Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15487
- Subject:
- NR_136511.2
- Aligned Length:
- 3176
- Identities:
- 160
- Gaps:
- 2990
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTTTTGATGGGTTCCGGGTCCCAAAAGGGTTCGAGGCCTCTTGCCTTCGCTCCGTAGGAGGGAGTTCTCTTCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCCTGGGGGCCGCAGGACTGTCCAGGAATACAGTTTCCAGGTGAGATCTTACTTGAAACACCGGTAGTTCTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCACAGCTAAAATGGCATCTACTTGGGCTATCCAGGCCCACATGGACCAGGATGAACCTTTGGAAGTAAAGATA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGGAAGAGAAATATACCACCAGACAGGATTGGGACCTGCGTAAAAACAACACCCATAGCAGAGAGGTCTTCCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCAGTACTTCAGACAGTTCTGCTACCAGGAGACATCTGGTCCCCGTGAGGCTTTGAGCCGACTCCGAGAACTTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCCATCAGTGGCTGAGGCCAGAGACCCACACCAAAGAACAGATTCTGGAGCTGCTGGTGCTGGAGCAGTTCCTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCATCCTACCTGAGGAGCTCCAGGCCTGGGTGCAGGAGCAGCATCCAGAGAGTGGGGAGGAGGTGGTGACTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCTGGAGGATTTAGAGAGAGAACTGGATGAACCAGGAGAGCAGGTCTCAGTCCACACTGGGGAACAGGAAATGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTTGCAGGAGACGGTACGTCTACGAAAAGAAGGAGAACCCAGTATGTCCCTCCAGTCCATGAAAGCCCAGCCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAGTATGAATCTCCAGAACTTGAATCCCAACAGGAGCAAGGAAGAAGACCAGCTACAAGGAAATACTTCTGAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AATCACTCTGAACCCCAAGCTGGAGTGAATCTTCTCCTGAGCTCTCTCATTCCAGAATGGCAATCTTGTTTCAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAGAGATCTCTAATAGTGACTGATGGTAAAGGAAGAAGGCTGTGCCTAGAACAAAGAATCAGGCTGGCAAAGAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATCACAGGTCTTTCCTCAAACTTTAAATTGCTACTCTCTGGAGATAGCTACCTGGACTTTACAGAGCTGTCAGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGACTTGGGAAGGTTTGCCAGCATTGGAAAAAGCCACTTGGACTTCACAGAGCTGTCAGAAGACTTAGGAAGCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTGCCAGTAGTTCCTGAGACCAGAAATACATATTATGAAGCAGGTGCTGGAACAGGCCCTGGCCCCTACTTGTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAGCTGCAGATATAGATGGTGTTACTGAGAAGGAAACTAAGGACTTGGCTCCAAAACAAAACAAAACAAAATCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGAGATGCTGAATTTTGTTGGGGGGAATGTCTGTAGAACTGCAACATCAATGCAGTAAGTGTAGTAAAAGCTTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGTTTATGGTGAGTCATTACTCAGCATCATGGAGTCCACGATGAAGAGAATCTCTTTTCAATCTGTGCAATCAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAAGTTTTTGAAAGGCTTTTGTTTATAGTGGAACCCTCTTTTCCCCCTAGAAGAACCACCACAAGGAAAAATGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGTCACCATAAGGAATGTGGGAAAGTTTTCAGCCACATGGCCTTATTTGACTTCAAAGAATCCACATGAGAGAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGACTGCATAAATGTAATAACTGAGGAGGCCTTTGTTCAGCAAAGAAACCTTATACAAACTCGTATAAAGAATG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TAGGAAGACCTTCACCCAGAAGCCAGGACTGACTGTGCACCAGAGAATCTGCACAATAAACATGATGAATGTGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGATGCTTGCTTCAGCATTGGAGAATTCACAGTAAAGGGAAACCCTGCCAGTGTGATGAGTACGGAAAAGTCTT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CAGAGGTTGGAACTTGGGAAAAATCAGTGAGTGAATTCATATTAGAGAGGCTCTTATAAATGAGAGGATTGTGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AAACTTGTATAGACAGAGATCAGACCTCAACAAGGGAGCCTCCACAGTATTGAAAAGTTAATATAATTAATGTA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGTGGGCAAGTTGTATGGGGAATGGGTAGTCTAAATTGCTCATTTTAGCCAGTAAAAACATTAAATTAGTTTCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TAGATCAAGAAAAGGAAATGTTAGAAGTTATTTTTCCCTTCCAGAGGGGTCTATATGTGTAAGCAACCAGGACT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTTGAAATAAGTTGCATCTCTGGATTTGTGATCTGTCTCCTGGATGATTATCTCTGTTTTGGGAGACAGGTATT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTTTCTTCATGCCTGCTCTAGTCTCATCTCATATCTTTAATTCATTCAGCAAGTATACACAATAGTATTATCGT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CTACTGTTTGTTGTAAATATATATATATTATTTTCTTTTTGGTCTGAGTAGGCTTGTATTGGTACCCTAGGACA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TAAAAATCACATATATCATGTTTCAGTAAATGCAGTGAAAGGAACTATATTATTAAATTGCTGGGAATTTCTGT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AAATTTGAGACTACCTTTATATTCTCCAACACAAGACCGTGTAGGTGTCCCTTCAGAGAGTATATTTTTCTAGC 2368
Query 1 --------------------------------------------------------------ATGCAGTGGCGC 12
.||||.||||.|
Sbjct 2369 TTGGCTTCTTTATTTTCTTTATTTTTTTGAGATGGAGTCTTGCTCCTGTCGCCCAGGCTGGAGTGCAATGGCAC 2442
Query 13 CATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGA 86
.|||||.||||||||||||||||..||||||||||||||.|||||||.||.|||.|.||||.||||||||||||
Sbjct 2443 GATCTCGGCTCACTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGTCTCAGTCTCCCGAGTAGCTGGGA 2516
Query 87 TTACAGGCGTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAG 160
||||||||...||||||.|..|.||.|||||||||||||||||||.|||||||||||||||||.||||||||||
Sbjct 2517 TTACAGGCACTTGCCACCATTCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAG 2590
Query 161 GCTGGTCTCGAACTCCTGACCTCAAG------------------------------------------------ 186
||||||||||||||||||||||...|
Sbjct 2591 GCTGGTCTCGAACTCCTGACCTTGTGATCTGCCCACCTTGGCCTCCCAAAGTTCAGGGATTACAGGCATGAGCC 2664
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2665 ACCATGCCCGGCTGTTTTTTTAAGATAGAAAAATATACTTCATGTATAGCCTATTGACAGATAATGACTGATAT 2738
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2739 TTTTTCTTATAGATAACACATAATAAACATTGTGAAGACTAATAAGTAACTTGCTTATTCTTTTCAGTTCTAAA 2812
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2813 ACCTGTAGGAAAGAATCTTTAGAAGCTGTCAACAAGTTGATAATGTAGCCCAATCTCTACCCATGATAGGAGAG 2886
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2887 TAAGGCTTATATATTTTATAGTAGGGCACTAAATACAGGAACCATGTATTTAAAAACTTTTTAGTGATTATCTC 2960
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2961 AGAATTCTAGGTGTCCCTCTGCTGTACATCCCTAAATTTTTTGCATAGGTATTATTAATAAATTCATTATTTTC 3034
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3035 AAAGATGGACTGTGTTCTGTAAAAAGCTTTTCCAGTATCTGCAAATCACACAGTTTTTTTTAACTCTATTACTA 3108
Query 187 -------------------------------------------------------------------- 186
Sbjct 3109 TTATATAAAATGATTTCTTAATATTGAACCAACCTTGCATTCCTAGAATAAACCTCACTTAGCCATGA 3176
