Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15338
- Subject:
- XM_005265741.1
- Aligned Length:
- 2928
- Identities:
- 717
- Gaps:
- 2204
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGAGGCGCTCGCGGCGCCTGGGATTTTCTCTGCGTTCTGCTCCTACTGCTTCGCGTCCAGACAGGCTCTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCAACCATCTGTGAGTCCAGGGGAACCGTCTCCACCATCCATCCATCCAGGAAAATCAGACTTAATAGTCCGCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGGCGACGAGATTAGGCTGTTATGCACTGATCCGGGCTTTGTCAAATGGACTTTTGAGATCCTGGATGAAACG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AATGAGAATAAGCAGAATGAATGGATCACGGAAAAGGCAGAAGCCACCAACACCGGCAAATACACGTGCACCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAAACACGGCTTAAGCAATTCCATTTATGTGTTTGTTAGAGATCCTGCCAAGCTTTTCCTTGTTGACCGCTCCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGTATGGGAAAGAAGACAACGACACGCTGGTCCGCTGTCCTCTCACAGACCCAGAAGTGACCAATTATTCCCTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGGGGTGCCAGGGGAAGCCTCTTCCCAAGGACTTGAGGTTTATTCCTGACCCCAAGGCGGGCATCATGATCAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AAGTGTGAAACGCGCCTACCATCGGCTCTGTCTGCATTGTTCTGTGGACCAGGAGGGCAAGTCAGTGCTGTCGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAAAATTCATCCTGAAAGTGAGGCCAGCCTTCAAAGCTGTGCCTGTTGTGTCTGTGTCCAAAGCAAGCTATCTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTTAGGGAAGGGGAAGAATTCACAGTGACGTGCACAATAAAAGATGTGTCTAGTTCTGTGTACTCAACGTGGAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAGAGAAAACAGTCAGCAGACTAAACTACAGGAGAAATATAATAGCTGGCATCACGGTGACTTCAATTATGAAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTCAGGCAACGTTGACTATCAGTTCAGCGAGAGTTAATGATTCTGGAGTGTTCATGTGTTATGCCAATAATACT 888
Query 1 ------------------------------------------------------------------ATGATAAA 8
||||||||
Sbjct 889 TTTGGATCAGCAAATGTCACAACAACCTTGGAAGTAGTAGATAAAGGATTCATTAATATCTTCCCCATGATAAA 962
Query 9 CACTACAGTATTTGTAAACGATGGAGAAAATGTAGATTTGATTGTTGAATATGAAGCATTCCCCAAACCTGAAC 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CACTACAGTATTTGTAAACGATGGAGAAAATGTAGATTTGATTGTTGAATATGAAGCATTCCCCAAACCTGAAC 1036
Query 83 ACCAGCAGTGGATCTATATGAACAGAACCTTCACTGATAAATGGGAAGATTATCCCAAGTCTGAGAATGAAAGT 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACCAGCAGTGGATCTATATGAACAGAACCTTCACTGATAAATGGGAAGATTATCCCAAGTCTGAGAATGAAAGT 1110
Query 157 AATATCAGATACGTAAGTGAACTTCATCTAACGAGATTAAAAGGCACCGAAGGAGGCACTTACACATTCCTAGT 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AATATCAGATACGTAAGTGAACTTCATCTAACGAGATTAAAAGGCACCGAAGGAGGCACTTACACATTCCTAGT 1184
Query 231 GTCCAATTCTGACGTCAATGCTGCCATAGCATTTAATGTTTATGTGAATACAAAACCAGAAATCCTGACTTACG 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GTCCAATTCTGACGTCAATGCTGCCATAGCATTTAATGTTTATGTGAATACAAAACCAGAAATCCTGACTTACG 1258
Query 305 ACAGGCTCGTGAATGGCATGCTCCAATGTGTGGCAGCAGGATTCCCAGAGCCCACAATAGATTGGTATTTTTGT 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ACAGGCTCGTGAATGGCATGCTCCAATGTGTGGCAGCAGGATTCCCAGAGCCCACAATAGATTGGTATTTTTGT 1332
Query 379 CCAGGAACTGAGCAGAGATGCTCTGCTTCTGTACTGCCAGTGGATGTGCAGACACTAAACTCATCTGGGCCACC 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CCAGGAACTGAGCAGAGATGCTCTGCTTCTGTACTGCCAGTGGATGTGCAGACACTAAACTCATCTGGGCCACC 1406
Query 453 GTTTGGAAAGCTAGTGGTTCAGAGTTCTATAGATTCTAGTGCATTCAAGCACAATGGCACGGTTGAATGTAAGG 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GTTTGGAAAGCTAGTGGTTCAGAGTTCTATAGATTCTAGTGCATTCAAGCACAATGGCACGGTTGAATGTAAGG 1480
Query 527 CTTACAACGATGTGGGCAAGACTTCTGCCTATTTTAACTTTGCATTT------------AAAGAGCAAATCCAT 588
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1481 CTTACAACGATGTGGGCAAGACTTCTGCCTATTTTAACTTTGCATTTAAAGGTAACAACAAAGAGCAAATCCAT 1554
Query 589 CCCCACACCCTGTTCACTCCTTTGCTGATTGGTTTCGTAATCGTAGCTGGCATGATGTGCATTATTGTGATGAT 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CCCCACACCCTGTTCACTCCTTTGCTGATTGGTTTCGTAATCGTAGCTGGCATGATGTGCATTATTGTGATGAT 1628
Query 663 TCTGACCTACAAATATTTACAGAAACCCATGTNNNNAGTACAGTGGANNGTTGTTGANGAGA------------ 724
||||||||||||||||||||||||||||||||....|||||||||||..||||||||.||||
Sbjct 1629 TCTGACCTACAAATATTTACAGAAACCCATGTATGAAGTACAGTGGAAGGTTGTTGAGGAGATAAATGGAAACA 1702
Query 725 -------------------------------------------------------------------------- 724
Sbjct 1703 ATTATGTTTACATAGACCCAACACAACTTCCTTATGATCACAAATGGGAGTTTCCCAGAAACAGGCTGAGTTTT 1776
Query 725 -------------------------------------------------------------------------- 724
Sbjct 1777 GGGAAAACCCTGGGTGCTGGAGCTTTCGGGAAGGTTGTTGAGGCAACTGCTTATGGCTTAATTAAGTCAGATGC 1850
Query 725 -------------------------------------------------------------------------- 724
Sbjct 1851 GGCCATGACTGTCGCTGTAAAGATGCTCAAGCCGAGTGCCCATTTGACAGAACGGGAAGCCCTCATGTCTGAAC 1924
Query 725 -------------------------------------------------------------------------- 724
Sbjct 1925 TCAAAGTCCTGAGTTACCTTGGTAATCACATGAATATTGTGAATCTACTTGGAGCCTGCACCATTGGAGGGCCC 1998
Query 725 -------------------------------------------------------------------------- 724
Sbjct 1999 ACCCTGGTCATTACAGAATATTGTTGCTATGGTGATCTTTTGAATTTTTTGAGAAGAAAACGTGATTCATTTAT 2072
Query 725 -------------------------------------------------------------------------- 724
Sbjct 2073 TTGTTCAAAGCAGGAAGATCATGCAGAAGCTGCACTTTATAAGAATCTTCTGCATTCAAAGGAGTCTTCCTGCG 2146
Query 725 -------------------------------------------------------------------------- 724
Sbjct 2147 ATAGTACTAATGAGTACATGGACATGAAACCTGGAGTTTCTTATGTTGTCCCAACCAAGGCCGACAAAAGGAGA 2220
Query 725 -------------------------------------------------------------------------- 724
Sbjct 2221 TCTGTGAGAATAGGCTCATACATAGAAAGAGATGTGACTCCCGCCATCATGGAGGATGACGAGTTGGCCCTAGA 2294
Query 725 -------------------------------------------------------------------------- 724
Sbjct 2295 CTTAGAAGACTTGCTGAGCTTTTCTTACCAGGTGGCAAAGGGCATGGCTTTCCTCGCCTCCAAGAATTGTATTC 2368
Query 725 -------------------------------------------------------------------------- 724
Sbjct 2369 ACAGAGACTTGGCAGCCAGAAATATCCTCCTTACTCATGGTCGGATCACAAAGATTTGTGATTTTGGTCTAGCC 2442
Query 725 -------------------------------------------------------------------------- 724
Sbjct 2443 AGAGACATCAAGAATGATTCTAATTATGTGGTTAAAGGAAACGCTCGACTACCTGTGAAGTGGATGGCACCTGA 2516
Query 725 -------------------------------------------------------------------------- 724
Sbjct 2517 AAGCATTTTCAACTGTGTATACACGTTTGAAAGTGACGTCTGGTCCTATGGGATTTTTCTTTGGGAGCTGTTCT 2590
Query 725 -------------------------------------------------------------------------- 724
Sbjct 2591 CTTTAGGAAGCAGCCCCTATCCTGGAATGCCGGTCGATTCTAAGTTCTACAAGATGATCAAGGAAGGCTTCCGG 2664
Query 725 -------------------------------------------------------------------------- 724
Sbjct 2665 ATGCTCAGCCCTGAACACGCACCTGCTGAAATGTATGACATAATGAAGACTTGCTGGGATGCAGATCCCCTAAA 2738
Query 725 -------------------------------------------------------------------------- 724
Sbjct 2739 AAGACCAACATTCAAGCAAATTGTTCAGCTAATTGAGAAGCAGATTTCAGAGAGCACCAATCATATTTACTCCA 2812
Query 725 -------------------------------------------------------------------------- 724
Sbjct 2813 ACTTAGCAAACTGCAGCCCCAACCGACAGAAGCCCGTGGTAGACCATTCTGTGCGGATCAATTCTGTCGGCAGC 2886
Query 725 ------------------------------------------ 724
Sbjct 2887 ACCGCTTCCTCCTCCCAGCCTCTGCTTGTGCACGACGATGTC 2928
