Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15487
- Subject:
- NR_146853.2
- Aligned Length:
- 2381
- Identities:
- 161
- Gaps:
- 2196
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTCTTCAGCTTTCACCGGCTGGGAGTCCGGAGCTGCAGCAGAGGCCACACCCAGGGCTTGGTGGTCCCGCGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCCGGAGCTCAGCAGGCGCTTGCTGCTTGAACCGGTCAAAGAAGGAACGAATGAATGACCCTTTTGCCAGGAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGAGACCCGGGGGCCTCAGGGAGCTGCGAATCCCATGGACTCCTCCCGCAGCCTGGGGGACCTCGGGCCTTTTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGCGGGAGGTAGGGCGCGGGGCTCCGCTAGCTCCGGGCGCCCGGAATCCCGCGACGGCAGGGGCGAGCCGAAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAGGGCGGCGGCCACGAGGACAGAACGGCAGATCGGGCCCTCGGACCTCGGGCCGGGGAGGAATTGGACCGTGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTCCTGGGTCAGAGAGAAAGTGCTCTTTCTCCTGCACCCAGAGAGGTGGTTAGGGACTCGAGGGGACCCTGCAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGGAAGAGGTGGCCGGTGCAGAGGACCTTCCTCATGCGGGTGGAGAGGACCACGGCGAGGAGCCCAACTACCCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCTGTCTTTCAACGACAAAAGCGAATTTCTGGCAGGCGTGTAGCCCCGCCGCGGGACGCAGCAGACCCACCCAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATACGTGCTTGTGCGGGTGGAGGATTATCAGGTAACACAAGAAGTGTTGCAGACCTCCTGGGCCAAGGGTCGCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGACCACGAGGACTGAGGAGCACTTCGTGACCGCGCTCACTTTTCGCAGCAGTAGAGAGGGACAGCCTGGGGAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CGCTGGGGCCCTGCTGAATCCCGGGCTCTCCAGGCACGAACAGGGGCATCCCGCGTCCACGCCGCGGGGAGGAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGTTTCACCGTCTCCAGGGACTTGGCTCGAGGAAATTAAACTCTAATGAGTAGCTCGAGAAATGTTCCGGGATG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTGGATGAGCGATCATCCTTAAAAGAAAATGCTATTCTGGGAGCTCCAACCTGCAATTAACCTACAGAAGGAAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTTTTGAGAGGCTGGTGCAGCGCTTCGGGGAGGCAGATTAAGAACTGACCTAGAAACAGAAGTGAAGTTTGAAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCTGCTCTCTGCAAAGAGGGTGGGAGTGGGTGGAGAAGAGGCTTGTTTTAAAAGCCAAAAACAGAAAGTAAAAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GAAATGGGAAAGTAAAACCAAAGCAGCAAGTGACTCTCTTCTGATGTGCACTTTTCATTTTTCTCCCCCACATT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCAGTGTTAGAAAGAAAACGAGAGGAGCTAGGGAAAGAAGGAGTTGGGGACAGAAGACTAAGATTTCAACGTGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AATTCCATTTACAAAGGCTTTACTGCAAACAATAGCTAATTTAGTCCTGTAAACATGCATTTATCATACATTTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AATTTTAATATTAAAAATACTGCATGTAAATGTTCTGAACTAAAGGTAGATAGCAATATGTAGTTTGCCATAAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATGAATGCATGTCTTATTCTTTTCCATAGTTCTTCATTAATGAGACTTGTAGTCAAGAATAGATTGAAGATACC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATTCTCCTTGTGTAGTTCAAAAAAATCTCCTCTGGTAATACTGAAACAACTAATTTTTCTTATTTTGTTTGTTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTCTTTATTATTAAATACTATGTGAATTAACTCTTTAGTAGTTGGCCTGGTTGAAGCTCTGTGAGGAGCAAAGC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGCCCTCTCCAGGTGAACTGCTTGACTTTACCACCTGAAGGAGTATTTACTGCAAGAATTAACAAAGCAGGTGT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TCCTGATCCAAGCAGAACCCTGTTATTTGAAGAGCCTGAGAAATCTTATCCCGTTTACAAATGTCCTGGGAGTG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CATCCAAAGTGAAACTTGGGCATCCTCAATACTAAGAAATCTCTGAGAATGACTGGATCTTGGCTCTTTGATCT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TACCTCTACTCCTCTGAAAAACATGATTATCTAAAATTGTGTTAGGTGGATGAACCGCATCAAAGACTTCCAGA 1924
Query 1 -------------------------------------------------------------------------A 1
.
Sbjct 1925 AGCCACTCCAGTGACCATAAGATAAATGTCAGAATCGCATAACCCCCAGGATCAGCCTGTTGCTCAGGCTGGAG 1998
Query 2 TGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCAT--CTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCC 73
||||.||||.|.||||.||||||||||||||.|| | |||||.|||||||||.||||||.||||||.||||||
Sbjct 1999 TGCAATGGCACGATCTGAGCTCACTGCAACCACC-TGCCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCC 2071
Query 74 TGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCA 147
||||||||||||||||||||||..|||.||.||||.||.||||||||||||.||||||.|||||.|||||||..
Sbjct 2072 TGAGTAGCTGGGATTACAGGCGCCTGCAACCACACCCAGCTAATTTTTGTACTTTTAGTAGAGATGGGGTTTTG 2145
Query 148 CCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG----------------------------------- 186
||.|||||||||||||||||||||||||.||||||||.|
Sbjct 2146 CCATGTTGGCCAGGCTGGTCTCGAACTCTTGACCTCAGGTGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGGA 2219
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2220 TTACAGGCTTGAGCCACCGAGCCTGGCCTCTACTTTTTATTACTGTCATGTAGTTAGTGATAAAATGCTTCTAT 2293
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2294 CTGAAAAAAAATTTGTTGTTCTAAATTCTAAAAAATTCTCGTGATTATTGCTTAAATTTTAATAAAGCAGATGT 2367
Query 187 ------------- 186
Sbjct 2368 GATTTTCAAATTA 2380