Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15487
- Subject:
- NR_110825.1
- Aligned Length:
- 2616
- Identities:
- 160
- Gaps:
- 2430
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTGCCTCCATGTGGAGGGAGATACGGGAAGCTGCATGTCACCACGGAGACTTCCTTGTTCGTGTCTATATGGTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CATACATGGCCTTCCCCTTAATTAAAGATGTCTTCCGAGGAACATTTTGTCTAAGAATAACCCAGTGGAAATCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTCACATAAGAAGTGATAGAACTACACATCTGAGTATGAGCCTGCATGGCATAGTGAGTCTGCAACTGTGAACT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGGAAATCCTGTACCTTCCCGTGCAGTCGCTCCCCAGCCATGCAGGTATTTCCAGAGCCTGGAGATCCCAGAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TACCTTTCAAAAGAATGAATTCCAGACCCAGAGAGTCCCCTGGAGGAGATTCATGGCAAGCAGCCGTACGAAAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AACAGAAGCCCCAGAGAGGGGAAGCAATTTCCTGCCTAAGTCGTCCATCTGTCAGTGGCAAAGCTAGGACTGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACTCAGGATTCTCCATCCCTCTTCCCAAACCTGGCACTATCTTCCTGGCTTTCTGGGTCTGGAGTCCCATGTTA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAGGCCCTCTGTTTTCAGAGCAGGACTCATTGAATATGTGTGCTCTTTCTACTCAAGTGCTTCAAGGATCCTTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTGGAAAAGCCTCGGTTCCGGACCAGTGCTGTCATGGCCTCACCATGTCATAGAATTCCCATCATTTCACTTGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GACTCCCTTCTTCCTAGGACCCGGGCATAAATTCTTGAAGAGTTGATCTGAGTGACAGACTCCCACGCTATGCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAAAACGGCCTCTTATTTCCCAATGATTGAGACCTTTTATTTGATCAATCTCATGTGCTCACTGGACCCCAGTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATACCTTCACATACCTGACACCTCAGGGAAACACAGCTTCCGTTCAAGTCAAGATCCTTGCTATACTGCAAACT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTTATGAAACGTCTAGGAGAATTTTCAGGCTCCTTTGTATATGGAAAAAGGTCAGAATGAAGCTCCAAATTCTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAGCATGTGTAAAAACTTAAGACAACCATATTTTATTTTTGTTTTATTTTTTATTTTTTTCATTGTTTTTTTTT 1036
Query 1 ---------------------------------ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCC 41
.|||||||||||.|||||.|||||.||||||.||||.||||
Sbjct 1037 TTGAGACAGCCTTGCTCTGTTGCCTAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCATTGCAACTTCCACCTCC 1110
Query 42 CAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAACTA 115
..|||||||||||||||.|||||||.||||||..|||||||||.|||||||||.||..||||.|..|.||.|||
Sbjct 1111 TGGGTTCAAGCGATTCTTGTGCCTCAGCCTCCCAAGTAGCTGGAATTACAGGCATGCACCACCATTCACAGCTA 1184
Query 116 ATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--- 186
||||||||||||||||.|||||.|||||||||||.|||||||||||||||||||||.||||||||||||.|
Sbjct 1185 ATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGACCTCCTGACCTCAGGTGA 1258
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1259 TCCAGTCGTCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCCCTGTGCCCAGCCAACAACTACATTTT 1332
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1333 AAAGCAACTTTATTCTCAACTGAATGACATTTTAATCACTTTCTTGCCCATGTGGATATGGATAAGGATATTTT 1406
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1407 GCCAATATTCTTGTTTGTGTTTGACTGTGATGCTATTGTTATACAAAGAATGGGCAGGTGGAGCTAAGCAGAAA 1480
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1481 GAGACAGTCGGGTACCTGTACCATGGAAAATGGAAGAGAGCCAAGCAGACTGCATCCTTAGGGGGCAGGGAGGT 1554
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1555 CAGTGCAAGTTGGGACAAAGCCTAGCTGAGTCGGTGAGCACTTCATGGCAGACTAGTCAAATTATATCTCTTGG 1628
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1629 ACTAAGATCTTCATTAAAGGCCTGCACCTCAGAGACATTTCAGCCTACCAAGGTGCATCATTATGGAAGACTGG 1702
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1703 GCATGATAATAGTAATTTAAATGAAGTTAAAAGAGCAGTCTAAATTAGAACAGGTATTCACATTCCAATTTCTC 1776
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1777 TTGAGAAGAGCCTCTGTTGGATAAAGAAAACTCGCTGAGCAAAATAAATCGATTGGAGGTAAACTTTACCAGCC 1850
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1851 CTGGAGTGCAAGGTTTAGAAACATGCACACATCCCACGGTGTTAAGGGTCCTGCTGTTTTCTTCCATGTCATTT 1924
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1925 CATCACAGAACAATTTTCTACAGCAACCTGATCTACCTTGTGGCCCAGTAAGGCATGTTTTGTTTTGAGATGGA 1998
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1999 GTCTCACTCTGTCGCCCAGGCTGTAGTGCAGTGGCGTGATCTCCGCTCACTGCAAGCACTGCCTCCCGGGTTCA 2072
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2073 CGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACCATGCCCGGCTAATTTTCTG 2146
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2147 TATTTTTATTAGAGACGGGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTCTGGGATCTGCCCG 2220
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2221 TTTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCTCCCAGCCAAGCATGTGAGAGTTTTAAATC 2294
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2295 AAATGTTACCTTGTCCCTATTAGCCTTACCACTGCTAAATATCTACACGGTTCCCTGTTAAGGAGAGTTTCTAA 2368
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2369 ATGACTCTCTTGAGAAATCCTGGATAAATGGAGAATGGAGCATTTTTCCTGCCTCTAAGCTTTGCTCCACTGCA 2442
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2443 ATCTTTCACATGCTGTGTATCCAGAGGGTGACTGCCAGATAGCTTCTTGAAGAAAGGGAGGAGGAAACGGTCAT 2516
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2517 TTTCTTGCTGCGCTTTCTAACACCCAACAGAGGAAATGCACAGCATAGGTGTGTGGGAGTTTGGCTGACTTATG 2590
Query 187 -------------------------- 186
Sbjct 2591 GTAAAAAATAAACATGGTTTCCTGTT 2616
