTGCACAAATTCTGAGT--------------------------------------------------TGGACTT  463

Query 519  CTTGTGGGAGATACTCAGTATGGTTCTTCAGTCGATATATGGGCTATTGGTTGTGTTTTTGCAGAGCTCCTGAC  592
           |.|.|      |.|||    ||||.|.|| .|.|||   |||..||.|.|||           ||.||.|||| 
Sbjct 464  CATCT------TTCTC----TGGTGCCTC-CTTGAT---TGGCTTAATAGTT-----------GACCTTCTGA-  511

Query 593  AGGCCAGCCACTGTGGCCTGGAAAATCAGATGTGGACCAACTTTATCT---------GATAATCAGAACA---C  654
                |..|..|.|   |||..||.|||||    ||     |||.|||         |||       .||   |
Sbjct 512  -----ATTCTTTTT---CTGCCAATTCAGA----GA-----TTTTTCTCCTGGCTTGGAT-------CCATTGC  561

Query 655  TAGGAAAATTAATCCCAAGACATCAATCAATCTTTAAAAGTAACGGGTTTTTCCATGGCATCAGTATACCTGAG  728
           | ||||||||||||||||||||||||||||||||                                        
Sbjct 562  T-GGAAAATTAATCCCAAGACATCAATCAATCTT----------------------------------------  594

Query 729  CCAGAAGACATGGAAACTCTTGAGGAAAAGTTCTCAGATGTTCATCCTGTGGCTTCTGAACTTCATGAANGGNT  802
                                                                                     
Sbjct 595  --------------------------------------------------------------------------  594

Query 803  GTCTGAAGATGAATCCAGATGACAGATTAACCTGTTCCCAACTCCTGGAGAGCTCCTACTTTGATTCTTTTCAA  876
                                                                                     
Sbjct 595  --------------------------------------------------------------------------  594

Query 877  GAGGCCCAAATTAAAAGAAAAGCACGTAATGAAGGAAGAAACAGAAGACGCCAACAGGTACTTCCGCTCAAAAG  950
                                                                                     
Sbjct 595  --------------------------------------------------------------------------  594

Query 951  T  951
            
Sbjct 595  -  594