Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15487
- Subject:
- NR_103464.2
- Aligned Length:
- 4694
- Identities:
- 134
- Gaps:
- 4542
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGAAGCTCCGCGGTGCCTGATGGGGCCGTTGGGCGGCCGGTAGCTGTTGCTGTTGGGGGACCCCCTCATTCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCGCTGCCGTCCCTGCTGCCTCATGGCGGCCATCGGAGTTCACCTGGGCTGCACCTCAGCCTGTGTGGCCGTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TATAAGGATGGCCGGGCTGGTGTGGTTGCAAATGATGCCGGTGACCGAGTTACTCCAGCTGTTGTTGCTTACTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGAAAATGAAGAGATTGTTGGATTGGCAGCAAAACAAAGTAGAATAAGAAATATTTCAAATACAGTAATGAAAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TAAAGCAGATCCTGGGCAGAAGCCAGAAATGCGGTCCTTGGACCTGGCTTCTCAGCAATTATCCCTGAGAGGGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGATCCTGGAGATATCCTGAGAGCACACAGAGCTTCCCCACACCTTCAGACTTGCACCTTGCTGTCCAGAAGCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCTAGCCCTCCTTTCCAACCCACAATGGCCAGTGCCAATAGCAGTGCGGGCATCCGGTGGTCCAGACAGGAGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CACGAACTCTTCTCTCCATACTAGGCGAGGCAGAGTATATTCAGCGCCTCCAGACTGTGCATCACAATGCAGAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTCTATCAGGCTGTGTCTAAGCGAATGCAGCAGGAGGGCTTCCGCCGCACCGAACGTCAGTGCCGCTCCAAGTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TAAAGTTCTGAAGGCATTATATTTAAAGGCCTATGTTGCCCATGCCACAAGTATGGGTGAGCCACCACACTGTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CATTTTATGATACGTTGGATCAGCTTCTCCGAAATCAGATAGTGACTGACCCAGACAACTTAATGGAGGATGCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCTTGGGCCAAGCACTGTGATCAGAACTTAGTGGCCTCTGACGCCCCAGGGGAAGAGGGAACCGGCATTCTAAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATCAAAAAGGACTCAGGCAGCTGATCATCAGCCTATCTTGAAAACAGTTAAGGCATCAGATGAGGATTGTCAGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TAAGAATCAGTGACCGGATACGAGAAACCAGTGACCTTGAGGACTCCTGGGATGAATCCTCGGGTGCAGGGTGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCTCAAGGGACCCCCAGCTACAGCAGCTCCCACAGCCTTTTCAGAGGTGCAGTTGCTCCCTGTCAGAGCAGCCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CATGGCCAGACTGGGTGTGTCCGGGGAGCCCAGCCCCTGCACCAGCACCAACCGCAGCACTCCTGGGGTAGCCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCACACCGCAGACTCCAGTCTCCTCTTCGAGAGCTGGTTTTGTTTCTGGTGGGGATAGGCCCTTGACCAGTGAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCCCCTCCAAGGTGGGCAAGGCGAAGAAGGCGGTCAGTGGCCAGGACTATCGCAGCCGAGTTGGCAGAAAACAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GCGATTGGCACGAGAACTCTCAAAGCGGGAGGAAGAAAAACTGGACAGGCTGATTGCTATTGGTGAGGAGGCCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GTGCTCAGCAAGATACTGCCAATGAGCTCCGCAGGGATGCTGTCATCGCAGTCAGACGTTTGGCAACAGCAGTG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GAAGAGGCAACTGGTGCTTTTCAGCTAGGCCTTGAAAAATTGCTTCAGAGGTTGATTTCGAATACCAAAAGCTA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGAACCAATTACAAAAGGCTCTGCTTCCTAAACTGGTAGAAGTCTAGTTCCCAAACCTGCCTTCTGAATCCCTG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GCTCCTTTTCTGTGTCCTCAGAAAAAAACATGGATGAACCATTTATATCCAGATAGTATGAAAATAATTGCTAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTCATTTTCCCAAGATTCTCCACCAAATGGAAGACCTTTCAGAAATGCCAGGGGTGACCTAATAGAAAACGATG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GAGCCACGTTCTAGACAGCTGGTTCATCCTAGCTTTGTCACAGATGTGAAGCAGTTTACCTCCCTCCAGTGGTT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCCTCATCCGTAAAATGGGGATCAATAATAACTCCTGCCCTGCCTACCTCACAGGGTTGTTGTGAGGATCACGT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGTTCATAGATGTGAAAGGGTTTAAAAGTTTAAAAGCACTGTACACATTTAAGTTATTAATTCATATGGCCTTG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCTGAGGTAAGGCAGATTGGTTTACAAGATACAGAAGTATGGATATATACTGTGACTTCATTGCTTGAATCTTT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CCTTTGCTGGTCTAACTTGACTGCTTCATGGAGTTTGAAATCTTAATTTTTAAAATCCCTGTGTGGCTCATTAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ACGACTATAAGCACAACCTGTATTTGTACCTTAATCTCTTACATTTCCACTGCTGTGTATCTGACATATCTACT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGTAAGCACTGTTTTGTCAAACCGTCTTTCTCTCCTTCATTTTACTGGTTCTTAGTCTCCTATCAATATAAGGA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AATAAGAAGTGCCAGGGAGCCGCCATTGTGTGTTACGGTTTATATCGATAATCTTCAATATAAAATACTGGCCA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TTTTATAAAATATTAAATATATGTAAATTCTTTGCATTTCATATTATTTGGGTCCCTTTATATGCCTAAATTAC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ATCTTTAAGTTTCGGTTGCCATTGGAACATTGTGGAAACAATTCAGATTATATCAGTTTCCCATCCGCTTTTTA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GCTGATTTCATTCTTTTCTGTTATTTTTTTGTCTAGTATGTTATACAGGGCAAGCCCTAGAAACGTTTCCTTTT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GAGGAGCTTTCCAAGATTCCTTTTCCTCAGATGTTGTAGACAGAAGTTTATGTAGTTAATGGCATCTGGTGGAA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GAGAACAGCTTTGTTTCCTCTTTAACTTTGGGAACACTAGAGGATGGTGTGGATAAAGATTGCCTGCAATAGAT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GACTCCTTTTAAGCACTAGCCGTGAACAGATGAGCCTCCTCCACACCCCAGACACACACTGGGGAGAGATGAAG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GTGATAAGCCACACTTCCGATTTACTCTAGAAGGGAAGACATTACTCTCTGTCATTAAACTAACTTAAAGCTTT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TAGTGATTTACTTAGTACTTTTAGGAATACAAATAGGAATCTTTAGGATTTAAAAAGTTTTCCAATAATCTAGA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AGTTGGAAAAATAACAAAGAGTGGGCATGTTGGGGGAGGTTTTATTTTCTATCTTGCAGGCTCGAGTGCTTAGC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TAAATGCTGGAAATGGACATAGGTGGAGAAATGGTCAGAGCAGCAGTGGGAGCGTACCCAGAACCATGAGTAGA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CGGCAAGCGAGCTGCTCTGCCAAGCCAGGGATGGAGGTGTGAGGCGGCTGGTGTGGTAGAATATGTTGGAATCT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 AGTTAGAATTCCTGGATTGGAATCCTGTCACAGTTTGTTTCATCAGACAAATCACTTGCCCTTTTCTATTATTA 3256
Query 1 -------------------------------------------------ATGCAGTGGCGCCATCTCAGCTCAC 25
.||||||||.||.||||..||||||
Sbjct 3257 TTATTTTTTTTTTTTTGAGAAAAAGTCTCACTGTTTTGCCCAGGCTGGGGTGCAGTGGTGCAATCTTGGCTCAC 3330
Query 26 TGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTG 99
||||| ||||.||||||.|||||||.|||||||||||.|..||
Sbjct 3331 TGCAA--------------------------------CCTCAGCCTCCCGAGTAGCCGGGATTACAGGTGCATG 3372
Query 100 CCACTACA--CTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGA 171
||| ||| |.|||||.||||||||||||||||.|||||||||||||||||.|||||||||||||.||||.||
Sbjct 3373 CCA--ACATGCCCAACTCATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTAGTCTTGA 3444
Query 172 ACTCCTGACCTCAAG----------------------------------------------------------- 186
|||||||||||||.|
Sbjct 3445 ACTCCTGACCTCAGGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGAGATTACAGGCGTGAGCCACCGTGCCC 3518
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3519 AGCCAATTCATGCCTCAATTTCTTTATCTCCGGATTGAGGGATTTGTATTAGATTTTTTTTTTCCTAGTACCTT 3592
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3593 CCAGCTCTAAAAAAATTTGAAATAGCATAATAAAAGACAAAATGAAAACGAAATTTTAATTGTAATATTTTCTG 3666
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3667 TCACAGCAGCATATGTATATTTGAAATACTGGTAACAATTTTAAGGTAGCATTCTGTGGTATTAATATTTATTA 3740
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3741 ATATGCTCATGAACTTCTAAGTGCCACACCAGACATATAGACTCTTTACTTTAAAAGAGCATATATTTAAGGCA 3814
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3815 TTGAAATGGATACAGCTATATTCATTCTCAATTGTCTTAGGCTATTATATGGAAAGATATGTGTCAATTATAGG 3888
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3889 TAGGTAGGTAGGTAGGTAGATTTTCTGGAAACACAGAAGTACTTGACGGAGAGTTAGGCCTGTATTCTATAAAT 3962
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3963 CTATTAATGGTAGCAAAGTGCATAAGACAGGGATTTCTTTGAGATGAAAGGAGTGCTGAAGAAGAGCATTGGAA 4036
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4037 TTAATATTTGGATGTGGTATTGTGAAATTCAATGGGTAAAGTAACCCTAATGTGGGAATAAAAGTCAAGGGAAA 4110
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4111 GGTCTTGAATAAGTACACAGAAAAATAGGCTAAAAATATTAAGGGGAGGGAAATTGGAATACAGGGAGACAGTG 4184
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4185 TGCAAGAAAGCAAGCCAGGAATCTGCCTATGTGGTAGACCCAACCATTACTACTTGAACCCCCTTAGAAAAGCT 4258
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4259 TTTCCAGCATTCCATAACTCAGGTTCCTCATTTATAAAGTGGGAAACTCATAATTGTCCTACCTACCTCACAGG 4332
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4333 GGTGTTGTGAGGATCAAAGGAACAGATGAATGTATGAGCACTTTCAGACATGTAAGGCACTGTCATGTAACAAG 4406
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4407 TAGGGGAAAGACTCTGGAGCACATTAGTGCTGGTGTGTGCCAAGCCCGTGGGCTGTTGACCGTAAGGGATATTC 4480
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4481 AAGTAGGAGGAGGAAGAGAAGATGGCATTGCTAATAAAGGTTGTGATACACAACCATAGGATTAACTGCCTCCT 4554
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4555 CAAGTCCATCATGTAAATAAGGTGCTATGTATACCAACTTCTCACCACCTTTGTTTTTCTGTTCGGTAATCCTG 4628
Query 187 -------------------------------- 186
Sbjct 4629 GTGTGGACAAATAAAGTTTTCACTTGTATGTA 4660
