Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_15308
• Subject: XM_017003984.1
• Aligned Length: 976
• Identities: 520
• Gaps: 440

Alignment

Query   1  ATGGAAAAGTATGAAAAATTAGCTAAGACTGGAGAAGGGTCTTATGGGGTTGTATTCAAATGCAGAAACAAAAC  74
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   1  ATGGAAAAGTATGAAAAATTAGCTAAGACTGGAGAAGGGTCTTATGGGGTTGTATTCAAATGCAGAAACAAAAC  74

Query  75  CTCTGGACAAGTAGTAGCTGTTAAAAAATTTGTGGAATCTGAAGATGATCCTGTTGTTAAGAAAATAGCACTAA  148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  75  CTCTGGACAAGTAGTAGCTGTTAAAAAATTTGTGGAATCTGAAGATGATCCTGTTGTTAAGAAAATAGCACTAA  148

Query 149  GAGAAATACGTATGTTGAAGCAAATTAAAACAATNCCAAATCTTGTGAACCTCATCGAAGGTGTTCAGGAGAAA  222
           ||||||||||||||||||||| ||||||||||  .|||||||||||||||||||||| ||||||||||||| ||
Sbjct 149  GAGAAATACGTATGTTGAAGC-AATTAAAACA--TCCAAATCTTGTGAACCTCATCG-AGGTGTTCAGGAG-AA  217

Query 223  AAAGGAAAATGCATTTAGTTTTTGAATACTGTGATCATACACTTTTAAATGAGCTGGAAAGAAACCCAAATGGA  296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 218  AAAGGAAAATGCATTTAGTTTTTGAATACTGTGATCATACACTTTTAAATGAGCTGGAAAGAAACCCAAATGGA  291

Query 297  GTTGCTGATGGAGTGATCAAAAGCGTATTATGGCAAACACTTCAAGCTCTTAATTTCTGTCATATACATAACTG  370
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 292  GTTGCTGATGGAGTGATCAAAAGCGTATTATGGCAAACACTTCAAGCTCTTAATTTCTGTCATATACATAACTG  365

Query 371  TATTCACAGAGATATAAAACCTGAAAATATTCTAATAACTAAGCAAGGAATAATCAAGATTTGTGACTTCGGGT  444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 366  TATTCACAGAGATATAAAACCTGAAAATATTCTAATAACTAAGCAAGGAATAATCAAGATTTGTGACTTCGGGT  439

Query 445  TTGCACAAATTCTGA-TTCCAGGA--------------GATGCCTACACC--GATTATGTAGC-TACGAGATGG  500
           ||||||||||||||| ||   |||              |.|||||   ||  |||    |.|| ||..||.|  
Sbjct 440  TTGCACAAATTCTGAGTT---GGACTTCATCTTTCTCTGGTGCCT---CCTTGAT----TGGCTTAATAGTT--  501

Query 501  TACCGAGCTCCTGAACTTCTTGTGGGAGATACTCAGTATGGTTCTTCAGTCGATATATGGGCTATTGGTTGTGT  574
               ||.||.||||| |||||                   .||||              |.|.|||        
Sbjct 502  ----GACCTTCTGAA-TTCTT-------------------TTTCT--------------GCCAATT--------  529

Query 575  TTTTGCAGAG------CTCCTGAC-AGGCCAGCCACTGTGGCCTGGAAAATCAGATGTGGACCAACTTTATCTG  641
                |||||      ||||||.| .||  |.|||.||.                                   
Sbjct 530  -----CAGAGATTTTTCTCCTGGCTTGG--ATCCATTGC-----------------------------------  561

Query 642  ATAATCAGAACACTAGGAAAATTAATCCCAAGACATCAATCAATCTTTAAAAGTAACGGGTTTTTCCATGGCAT  715
                                                                                     
Sbjct 562  --------------------------------------------------------------------------  561

Query 716  CAGTATACCTGAGCCAGAAGACATGGAAACTCTTGAGGAAAAGTTCTCAGATGTTCATCCTGTGGCTTCTGAAC  789
                                                                                     
Sbjct 562  --------------------------------------------------------------------------  561

Query 790  TTCATGAANGGNTGTCTGAAGATGAATCCAGATGACAGATTAACCTGTTCCCAACTCCTGGAGAGCTCCTACTT  863
                                                                                     
Sbjct 562  --------------------------------------------------------------------------  561

Query 864  TGATTCTTTTCAAGAGGCCCAAATTAAAAGAAAAGCACGTAATGAAGGAAGAAACAGAAGACGCCAACAGGTAC  937
                                                                                     
Sbjct 562  --------------------------------------------------------------------------  561

Query 938  TTCCGCTCAAAAGT  951
                         
Sbjct 562  --------------  561