Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15487
- Subject:
- NR_038392.2
- Aligned Length:
- 3062
- Identities:
- 162
- Gaps:
- 2876
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACGCCGCCTTCGCCGCTGGCTCCGTCTGTTGGGGGGCGAACACGCCGCGGTCCTCGTCGTGGTGAGCGCAGCCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCAGGCTGGTCCTGGGGGTGGGGCTGTAGGGGAAAGTGCTAAAGCCGCTGAGATGGCTCTGAGAGATTCCTCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGAATCTGTTTTTAGCTATCAAGTGGCATCCACGCTTAAACAGGTGAAACATGATCAGCAAGTTGCTCGGATG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAAAAACTAGCTGGTTTGGTAGAAGAGCTGGAGGCTGACGAGTGGCGGTTTAAGCCCATCGAGCAGCTGCTGGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATTCACCCCCTCTTCAGGTTGATACTGCCTGGATGGTCACCTCTGGTGCGCAGCAAGTGCAAAGCCAGTGGGGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACTTTCTCACAGCTTACATAGCCATCCAGAGATCCACAGCTACGTCACTGAATTGTTAATGCACATTTGTACTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGTTTCTCTGTATCTATTCACAGGCAACAAATACTTATATGTGTGATCTTTCAGGGAATGTTTTGTTTATTTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTTTAAAAGTATTGGGAATCAGATTAAGACAATCAGTTTCAGAGAACCAGGAGGTTTGGGGTTAAGAGATACTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAAAATTTTCACAAGCCAAGTAGGGCATATATCAGATTTGGCCAACTGAATGGCGTCTGTCCTGTCATCCATAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGTGCCTGGAAATATTTACCAGTCAAGGTCAAGGTCAGCATCTGTGGTTAAAAATATAGCATTCTGACCTAAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAGTTATTTTGCAGATGAATGTGTTTTCAACTCAGGACCTATCCAAATGAGGAATTTTTAAATATTCTTTTTTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTTCCTATTTTTAGACATCAATTCTATAGATTCTGACTTTTTCTAACCTCTTATAGACATGCCAAATGCTGGCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAAAGAAGTGCTTTTTGGATATGGCAGCACTTGTAAAAATAAAGCAGTAAGCAAAATCCTTTTAAACACAGAAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCCTGAGTTCTTCTCATTGGTGGACTCAAGCAATTCTGTAGCAAATAAATCCTTTGAAAGAGCTCCAAATTGGT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGCATTATCCTTTCAAAATCTCAGGGATTTGGGATGAAGTGAAGAGGTCAAATTACTTTTTAGAAGAAGGGAAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTAAAAACCATCTCTCCTAAACAAATGGTAGACTGGCTTTACTTAAGGGATATTTGTCTTTATAGGAGTACATA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AATTTATCTTAATGATATTTAAGTAGTTTTTTTTTTTTTTTGAGACGAAGTTTTGCTCTTGTTGCCCAGGCTGT 1258
Query 1 AT-GCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCC 73
|| |||.||||||.|||||.||||||||||||.||||.|||||||||||||||.||||||.||||||.||||||
Sbjct 1259 ATCGCAATGGCGCGATCTCTGCTCACTGCAACATCCACCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCC 1332
Query 74 TGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAACTAA-TTTTTGTATTTTTAGGAGAGACGGGGTTTC 146
..|||||||||||||||||||....|||||.||||.||.|||| |||||||||.|||||.||||||||||||||
Sbjct 1333 CAAGTAGCTGGGATTACAGGCACCCGCCACCACACCCAGCTAATTTTTTGTATATTTAGTAGAGACGGGGTTTC 1406
Query 147 ACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---------------------------------- 186
|||.|||||.|||||||.||||||||||.|||||||||.|
Sbjct 1407 ACCATGTTGACCAGGCTAGTCTCGAACTTCTGACCTCAGGTGATCCACCTGCCTCAGCCTCCCAAATTGCTGGG 1480
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1481 ATTACAGGCGTGAGCCACCTTGCCCAGCCAATTTTTTTTTAAAGAGACATGGTCTTGCTATGTTGCCCAGGTTG 1554
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1555 GTCTTGAACTCCTGGCCTCAAGAGATCCCCCCAACCTTGGCCTCCAAAGTGCTGGGATTACAGGCATGAGCCAC 1628
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1629 CGCGCCTGGCCTCAAGTAAGTTTTTATACCATGATAGGGGAAAACCTGGAAGGCTAAGAGATGTGCTGTTTTCC 1702
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1703 TTCATGGGACCCCACTTTCCACAGTAAACAACTGGTATAATCATTTATTACGTTGTATGCAAATTTTGCCTTAG 1776
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1777 ACAACATTTGTCTGGTTCCTTATTAATAACTTGCATCTGATCTGCTTAGAGTTGCTTAATTATAAGTAAATATA 1850
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1851 ATCCCAGTAGCATTTAGCCTTAATCTCAAGAGTTCAAAATGTTTAACACATTCTACCTGACGGGAGGTGGTGAC 1924
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1925 CTCATTCAGTCGGTTAAGAGCCTGAGCCCTGTGAAGTTAAACACCTGCTCATGGTCACATAGCCCAGGCAGAAG 1998
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1999 AAAATCTCGGACTTGGAATAGATCCCAGTTGCCTGATAATTCATCTCATTATTGCCTCTAAAGCAAATTGGAGA 2072
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2073 CTGGGCACAGTGGCTCCCACCTTTAATCCCAGCACCTGGGGAGGCTGAGGTGAGTGGATCACTAGAGGTCAGGA 2146
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2147 GTTCAAGACCAGTCTGGCCGACATGGTGAAACTCAGTCTCTATTGAAAATACAAAAATTAGCTCAGTGTGGTGG 2220
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2221 CACACACTTGTAATCCCAGCTACTCAGGAGGCTGAGGCATGAGAATCGCTTAAACCCAGGAGGCGGAGGTTGCA 2294
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2295 GTGAGCTGAGATCACACCATTGCACTCTAGTCTGGGTGACAGAGCGAGACTCTGTCTCAAAAAAAAAAAAATAA 2368
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2369 AGCCGGGCGTGGTGGCTCACGCCTGTAATCCCGGCACTTTGGGAGGCTGAGGCAGGCGGATTGCCTGAGATCGG 2442
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2443 GAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCTTGTCTCTACTAAAACTACAAAAAAAATTAGCCAGGCGT 2516
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2517 GGTGGCGGGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGCAGAATCGTTTGAACCCGGGAGGCGGAGG 2590
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2591 TTGCAGTGAGTGGAGATCGTGCCTGTGTGCTCCAGCCTGAGCAACAAGAGCGAAACTGTCTCAAAAAAAAGAAG 2664
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2665 AAAATAAATAAATAAAAATCAGAGCACAAGAAGTACCAGTCCACCAACTCACATTTTCTATATTAATAATTCTT 2738
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2739 AACTAAAAGAAGTTCCATATTCGACAGCATTTTAGTTTTTTAATAGTACTTATTAGCATCAACCATCTTGATAA 2812
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2813 TCACCAAGGGAAAAATTAAAAATACCTAGACTGCAATAAACCTTTAAATTGGATTTTCAGTGAGAATTTAGAAG 2886
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2887 CAATCACTACCTTTCTCGTTTCATTTGTGTAACCATGCAGCATAGGCACTGTGTTACATCATCTTTACGCTTTG 2960
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2961 GTATTTGAACTTATTACAGAATTTTTTCTCTAAATTGGATGTTTCTTTATATGACCTTGGAAACTGAAGTGATC 3034
Query 187 ---------------------------- 186
Sbjct 3035 TTAGCATTAAACAAAAATGCTTTTTGAA 3062
