Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15487
- Subject:
- NR_040712.2
- Aligned Length:
- 2187
- Identities:
- 163
- Gaps:
- 2002
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTTCTCTCGCGCTTCCATTCGGCAAACCCGAGCTCTTTGTTCAATGCCTAGCCACCTATTCCTACAGACACGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGTGGAAAGGAAAAGAAAGTACTGACTTACAGTGATTTAGCAAACACTGCACAGCAATCAGAAACTTTTCAGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTCTTGCAGATATATTACCAAAGAAGATTTTAGCTAGTAAATACCTGAAAATGCTTAAAGAGGAAAAGAGGGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAAGATGAGGAGAATGACAATGATAATGAAAGTGACCATGATGAAGCTGACTCCTAAACCAAAAGTGCTTTAAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AACCAGCCTGGCGAGGACAGCCCTGGACCCACTCCACTGTCTCTAAGTAAACACAGCACTGCCCGCTTTTAGCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCTTCACTTCTTCACAGAGTTCCAGTGTGTGGTATTCTTTCGAGGTATTCTTTCCAGGCCGAGATTGAGCACCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CATGTACCTACGCCACAGACAGCCAGAGGGAAAGCGACCCAGACAGCAGCCCCTCCTCGACAGGCCCACCCTGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGCTCAGGCACCAAGAAAACAGCCGATACTGGCAGCCATTGCAGCTCCAAACTGCAGAGGCAAGGCCAATTTTA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACTTTTCAATTTACAGTCGATTTTGAAGAGCTTCTACATATCGGTTATGTAAATTCATATATGTATATTTTGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATCAGTTCTTATAAACAGCTCGATTCAGTTTTAGCTAAATTTATAGTTTAGGTAGTATGTTACATTTGAATTTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGTCTTAAGAAAAGTTGACTGTTCAGATATTTTTCTACTGTAAAGAAATATACTTTTCTATTAAAGATCTGTAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATATTTTTACAGTAAAATGCTTTATGGAACTAGTTTTAGAGCCCTCTATGGCTTTAAGGCCTTGCTTACTGCCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCAAATTTTGAGAAATTTAAAAATAAGCATTCTAACACTTTTATTCCCACAGAAAAATTCCAAGTCAAATTATC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAATCAAATACAAAAATAAGTCTTACCTCTTGTATAAGCATGTTGTACTAAAAAAAAATTTTGAAACATTTTGT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATATTGGAGATCTCTCTCATCTTACTGTTCTTTGCTTTAAATTCCTGGCACTTCTTTTTACTGTCTATAAGAGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAACCTATCATAAGCCCAATTTTTTTTTTCCACTTAGGGTAAATGTTTGGCTCCTCTCATTTCATTATCTTTTT 1184
Query 1 ----------------------------------------------ATGCAGTGGCGCCATCTCAGCTCACTGC 28
.|||.|||||||..||||||||||||||
Sbjct 1185 TTTTTTTTTTTTAAAGACAGATTCTCACTCAGTTGCCCAGGCTGGATTGCGGTGGCGCTGTCTCAGCTCACTGC 1258
Query 29 AACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCA 102
|||||||..||||||||||||||.|||||||.||||||..||||||||||||||||||||||||||||||||||
Sbjct 1259 AACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCATCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCA 1332
Query 103 CTACACTCAACTAATTTTTGTA-TTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTC 175
|.|..|.||||..||||||||| |||||||.|||||||||| ||||||.|||||||||||||.|||||.|||||
Sbjct 1333 CCATGCCCAACCTATTTTTGTATTTTTTAGTAGAGACGGGG-TTCACCATGTTGGCCAGGCTTGTCTCAAACTC 1405
Query 176 CTGACCTCAAG--------------------------------------------------------------- 186
||.|||||||.
Sbjct 1406 CTAACCTCAACTGATCCACCTGCCTCAGCCTCCCAAAGTGCCGCCGGGATTACAGGCGTGAGCCACCATGCCTG 1479
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1480 GCCTTCATTATCTCTTTTTTAAAAATGAAAAAGTTTATAATTTACATTCAGTAAAATCACCCTTTTTAGTGTCT 1553
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1554 AGTCTGTGAATTTTGACAAATGCATGGTTTTGTAACCAATCGATAGGACAGTTCTGCCACCCAGGACATTCCCC 1627
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1628 TCTGTTCCTCTGTTCCTCTCTTCTCCTGCCCCCTAGCAACCACTGGTGTTTTCTGTCCCTCTTGTTCATTGACA 1701
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1702 TTTATTTTAAAATAAAATATTTTAAAATCTACTTTTTGGTGTACAGTTCTGAGTTTTGGCAAATGCAGTCAAGT 1775
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1776 CACTACCACCACCACAATTAACAGCTATATCACCCTCCAGTAAATTCCCTGTGGTCAGCTCCTTCCCCACCTTT 1849
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1850 TACCGTGGCAACCGTCAAGCTATTCTCTGTCCCTATACCAGGTGTCATCAAATTTTTTTCTGGAAAGGGCCATG 1923
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1924 CAGTAAATAGTTCAAGCTTTGTGGGCTTTTATAGTCTCTGTTGCTGCTGCTGAACTCAGCTGTTGTAGCACGAA 1997
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1998 AGCAGCCAGGTAATTACTAGATGAAGGAATGCAGGTGGCTGTGTTTCAATAGAGCTTTATTTCTGCAAACTGAA 2071
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2072 ACTTGAGTTTTGTGTAATTTTCATGTGTCATGAAATACTGTTTTCTCCAACCATTTAATAATGTAAATACTTGC 2145
Query 187 ----------------------------------------- 186
Sbjct 2146 TAGCTTATGTGCCATTAAAAAATGACTTGATTTGGCTTACA 2186
