Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15487
- Subject:
- NR_033850.1
- Aligned Length:
- 2500
- Identities:
- 160
- Gaps:
- 2314
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGCTAATCTGCGTCAGCTGGGGCTGTATTTGGAAGAAGAGGCGCTGCCTCCAGTCAAGTCTGTTTTTTTCAGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGGGACTGTAGGCCTTTGTGCCCTGCTGGAAATCGTGAAAAGCAAGAGAGAAGAGTCCCAGTTATTCTTGCTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTTTGATAAGTGAATTTAGGGCAACTACTAGTGCCAGTAGGCATGGGGGATCTACCGATGAAGAAGACACAAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTCTCCGCTCTCGTGGAGTTTACAGAGAATAATGAATGAGATTAATTAAGAAATGAATGAGATTAATTGAATGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AATTGCCAGACTGAATGAAGTGAATGGCCTGAATATAAACAATTTCCAAATACAGATAACACTGCATATCTGGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTTTGCAATACTCCCTTCGCACTTGAGGAAGAAGCACTATGTCTGGGGCCAAGTGTGACCCTTTGTCTGTTGCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGGTACCTTTCATTTCGCACTTTCTCCTCTGCTGCTCTCCAGAGGAAGTTATTGTCCCAAAGTTGTGTGTCATG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCCGAAGTGTCTGGGATCCCCGAGTGCCTGTGGTGCCCAAGAGCTATGAATCTGCTATCATCAACACAGAGGGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACCTTCTGAATGGGCTATGTCTACAGTGATGCTGCAAATGGAAGCTAACCCTAGGATGACTGGCCTCTGACACT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGAGCCATCCCATCATCTGTCATGGGTTGACCCATCCATCCCCTCAATGAGCCTGACCTTCAGGACCACTGACA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GAGGAGCAGTCAATAGAAATTAATTGTTAAATACCCAGAAAATCTGAAATGGTATTTAATATGCAGTTCATCAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAGCAAAAGTTCCTTAAATCTTCATCTAGAAAAGTTATTTATAAGGGATGAATATGTTGTATGAATATGTTGTA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGCAAATATTATATTCAAGGGCAAGACCATGAAAACAGTTTAAGAATCCGACAGGGAATTAGATAAAGACATCG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAGTGCACTTGTCAAAATACAGCTATCAAGAATGATGATGTTGAAAAATAGTTTAGCAATATAATTGTCTAGAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCACAGGGAGTCTGAGATTTTACCCAACTTGTGAGTTAACAACTCTGCTATAGCTTCATGAAAGAAGACACAAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACTCCTGGGTCAGGAACAAAGGTCTCTAATACTCACAGCAATATCAGGAGCCAGAATTTCAGGATCCTTTTTCC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGCCAGTTTCTCAAGTCCTAATTACCACCGAGTTACAGGAAAGGGCCAGGTAACACTAGCACTGCCATCAGTGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTGTATTACAGAACAGGAACTCCAAGCTTAGGAAACCCAAATCTTTTATAGTTAACAATGAACACATCTGCCAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGTTCTGAAGGGAGACGCTACCCCAATCTTCCACACCTGTTCACTATATAAATATCTGTGAAAAGATAGACAGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AAAATAGGTGGAGAATGCCTCTGCTCACAAGATGTGCAGAAACGTGAGAGGCTCATGGAGAACTGTTTCCCTAC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AATGACAAAATGCTGACGATATATTGTTATGTAAAATAAAGCAGGCATTTTTCACCTCATTTTCATGAAATATA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTGTGTTTATATAGATATTTAGAAAAGTATGAAAGGACATTCATCCAGATATCAATAGAAGAGTTTATTATTTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGCTAGTTGTAAGTTCAAACTTTTCTAGTAAAAATAGATTACTTGTGAAATTATTTTTAATCTTTTTTTTTTTT 1702
Query 1 ----------------------------------ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTC 40
.|||||||||...||||||||||||||||||.||||.|||
Sbjct 1703 TGAGATGGAGTCTTGCTCTGTCGCCCAGGCTCGAGTGCAGTGGCATGATCTCAGCTCACTGCAACATCCACCTC 1776
Query 41 CCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAACT 114
|..|||||||||.||||||.||||||.||||||||||||||||||||||.|||.|..||||||.|..|.||.||
Sbjct 1777 CTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTATAGGTGCATGCCACCATGCCCAGCT 1850
Query 115 AATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-- 186
|||||||||||||||||.|||||||||.|||||||.||||||.||||||||||||||||||||||||||..|
Sbjct 1851 AATTTTTGTATTTTTAGTAGAGACGGGATTTCACCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCGTGAT 1924
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1925 CTGCCCACCTCGGCCTCCCAAAGTGCTAGAATTACAGGTGTGAGCCACTGCACCCCTCCTAAATGTCAATTTAA 1998
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1999 TAACTGAGGGAGCCCTTAAAATACCCCGCTGACTTCCACACGGGTGTGTAAAATAGAATCTGCTCACGTCTTAG 2072
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2073 AGGAGATAAGTACATGCTTAATGTTCTTAGGAGAGACCTGCCTTTTGACATGGAAGCTGTGGTATTGTTGACAA 2146
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2147 GAGCATACCTCCTTAAACCATGCAAACCACGTTCACATCAAAGCTGCCTACGAATGATTATTTTCCATGATGCT 2220
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2221 ATGCTCCCTCCTGCCTGCCTCAGTGGCAAGTGTGACTCAGCAAGTGTATCCAGGGCATCCCTCACTCTTACTTA 2294
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2295 TTTTTGCCAAATGCAGTGGAAATGTATAGACTTTTTTTCATATTTATGTTGGCTGCAGAGCATAAATCTGAATA 2368
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2369 GGTTCTCCAAAGTAAGCTTTTTCTGCATGCATTTGCTCCCAATGATGATAGGTATTATGAATTGCTTTATAGTA 2442
Query 187 ---------------------------------------------------------- 186
Sbjct 2443 ATCATTATCCTTTTCCATATGTTTTACGGTTAGTCTGTGCTATAAACTTGTTTGATTT 2500
