Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15338
- Subject:
- NM_000222.2
- Aligned Length:
- 2928
- Identities:
- 717
- Gaps:
- 2204
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGAGGCGCTCGCGGCGCCTGGGATTTTCTCTGCGTTCTGCTCCTACTGCTTCGCGTCCAGACAGGCTCTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCAACCATCTGTGAGTCCAGGGGAACCGTCTCCACCATCCATCCATCCAGGAAAATCAGACTTAATAGTCCGCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGGCGACGAGATTAGGCTGTTATGCACTGATCCGGGCTTTGTCAAATGGACTTTTGAGATCCTGGATGAAACG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AATGAGAATAAGCAGAATGAATGGATCACGGAAAAGGCAGAAGCCACCAACACCGGCAAATACACGTGCACCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAAACACGGCTTAAGCAATTCCATTTATGTGTTTGTTAGAGATCCTGCCAAGCTTTTCCTTGTTGACCGCTCCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGTATGGGAAAGAAGACAACGACACGCTGGTCCGCTGTCCTCTCACAGACCCAGAAGTGACCAATTATTCCCTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGGGGTGCCAGGGGAAGCCTCTTCCCAAGGACTTGAGGTTTATTCCTGACCCCAAGGCGGGCATCATGATCAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AAGTGTGAAACGCGCCTACCATCGGCTCTGTCTGCATTGTTCTGTGGACCAGGAGGGCAAGTCAGTGCTGTCGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAAAATTCATCCTGAAAGTGAGGCCAGCCTTCAAAGCTGTGCCTGTTGTGTCTGTGTCCAAAGCAAGCTATCTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTTAGGGAAGGGGAAGAATTCACAGTGACGTGCACAATAAAAGATGTGTCTAGTTCTGTGTACTCAACGTGGAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAGAGAAAACAGTCAGACTAAACTACAGGAGAAATATAATAGCTGGCATCACGGTGACTTCAATTATGAACGTC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGGCAACGTTGACTATCAGTTCAGCGAGAGTTAATGATTCTGGAGTGTTCATGTGTTATGCCAATAATACTTTT 888
Query 1 ---------------------------------------------------------------ATGATAAACAC 11
|||||||||||
Sbjct 889 GGATCAGCAAATGTCACAACAACCTTGGAAGTAGTAGATAAAGGATTCATTAATATCTTCCCCATGATAAACAC 962
Query 12 TACAGTATTTGTAAACGATGGAGAAAATGTAGATTTGATTGTTGAATATGAAGCATTCCCCAAACCTGAACACC 85
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TACAGTATTTGTAAACGATGGAGAAAATGTAGATTTGATTGTTGAATATGAAGCATTCCCCAAACCTGAACACC 1036
Query 86 AGCAGTGGATCTATATGAACAGAACCTTCACTGATAAATGGGAAGATTATCCCAAGTCTGAGAATGAAAGTAAT 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGCAGTGGATCTATATGAACAGAACCTTCACTGATAAATGGGAAGATTATCCCAAGTCTGAGAATGAAAGTAAT 1110
Query 160 ATCAGATACGTAAGTGAACTTCATCTAACGAGATTAAAAGGCACCGAAGGAGGCACTTACACATTCCTAGTGTC 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ATCAGATACGTAAGTGAACTTCATCTAACGAGATTAAAAGGCACCGAAGGAGGCACTTACACATTCCTAGTGTC 1184
Query 234 CAATTCTGACGTCAATGCTGCCATAGCATTTAATGTTTATGTGAATACAAAACCAGAAATCCTGACTTACGACA 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CAATTCTGACGTCAATGCTGCCATAGCATTTAATGTTTATGTGAATACAAAACCAGAAATCCTGACTTACGACA 1258
Query 308 GGCTCGTGAATGGCATGCTCCAATGTGTGGCAGCAGGATTCCCAGAGCCCACAATAGATTGGTATTTTTGTCCA 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GGCTCGTGAATGGCATGCTCCAATGTGTGGCAGCAGGATTCCCAGAGCCCACAATAGATTGGTATTTTTGTCCA 1332
Query 382 GGAACTGAGCAGAGATGCTCTGCTTCTGTACTGCCAGTGGATGTGCAGACACTAAACTCATCTGGGCCACCGTT 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GGAACTGAGCAGAGATGCTCTGCTTCTGTACTGCCAGTGGATGTGCAGACACTAAACTCATCTGGGCCACCGTT 1406
Query 456 TGGAAAGCTAGTGGTTCAGAGTTCTATAGATTCTAGTGCATTCAAGCACAATGGCACGGTTGAATGTAAGGCTT 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TGGAAAGCTAGTGGTTCAGAGTTCTATAGATTCTAGTGCATTCAAGCACAATGGCACGGTTGAATGTAAGGCTT 1480
Query 530 ACAACGATGTGGGCAAGACTTCTGCCTATTTTAACTTTGCATTT------------AAAGAGCAAATCCATCCC 591
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1481 ACAACGATGTGGGCAAGACTTCTGCCTATTTTAACTTTGCATTTAAAGGTAACAACAAAGAGCAAATCCATCCC 1554
Query 592 CACACCCTGTTCACTCCTTTGCTGATTGGTTTCGTAATCGTAGCTGGCATGATGTGCATTATTGTGATGATTCT 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CACACCCTGTTCACTCCTTTGCTGATTGGTTTCGTAATCGTAGCTGGCATGATGTGCATTATTGTGATGATTCT 1628
Query 666 GACCTACAAATATTTACAGAAACCCATGTNNNNAGTACAGTGGANNGTTGTTGANGAGA--------------- 724
|||||||||||||||||||||||||||||....|||||||||||..||||||||.||||
Sbjct 1629 GACCTACAAATATTTACAGAAACCCATGTATGAAGTACAGTGGAAGGTTGTTGAGGAGATAAATGGAAACAATT 1702
Query 725 -------------------------------------------------------------------------- 724
Sbjct 1703 ATGTTTACATAGACCCAACACAACTTCCTTATGATCACAAATGGGAGTTTCCCAGAAACAGGCTGAGTTTTGGG 1776
Query 725 -------------------------------------------------------------------------- 724
Sbjct 1777 AAAACCCTGGGTGCTGGAGCTTTCGGGAAGGTTGTTGAGGCAACTGCTTATGGCTTAATTAAGTCAGATGCGGC 1850
Query 725 -------------------------------------------------------------------------- 724
Sbjct 1851 CATGACTGTCGCTGTAAAGATGCTCAAGCCGAGTGCCCATTTGACAGAACGGGAAGCCCTCATGTCTGAACTCA 1924
Query 725 -------------------------------------------------------------------------- 724
Sbjct 1925 AAGTCCTGAGTTACCTTGGTAATCACATGAATATTGTGAATCTACTTGGAGCCTGCACCATTGGAGGGCCCACC 1998
Query 725 -------------------------------------------------------------------------- 724
Sbjct 1999 CTGGTCATTACAGAATATTGTTGCTATGGTGATCTTTTGAATTTTTTGAGAAGAAAACGTGATTCATTTATTTG 2072
Query 725 -------------------------------------------------------------------------- 724
Sbjct 2073 TTCAAAGCAGGAAGATCATGCAGAAGCTGCACTTTATAAGAATCTTCTGCATTCAAAGGAGTCTTCCTGCAGCG 2146
Query 725 -------------------------------------------------------------------------- 724
Sbjct 2147 ATAGTACTAATGAGTACATGGACATGAAACCTGGAGTTTCTTATGTTGTCCCAACCAAGGCCGACAAAAGGAGA 2220
Query 725 -------------------------------------------------------------------------- 724
Sbjct 2221 TCTGTGAGAATAGGCTCATACATAGAAAGAGATGTGACTCCCGCCATCATGGAGGATGACGAGTTGGCCCTAGA 2294
Query 725 -------------------------------------------------------------------------- 724
Sbjct 2295 CTTAGAAGACTTGCTGAGCTTTTCTTACCAGGTGGCAAAGGGCATGGCTTTCCTCGCCTCCAAGAATTGTATTC 2368
Query 725 -------------------------------------------------------------------------- 724
Sbjct 2369 ACAGAGACTTGGCAGCCAGAAATATCCTCCTTACTCATGGTCGGATCACAAAGATTTGTGATTTTGGTCTAGCC 2442
Query 725 -------------------------------------------------------------------------- 724
Sbjct 2443 AGAGACATCAAGAATGATTCTAATTATGTGGTTAAAGGAAACGCTCGACTACCTGTGAAGTGGATGGCACCTGA 2516
Query 725 -------------------------------------------------------------------------- 724
Sbjct 2517 AAGCATTTTCAACTGTGTATACACGTTTGAAAGTGACGTCTGGTCCTATGGGATTTTTCTTTGGGAGCTGTTCT 2590
Query 725 -------------------------------------------------------------------------- 724
Sbjct 2591 CTTTAGGAAGCAGCCCCTATCCTGGAATGCCGGTCGATTCTAAGTTCTACAAGATGATCAAGGAAGGCTTCCGG 2664
Query 725 -------------------------------------------------------------------------- 724
Sbjct 2665 ATGCTCAGCCCTGAACACGCACCTGCTGAAATGTATGACATAATGAAGACTTGCTGGGATGCAGATCCCCTAAA 2738
Query 725 -------------------------------------------------------------------------- 724
Sbjct 2739 AAGACCAACATTCAAGCAAATTGTTCAGCTAATTGAGAAGCAGATTTCAGAGAGCACCAATCATATTTACTCCA 2812
Query 725 -------------------------------------------------------------------------- 724
Sbjct 2813 ACTTAGCAAACTGCAGCCCCAACCGACAGAAGCCCGTGGTAGACCATTCTGTGCGGATCAATTCTGTCGGCAGC 2886
Query 725 ------------------------------------------ 724
Sbjct 2887 ACCGCTTCCTCCTCCCAGCCTCTGCTTGTGCACGACGATGTC 2928
