Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15487
- Subject:
- NR_046702.1
- Aligned Length:
- 3103
- Identities:
- 166
- Gaps:
- 2919
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTTTGATCTCAGCATGTGCTGATGGAGTAATGAAATAAAGACAACACTCTGCAAATGGCTGGATACATTAAGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGAAGCAACTTGTAAAGCACCCAGGAAAATATCTGACACATTGAAGATGGCAGGATCTGCCTCAGGGATCTGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCAAGCAACGTGGGATCCCCACTTTTTCACTCTGCTGAATACTCGACCATATTACAAGGCAACAACTGTTCTAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCTGGAACTAGAGCATGAACTGGAATGAGGAAGGACCAGTAAGGCAAAGTGAAACACCCAAACCACCAGCATGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCCCATCCAGAATGGTACCTGTTCAGGCTTCAGACCCGGCGGGACCCAGGCATACTCTTCCAAAGCACAGCCTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGTCATCATCTGAGGTCGAGTTCCTCTGAAAGTCAAACATGAGTTTGCTGATGGTCTTCTCCATCTCCAGCGGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATCACTGTCACCATGTGCTCCTCCTGGGGACACTTGCAGTGCAGGCAGATCTTCCTGCAGGCAGTAAAGGTAGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGGTGAGAAAGAGGAAAAAACCTTTTTTTTTTTCCAAGAGCCTGCCAGTCACTAGCCCCTGGATCCCAAACCAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAACACATTCCTTGGCAATGGGCATCGGGCAAAGGCATCGCGAGCAGTGTTCCAGAACATGACTGTCTTTGCAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGGGCGTGGTACACGCATGTGAAAACAGCATGAAAGGTCAGAGGCCACCAGGTAAGCATGCTAAGGGTGTTTAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATGTGGACCCCAGCCTTCTCTTCTAAATCAATACCCCAAGAGGAATGGTAATATAGTTTTTATTTTACTAGGTA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GACCACTGGATATGGCCCATGACCACAATTTCCTTGACTGCAATAGCAATTAAATATACATAATACATATGTTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACCTGAAGTGTTACTTGTAGATTTAACAAATACTGACAACATACTGCTTTTATAAAAGGTTCCTAAGCCCTGGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAATGGAGAAAATGGTTTTAAAAATGCAGGTAAAATGTTCTTTAAGAAGAAGAGCAAACATACATATTTTTTCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CATGAAACGTATCTGGCCCTAAGATCTCATAGGAAAGACAATTTCACCTCCATTAAAGATCCCTGTAGGTTTGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AATTCTAATTAGAAACCCAAATTTTCCCTATGTTGGTGGGGTTTTTTATATACAAGAAGATCATGCATGTGAAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TATTTCAAAAGGTAGCAGCCAAAGATAAAAATCTCCCAAACTGAACATTTCTCTTTTAAGGTTACCATCTGTTC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCTTATCCATAGCTACAGAAATGATGAAGCAATAAATATGTTGATGTCAGCAACACAAAAGCATTTCTAGCTTC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CACCAATAAAATAAAAAGAGAGAAAAAAAGAATAGAGGAGGAAAATTTTAAGGAAATAAGTTATTCCATGTTCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTCTTTTTAAAATTATTAGTTTCCGTAGCACCTTATAAAGGTGATAAAAGAGCCCAGAATTTTAATCCCCAGAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GTGCCTGAACGTTCTGATAACAGCTTTGTGAAGATACAATGTACAAACCATAAAACTCACCATTTCAAAGTGTA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CAATTCATGGACTCTTAATACATTCGGAATTGTGAATCATCACTATCTAATTTTCATCCCCTCCCCAAAAGAAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CCCCAGGAGCATTGGCAGTTATTTCCCATATCCCTCTGCCCCCAGGCTCTAACAACCACTAATCTATTTTCTGT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CTCTATGGTTTTGCCTATTTTGGACATTTCATATAAATGCAATCATATAATATGTGGTTCTTTTGAAGTTGGCT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TCTTTCACACAGAATGACTTTTCAAGGTTAATCCAAGTTATAGCATGTATCAATCCTTCATCCCCTTTTATTGT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGAATAATATGCCATTGTATAGATATACCACATTTTCATTGATCAGTTGTGCACATTTGGACTATTTTCACCTA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGGCTTTTATGAATAATGATGCTCTGATTACTTATGTATAATTTTTTGTGTGGATATTTGTTTTGTTTTGTTTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GTTTTTTGAGACAGGTTCTCATTGTTTCCCAGGATGGAGTGCAGTGATGCAATCACGGCTCACAGCAGCCTTGA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CCTCCTGGGCTCAAGCGATCCTCCTGTCTTAGCCTCCCAAGTAGCTGGGACCACACAGGGGCATGCCACCACGC 2146
Query 1 ---------------------------------------------------ATGCAGTGGCGCCATCTCAGCTC 23
.||||||||.|||||||||||||
Sbjct 2147 CTGGCTTTTTTTTTTTCTGAGACAGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGTGCCATCTCAGCTC 2220
Query 24 ACTGCAACCTCCAT---CTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGC 94
||||||||||| | |.|||||||||||||.||||||.|||||.||||||||||||||||||||.|||||||
Sbjct 2221 ACTGCAACCTC--TGGCCGCCCAGGTTCAAGCAATTCTCCTGCCTTGGCCTCCTGAGTAGCTGGGACTACAGGC 2292
Query 95 GTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCT 168
.||..||||.||.|.||.|||||||||||||||||||.|||||||||||||||||.||||||||||||||||||
Sbjct 2293 ATGCACCACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCT 2366
Query 169 CGAACTCCTGACCTCAAG-------------------------------------------------------- 186
.|||||||||||||||.|
Sbjct 2367 TGAACTCCTGACCTCATGATCCACCCGCGTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGCCCT 2440
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2441 CAGTCGGATATATGTTTTTAATTTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCGCCCAGACTGGAGTG 2514
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2515 CAGTGGCACGATCTCGGCTCACTGCAAGCTCCACCTCCTGGGTTCGTGCCATTCTCATGCCTCAGCCTCCCGAG 2588
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2589 TAGCTGGGACTACAGGTGCCTGCCACCATGCCTAGCTAATTTTTTGTATTTTTAGTAGAGACCGGGTTTCACCA 2662
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2663 TATTAGCCAGGATGGTCTTGATCTCCTGACCTCGTGATCCGCCTGCCTCGGCCTCCCAAAGTGCTAGGATTACA 2736
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2737 GGCATGAGCCACCACGCCTGGCCAAAGTTTTTAATTCTTTTGGGTATATTCCTAGAAATGAAATTGCTAGGTCA 2810
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2811 TGTGGCAACTTTAGATTTAACATTTTGAGGAACTCCCAAATTGTTTTCACAAAATATCTGTACCTTTGTACATT 2884
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2885 CCCACCACTGATGAATGAGTGTTCCATTTTCTCCATATTCTTGTCACATTTGTTATTGTCTGTCTTCTTTTATT 2958
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2959 GTAGCTACTATAGTGGGTATAAAACAGTATTTAATTGTGGTTTTGATTTGCATTTCCCTAACGTCTAATGATGT 3032
Query 187 --------------------------------------------------------------------- 186
Sbjct 3033 TGAATATCTTTTTATGTGCTTATTATGTATCTTCTTAGAATAGAGACATGTCTATACAAAAAAAAAAAA 3101
