Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15487
- Subject:
- NR_033708.1
- Aligned Length:
- 4077
- Identities:
- 164
- Gaps:
- 3891
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTGTTGCGGGATCTCACAGGCTTTAAACCGCGGCGCCGCGGCGCCCGGGTGTGGATCCCTAGATGGGAGCCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGATGGGCCGGGTGCCTGGTGGGTGGCAGTCGGGGCTGACGGCGGCGGCACTTTGCCGCCTCAGGCCCTGGACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTTCACCCCGCCGCCTGCCCAGGCGGGCCGGCCCTGCCCGTCCACCGGCCGCCGAGAGTCCCCGGCCTTGGGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCCGGGGCCGCTGACTGGCCTCGGTCACCTCCCGGGGAAGGCTCCCGCGCCTCCATCTGCCCCCGCAGGAAGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GACCCTCTTCTCGCCCGCGAGGCTTCTCCGGGTGGGATCGTCCTGGCCCCCAGCCCTAAGGGATCCGCCCCCTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGAGCATCCGCCGCCCCTCGGAGACCACTCCAGCTCGGACGGACCCACTCCAGCCCCCGCTGCACGCGGAAGCG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTCATCCTCCCCGCCTGCCCCGTTCCCTCCCCCTTCTCCTGTGGGACAACCAGGGACCGCAGCTCCCCGCTCCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAGGTGTGGGGGCTCCGACACGAACGCCTCTGCTCGCAGGGCGGTGAGCGCAGATCCCACGGGTCCCTCGGTCG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGGTCGAGGCTGCTTCCGTTTCCATCCCGGACCCGACAATGGGCGGGAAAAAGAAGGCTTTACACGACTACGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGCGGAGTTCACCGACCTGGTGGTGAAGCACCTGATTGAGCACAGTGACTCTGGGGACACGTCTGTGGTGGAGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCCTTTACTGCAGGGCCTGCGAGCTGCCCGTGCGCGTGCGGAGGGACCGCATCCTGGAACACCTGTCCTCGGGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGGCAGCACGGCCTGCGGACGCCCATTCTCATGTAAATGTCAGTGCCAACGCTGGTGTTTCAGGAGTCATCCCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCGGGCTGCGGGCTATTTTAGGATTCTCTGCCCTGCAAACGTTTCCAAAGTACGTGGACAGGCCGCCTGATGAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACTACGTTTACGGGATCTGCTAGTGGCTTGCCTACTTAGGGAGTAAACCCTGTGAAGTCTCGCAGTTTTGTTAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGTGTGCGTGGCCACCTGAATGCTGCCTTATCACAAGCCAGATACATACTGGTCTGTAGGGTAACTCCCCACTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTGATCCTCTGAGATGATTGTGGACTGGGTGCTGTGAGTCCTGCCACTTTGTTTAAGTGAATGTGTCTTTTGTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAGCTCAGCCGCCTCGGATCTCGCTGCCACCAGCCTTACTGCACACCCGTGCCACCCGCCCTTGCCCCGTCAGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTCAGCCTCAGCTCATTCTCTCAGGCAGTCCCAGCATTGGCACGGTACCTCCTCCCGCTGTGGGCCACACGTCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTGCTCCCTGTCAACCCTCCTGCCATCAGCACCACCACCAGCGACTTGTCTGCCCGGGAGGATGCAACACCATC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGCCTCCACCGGCCACCTTTCAGTGTTTCCTGCTTTCCAAGTAAAGATACCAGCAGTGCCCTCAGAGCAGACCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GCCAGAGTTTTTCTGAAGCCTCCCACAGGGTGCTCCCCGGAGGAGGCCCGAGATGCTCTCGTGACTTTGGAGCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGGGTGGCTGGCCACCTTGGCCTGGGCATCTTTGGGGTGGGCTTCGGGAGCCCGGCACTGCTGCAGAGTGTGGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGATGAGAACAGCTGCTGCTTGCTGTACGTGGTGGAGGACCAGCTGTGTGATGTGGAGCAAGCCTTCAGAGCTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGCATTTGGGCCAACACCAGAGTGGTTCGGGAACAGGATGCAGACATTGTCCTCAACGACCAGCGGCACTTTGA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TCCGGTTTTCCAGTTCTTGCACAAGCAAGTTTGTGTCAGCCACGCCCTGGGGAGGATCCACTGGATCACCGCCG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCACTGCCTGTTCCCGGCGGCCTCTCCGGCTTCCCTAAAGAGAGCAGCTTCCCTCGAGACCAGAAGCCAGAGCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CACCCTCCCTTGTGTCCAGGTGGGACTTTCTACAACGCTGCTGTGCACGACGTGGATGCCGTATGCATGTTGCT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GGGGGAAGCCACTCCGGACACTGTGTTTTCTCTGGGACATGTCTTCTGCCCAGATATGGCCGCCTTAAAAGATG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CAGATGCTGTTGTGATCAGCATGAAGTTTCCCTGTGAGGCCGTGGTTAGCGTGGACATCAGCCAGCACTGCACA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GACAGCTGCGACCAGGACGTCAGCCAGCACTGCACAGACAGCTGCGACCAGAGACTGGAGATGGAGTCTTGCCC 2220
Query 1 ----------------ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCT 58
.||||.|||.||.|||||.||||||||||||||||.||||||||||||||||||||||
Sbjct 2221 TGTCACCCAGGCTGGAGTGCAATGGTGCGATCTCGGCTCACTGCAACCTCCGTCTCCCAGGTTCAAGCGATTCT 2294
Query 59 CGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGG 132
..||||||.||||.|||||||||||||||||||.|||||||||||.||.|||..|||||||||||||||||||.
Sbjct 2295 TCTGCCTCAGCCTTCTGAGTAGCTGGGATTACACGCGTGTGCCACCACGCTCGGCTAATTTTTGTATTTTTAGT 2368
Query 133 AGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-------------------- 186
|||||.|||.|||||||.||||||||||||||||||||||||.||||||||..|
Sbjct 2369 AGAGATGGGATTTCACCATGTTGGCCAGGCTGGTCTCGAACTACTGACCTCGTGATCCACCTGCCATGGCCTCC 2442
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2443 CAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCTCGGCCTAAAAAACAATTTTCTTGAAGAATCCGATTTTG 2516
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2517 TGCATAGTAATGACACAGCACCATTCCTGAGAAATAGGAAATATATGTGTGTGGTATGAAAAGCCCATATTCTG 2590
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2591 TTCTTGTCACCTGAATCTAGGCTTCCTCTTTGGATGTGAACGCGGGAATGAACAGTGGCTGTTTTCCACCCAAA 2664
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2665 GGGGCGTGGAGACCTTTTGGAAACGGGCTTTCTCCTTTCCATTTTGCAGCCGGGGGCGGGTGGAAACCTTCCTT 2738
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2739 CGAAGGGTAGTGCCTTGGGGAGCAGCAGACCTGCTCTGAGTCCAGCTTAGCTTTCCAAAATTCTGTGTGGAACT 2812
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2813 TACTGGAGATGTTTTTATATATTTGAAAATAATGGCCTGTATTTCTCACGCTATACTTAAAAAAAATAACTAAC 2886
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2887 CTTTTAAACAAAGATATTCAAACTCACCCTTGTGCTGAAAGCACTCACATTTCTGTGTTCATTCCTGAAAGGGC 2960
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2961 GTTTTAGAGTCCCCGTTTCTACGTTCTATGTGGCACCCTCTTGCCGAGGGAACATCCAGAATCCCTCCACTTCC 3034
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3035 TGTCTAGTTTGAGGCCTCAACACCTTCATGATCCAGAGTCCTGCGGCTATGAGGGGGTGGGCCCACCACCGCCC 3108
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3109 AGCCCTCCTTGGTGGACGTGGGGACAGGTAGGAGCCTAGGGAAAGGGGTGGGCGGGCTCTGGTGTGACGGCGTG 3182
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3183 AGCGCTAGCCAGGAAGATGGGGCCAGGGCTTGGCATGGCACCTCACCTGTGGGGGAACTCGGCGGAGCTTCCTG 3256
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3257 GCGGCATCTCCCCCTCTTGCCTTGGTCCTTTCTATCTTTGTTTTAGGCCAATTTCTAAAAAGACTGAGGCCTCC 3330
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3331 TTCAAGGTTGAACAGATTTCTAGAGCCTTGTTTTTGCTGTGACAAGTCCCTAGTCCCTGTTCACAACTCTGAAA 3404
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3405 CCAAGAAACCTGAGAACCAAGAGAACTGAAATGAAGCCCGTTGGTCTCAGCCTGGCTTGAGCCAACATGAGGCT 3478
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3479 CTCTGCTGCCTTTTGTTTTCTTAGGTTTTGCTGAGAAACGGGAGTGCGTTCTGTGTCGGTGTTTGTGACGCCCT 3552
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3553 GAGACCCTGCTTGGCCTAGCTAAAGTCCAGAAGGCCTGGGCCCCACAGGGCTTGGATGAGGGCTCATGGGCCTG 3626
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3627 TACTTCAGGAGGCCTGAGAGGCCCGGTCAGTCCCATGAGGCTACTCGGCTTGGCCCGCAGGTCCTCCGAGGCAC 3700
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3701 AGGGCAGAGGGACACCCCAGGGACCCATCAGACTCACGACACAGAGAAACTCAAGTGGGGTGCCAGGGCCGGCC 3774
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3775 ACAGAGGCCACGGGCTTCCTGCCTGTGAGGAGCCGCCCTGTTTGTCTGAGCCCTTTGGAGATTTAGGTTGAGTC 3848
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3849 ATGAGAACCGGTCATTGGAACATACACTTTATTATGTTACAAAAACAAAAATCCCCACTGAAACACAGCTAAAA 3922
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3923 AAATAACACATTTTCCCAAGATTACATTACCAAAAACAGTTGTTATGTCATTGGAGGGCGTCCATTAATACTGC 3996
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3997 TCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGTGCTTTAA 4070
Query 187 ------- 186
Sbjct 4071 CTGGTAA 4077
