Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15487
- Subject:
- NR_152414.2
- Aligned Length:
- 2233
- Identities:
- 152
- Gaps:
- 2062
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTTCCACCGCCTCCATCGCCGGTTGTGTTCGCAAGAGGCGACCTCAGTTTCCCAGGTGGCGCTGCGGCAGCCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTCCAAAGTCGGACTTTCAAAACCAACCCGAAGTTTTGAACCCGGCGGCGGCAGTTGTCACTGGCACAGGTTTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGTGGTGGCGCCAGTGTACTACTTCTGGGGAGGTCTCAACCAGGTTCTGGCACCTTCAATCCCCACCTGATAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGCGTATCATCACGGTATCCCGCTTTTCCCCCAGTTCCCCAAGAGCGTCCTTCCTTTCCCTAGTCACAGGATC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCAGTTTTGGTCTGATAGTGCATCCACCTACCCCAGTGTTGCATCCCCACTTCCCTCTTTCCATCTAACGTGGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGCCTTTCCTGGGGATACCTTGGGTATCCCCCGCTAGGAGAGCAAGCACAAGACACCAGGGAGCCAGACCCCTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCGCTCCCCTGCCACAGGATATGAATACGAGCCTCAGCTGGTTTGAGCAGCTGGATGTGCTTCTCAACGCTACT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GATGGAAATGTGGTCCGGAATAAGCAGTGGCTGTATCCTCTTGGGGTCTCCACAGAGCTCATTGGCCTGTGCAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTGTTTCTTCTGTAGCAGTGGCTGTATCTTCTTGGGGTCTCCACCGCAGAATAGCACTGCTGTCACTCCTGCAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGCTGTGGGAGGAGTCAGAGATTATGCAGAAGGAATTGAAGTTGCTGCAGTACCAGCCAGCACCAGGAGCTGCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCTGAAACAGCTGGCTGAGGGACGACAGGCTCAGGTTGGCAGTTGGAAGGATCTCCATTCATGTTGTCCAATCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAGCTGCCTCTGCCCACTACCTTCACCATGTCTGTTTCTTCATCCAGCTCTTAATTCAGTCTTCTGGACAGTAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CAGTAGCTGGGAACTTTTATGGAAGCCAGATCCCCAGAGGAGCACCCTTTCTAACCTGGAGCCCAGCATCTTTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGCTCCATGCCCAGAGTCTTAAGCAAGAGGACCTATTCCTTTGGGGCCCCAAAATGCTCCTGAATGACCTGTAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGACTCGTTAAGAATAGTAGGATGAAGGCTTCTTTGCCCACCCTCCCCTCCAAGGCCCTGTTTCTGGGCTGCCC 1110
Query 1 ---------------------------------------------------------------ATGCAGTGG-- 9
||.| |.|
Sbjct 1111 GCCCCTACCTTCTTGAAGTAGCTATTATCTGTCTTATCTACTGAGGCTTTTCACTGCCTGCCCATCC--TTGCC 1182
Query 10 CGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTG 83
|.||||||||||||||||||||||||..|||||||||||||||.|||.||.||||||.||||||..||||||||
Sbjct 1183 CCCCATCTCAGCTCACTGCAACCTCCGCCTCCCAGGTTCAAGCAATTGTCCTGCCTCAGCCTCCCAAGTAGCTG 1256
Query 84 GGATTACAGGCGTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGC 157
||||||||||.|||.| |||||||||||||||||||.|||||.|||||||||||.|||||||
Sbjct 1257 GGATTACAGGTGTGCG-------------CTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGC 1317
Query 158 CAGGCTGGTCTCGAACTCCTGACCTCAAG--------------------------------------------- 186
|||.|||||||.|||||.|||||||||||
Sbjct 1318 CAGTCTGGTCTTGAACTTCTGACCTCAAGTGATCTGCCCGCCTCGCCCTCCCAAAGTGCTGGGATTACAGTTGT 1391
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1392 GAGCCACCATGCCCAGCCTATAGCTGTACCTTCTGAGTGCAAGCTCAGTTGAACTTGGAAAGTAATGGGAGTTC 1465
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1466 CCATTCTGGTGAGTAGAATGAGGTAGGACACTGCTCTAGGGCAGTAGTGCTGGGGGATGCAAAGGAGGATGAGA 1539
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1540 TATTCTGGTGGGACTTGGATCTGGACAGTAGGAGGCTACCTTTCCTCATCTCCAGCTTCTGCCTTTTTTTTTTT 1613
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1614 TTTTTTTGAGGCAAGGTCTTACTCAGTTGCCCAGGCTGGAGTGCAGTGGCATGATCTTGGCTCACTGCAGCCTC 1687
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1688 CGCTTCCTGTACTAAAGCAATCCTCCCACCTTAGCCCCCCAAGTAATAATATATGGGACTACAGGCACACGCTA 1761
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1762 TCATGCCTGGCTAATTTTTAAATATTTTTTGTAGAGACAGGTTTTCACCATGTTGCCCAGGCTGGTCTCGAACT 1835
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1836 CCTGGGCTCAACTGATCCACCAACTTTGGCCTCCCAAAGTGTTCAGATTACAGGTGTGAGCTGCTACCATGCCT 1909
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1910 AGCCCCAGCTTCTACTGCTTGAGGCTCTCTTTGGCATCTCCACACATCATCCTTAGCAGCCCAGACTGCATTTC 1983
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1984 TGTAGCAGCCTCTTCCCTGGTCTCTTCTTTCAGTCTCTCTGCCTCTAATCCAGTGGCTTTAAGAATTTTTTGGC 2057
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2058 TGTGACTTCCAGTAAGAAATACAATTTACATTGTGACCTAGTAAATATGTGTGTAGATTTATTAACTGAAATAA 2131
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2132 AAATGTTATGATTTAATTTTTATCCTTAGTGGGAGTGATACACTGATATTTTCTATTATATTTCATTAAAAAAT 2205
Query 187 ------------- 186
Sbjct 2206 GCCTTGTGACTAA 2218
