Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15487
- Subject:
- NR_104275.2
- Aligned Length:
- 3409
- Identities:
- 164
- Gaps:
- 3223
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGTACTGGGCTGGCTGCGGTGGCGCGCGGGCGCGGCACCCGGAAGTCGGCGGCGGTGGCGGAGGCGACCTCGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACCTGTGTCAGCAGAGCCGCCCTGCACCACCATGTGCATCATCTTCTTTAAGTTTGATCCTCGCCCTGTTTCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAAACGCGTACAGGTAACCCCCTCGCTCTGCATCTGCTGCGCCCTGCAGGGTCCTGGGTGCCCAGCCAGTTCTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATGCCACCCAAGCTGCTGTGTGCAGGAAGGTGTGTGGGCCAGGACGGGGCTGCACAGGCCTGGCACTGCCCTCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGGACAGGGTCACTCAGTGTGGGATGCTGTCAGAATGCCTCTCGGGGCGGGGACTCCAGTCAATGTACAAAGAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGAAGACTCAGCCACAGAAGGCAGCCACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCTACAGCCGACCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCCAAGTTAGCTGACTTCTGGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAAGGCAAGGAAGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGGCACATGGCTGGGCATCAGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCCGCAGCTGGACT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGCAGGCCCGAGGGCGAGCACAGCAAAGGGAGACGTCATTTGCTACTATGGGAACCGAGGGGAGCCTGATCCTA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCGTTTTGACGCCAGGCAGCTGCCAGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTGCAGCCCATGCTGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCAAGTACGCGGCTGTGTGCGTGCGCTGCCCTGGCTACGGCACCAGAACCAACACTATCATCCTGGTAGATGCG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GACGGCCACGTGACCTTCACTGAGCGTAGCATGATGGACAAGGACCTCTCCCACTGGGAGACCAGAACCTATGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTTCACACTGCAGAGCTAACCCCACCTCTGGGCCTGGCCAGTGGGCTCCTGGGGGGCCCTGCCTTGAGGGGCAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGTGGACAGGAAACCTTCCTTTGCCATACTGCATTGCACTGCCCGTGGCTTGGCCAGCATCCCCCGGATCAGGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCCTGTGGTTTGCGTGTTACCCATCTGTGTCCCCATGCCCAGTTCAGGGTCTGCCTTTATGCCAGTGAGGAGCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCAGAGTCTGATACTAGGTCTAGGACCGGCCGAGGTATACCATGAACATGTGGATACACCTGAGCCCACTCTTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CACATGTACACAGGCACTCACATGGCACACACATACACTCCTGCGTGTGCACAAGCACACACATGCAAGCCATA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TACATGGACACCGACACAGGCACATGTACGTGCACAGGTGTGCTACACATGTGCACACATGCACAGTTGCACAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACACACACACACAGGTGCACACACACGATGCCGAACAAGGCAGAAGGGCGACTCTCACCTCTCATGTGCTTCTG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCCAGTAGGTCTTTGTTCTGGTCCAACGACAGGAGTAGGCTTGTATTTAAAAGCGGCCCCTCCTCTCCTGTGGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CACAGAACACAGGCGTGCTTGGACTCTTGACAAGCAGACCTGCTCCTGCAGAGGAGACAGCCACATTTGGAATT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGGCACCGAGAAGACCTGAGAAAAACCCACTCTCTCTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCACC 1628
Query 1 ---------ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCT 65
.|||||||||.|.|||||.||||||||||||||||..||||||.||||||||.||||||.||||.
Sbjct 1629 CAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAACCTCCGCCTCCCAAGTTCAAGCAATTCTCCTGCCC 1702
Query 66 CGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACG 139
|.|||||||||.||||||||||||||||||||||||||.|..|.||.|||||||||||.|||||||.|||||||
Sbjct 1703 CAGCCTCCTGATTAGCTGGGATTACAGGCGTGTGCCACCATGCCCAGCTAATTTTTGTGTTTTTAGTAGAGACG 1776
Query 140 GGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGA----------------CCTC---------AAG-- 186
||||||||||.||||||.|||||||||||.|||||||||| |||| |||
Sbjct 1777 GGGTTTCACCATGTTGGTCAGGCTGGTCTTGAACTCCTGACGTGGTGATCCACCTGCCTCGGCCTCCCAAAGTG 1850
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1851 CTGGGATTACAGGCGTGAGCCACCACGCCTGGCCGAAAAACCCACTCTCATAACAGAAGTGCAGACTCATTGCT 1924
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1925 AGATTCAGTGCCCTTGAGTGTGCCAGAGGTCCTCTGTGTTTGAGACAATCCTGTGTGTGCCAGGAGGCTCCGTG 1998
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1999 TGCACCAGGGGCTCTCAGAATCCCGCTTACCCAGCTGGAGACCATGCCTCTGGCAGCCCCATCTCAGCCAGCCC 2072
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2073 TGCTCTCTCCCTCTTCCCTCCAGGTGAGGCAAACTTCATAGGAATCTGTACCTGAATGTGAGCTCCTGATAATA 2146
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2147 AAACTCTGAGGCTTTGGTGAGCGCATTTCGAGGCCTTTCCCTTGTATGCAGGGTGCCAGTGGGAGCTGCTATGT 2220
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2221 CTCCTGTGCAGCCAGACACCCTGGACGAGGCCCTTCCCACCTCCCCCTTTCCTCACGGCTTCTTCAGCACCACA 2294
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2295 TGTGGATGCCTGTGGGTCAGTCCATCTGTCCATGGGCAGGGGCCGCTGTGAGAGACCCCATGCGCGTGGGATGT 2368
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2369 GGTAGATGCTGATTATGGGGCCAGCCACCCATACAGGTCTATCAGGTCGCAATGGAGGCCCCACTGGAGCGGGA 2442
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2443 GGCAGGCTGGCCTGGACTTCTGTTGGATGATGGGGGCCAGGGGATGGTAGGAGGGGCAGGAGAGCAGGTCTGCA 2516
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2517 TCTGTCTCAGCCCCAGGAGCTCCTGGTTTGGGGCCAGCTCTAAGGAGCTTCATCCCTGAGCCTGGCCGAGTATA 2590
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2591 AGGGGGTCCCGGATATCCAATGCTGAGACCTAGACTTTTCTAAGCCTCTGCACCCAACCCCTAACTTGGCCTTT 2664
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2665 TCAGACCCATGAGAGTGCAGGGTGGGTGTGGACCTGCGCCAGGGCTTCCCAGCCTGATTGTGACATGATGTGAG 2738
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2739 TCCACCTAGGGAGGAGCAGGGGCCTCCCCGTCTCTTCCCCTTCTTGCCCAGACCACTTTGCTGGGCTCAGAGCC 2812
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2813 TTCCATGGCTCACTTTGAACTCAGAAGAGTTTCCCAGCTGCGACCCAGGCTGCACCCCCAGGCCTGAGGAGAAA 2886
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2887 CTGAGGCCCCACATCCCATACGTGTCCTCTGAGTCAGGACAACAGGCTCCCGGCTGGGGGCACTGCCCTTGCTG 2960
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2961 CCAACACATTCACCTGCCCCAGTGGCTACCATGTCCTGTGCCGGTGACCAGTGCCAGTCCCCAACCTGGATGGT 3034
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3035 GCCCTGCCCTCATGAAGAGCCCCCCGGATGTTCACCTCTGCCCAGAGACCCGGCCTGCCCAGGAAGAGCAGTCT 3108
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3109 CTGCTCTTGTGTGGGTCCCTCTGCCCCCACCCTGCCCAGGGCTCCCCAGCAGCCTGAGGCCCCTAAGGAAGAAC 3182
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3183 AGCCCTCAATGGTGATTCTATTGGTGTTATGAGTTGTGTCCCCAAAGAGATATATCAGTGTCCTGACCCACAGT 3256
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3257 ACCTCAGAATGTGACTGCATTTGGAGATAGGGTTCTTCCAGGGGTAACCAAGGTAGAATGAGGTCGTTAGTGTG 3330
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3331 GGCCCTAATCCAATATGACGGCTATCCTTATAAAAAGAGGAACATTTAGGCTGGATACAGTGGCTCATGCCTAT 3404
Query 187 ----- 186
Sbjct 3405 AATCC 3409
