Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15487
- Subject:
- NR_122071.1
- Aligned Length:
- 2598
- Identities:
- 161
- Gaps:
- 2413
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGGCTCCGGTTGCCGAGCTGCTCCCAGGAGATTCGTTTTCAGAGGATCTGAGAAAAACCCGGCAGGGTTGATGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGCTCTTTCTTCTCGGTGCCCTCGCAGTGCAGCAGGCCCCGCTTATTTGCAAGAAGCAGCCAGGTCAGCCCAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGGCCTCCCCACCTCTTGTGCCCCTTCGCACATTTCAGAGCTCTCTCTTTTCCTCTGGGTCCTTCCATTCAAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGAGGAGGAGGAGGAGGGGGTGAGCCTGTTGCGAACGGCGTTGGTGGGGCAGGGGCCGGTTCCCCTGTTTCTGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGAGCCTTTTCTGTGCTGGTTGCAGGCAGGGGCCCTCAGTGTGGAGCTGTGGTGAGCCTGTGCCCCGTCGTATT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGGTCACAGCCTCCGTGACCCCTAGCCCCCGCCAGGCACTCCACCCCTGCAGTGATTCGCTTGATATTTTAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGCACTCCATCTTCTGCCTGCTGCCTTCTCTCCATTCATCTGGGTCCAGGTTTTCGCCGAGCCATCTAATAAAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AATCCAGGGGGGAGAATGATGGGGGCGAGGAGAGGGAAAGTGCTAACATTTATTAAGTGCCCGCTGGGTGCCCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCACTTCCTCAACAACTAGAGCAGCGGTCTTTCTGCTTTCTTTCAGCTGCATAACCCTTTCCTCCATCCAAAAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CGCAAGCCTAACCTGGCCGTGTAAACAAACACCAGGGAAGCGCCTCTGATGGAAGGGGATGGGGCACCTAAGGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCTGTCTCTCACCATGTAGCATCCTCCCCACTCCTAACAGACACTTTGGTGCTTCCATGAAACCTGGATCTAAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGCTCTGTGCTCATTAAATCTACATATAACTCTCCAAGGAAATAGTATCCCCATTTTTATAATACCAAGCTAAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGCCAGAGAGGGAGAGTGTAGGATCACACAATTTTTTTTTTTTTTTGAGATGGCGTTTCACTGTCACCCAGGCT 962
Query 1 ---ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCT 71
.||||.|||||..|||||||||||||||||||||||.|||||.|.||||||.|||||||.||||||.||||
Sbjct 963 ATAGTGCAATGGCGTGATCTCAGCTCACTGCAACCTCCACCTCCCTGATTCAAGTGATTCTCCTGCCTCAGCCT 1036
Query 72 CCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTT 145
.|||||||||||||||||.|||||.|.|||||.||.|.||.|||||||||||| |||||..|||||||||||||
Sbjct 1037 TCTGAGTAGCTGGGATTATAGGCGCGCGCCACCACGCCCAGCTAATTTTTGTA-TTTTAATAGAGACGGGGTTT 1109
Query 146 CACCCTGTTGGCCAGGCTGGTCT-CGAACTCCTGACCTCAAG-------------------------------- 186
||||.|.|||||||||||||||| |||.||||||||||||.|
Sbjct 1110 CACCATATTGGCCAGGCTGGTCTCCGAGCTCCTGACCTCAGGTGATCCGCCTGCTTTGGCCTCTCAAAGTGCTG 1183
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1184 GGATTATAGGCGTGAGCCACCGCGTCCGGCCCAGGGACACGATTATTAAAGGGCAGAGAGCCAGACTGGGGAGG 1257
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1258 CAGGTGTGCTCCATTCCCAAGCCCATGCTTGCCCTGGCTCTGCCGGGAAGACAGTAGGTGCTTTGCTTCCTGAG 1331
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1332 AAAGGTCAGGAAGAGGCGTGGCTCCTCCAGCTGTACAGACGACCAGGCCAGATCCACATGGCCCCGTTTGGTGC 1405
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1406 TTGGATGTCTGGTAAACTGCCTGCCAAGGAGGAACGCAGAGGTGAAGCACCTGGTCCGACCCATCATTTCACGC 1479
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1480 TGAATCGCCTGTTGACCCATCTCACTTGACTGACTCCTGGGATGGAGGCCTGGCTCCCTCCAAGGCAGCCCCTT 1553
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1554 GCGTTGGAAGAAAGGCAATGGTGTGAAGCCTGTCTGGTTGTACCCTCCAGCTGCGGGTCCTTACTCCAGCTCTC 1627
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1628 AGAACCAGAAGGAATCTGTCTAATTGCTCATCTACTGGAGAGCCCTTGAGAGGGGCTTCTTCAAGGTCCTGGGA 1701
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1702 ACTCCAGAATGTTCCCCTCCACTTAAAAAACACAAGGATGGTCTCCAGGCACCTGAGGAAACACAGTCTCCTGC 1775
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1776 CCTTTAGGATCAGCCACCTCTGAGGCCAAGACCTGACCCAGATTCCGGTACCCTTCACAGAAGGAGCCACCACA 1849
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1850 GTGGAGAAGGAAGCTCATGGCTTTTGGGCAAGAGCCTCTTTGAAAAGGAGGAAGAGCTCGCAAAGGGTGACGGC 1923
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1924 AGAGAGATGCCCAGAATCTTGCAGGAGGAAGGAGAATGCAGCCTAACTTGCTGGAAGGATTCAGGAGACGTGTG 1997
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1998 AGTAAGAGCCAAGATTTCCCAGATCAGCCTACAGCCAAGATAAGCACAGCTTTCTACCCAACCTGCACCTCACC 2071
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2072 ACAGAGAATGGAAGAATCACTCAGCCATCCTGTATATTGTAGCAATAATGTATGGTTATTTTTTCTAGGCACTG 2145
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2146 AGTTTTGGGATGATTTGTTATGCAGCAACAGCTGGCTGCTACAGAGATTGTGCCCACCCTCACAGCCCCCTGGA 2219
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2220 TCTGTGTGCTCGCACTGAGTTTTGGGATGATTTGTTATGCAGCAACAGCTGGCTGCTACAGAGATTGTGCCCAC 2293
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2294 CCTCACAGCCCCCTGGATCTGTGTGCTCTCACTGAAAAGCAAAAGTAACTTCTGTTTTTCTCTTCTCTGTGGCC 2367
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2368 ACCAGGGCTGCTGCCCAAACAGAAAGGCAATTTGCTTAGTGGTGGAGGTTGTGACCTCCAGAGTCAGACAGTCC 2441
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2442 TGGAATCCTATCCCAGCTGTGTGACCTGCAGTTGGCTTCTTAACCACTCTGTGCCTCAGTGTCTCCATCTACAA 2515
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2516 AAGGCACAGTTTCTACCCCATCAGGTTGTGGTAAGGACTAGAAAAGACATTGGAAGTAAAGTGCATGACACCAA 2589
Query 187 -------- 186
Sbjct 2590 AGTGCTCC 2597
