Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_15487
Subject:
XR_001750808.2
Aligned Length:
2214
Identities:
161
Gaps:
2028

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TGAAATTTCAACCTGCCCAACACGATTACTGGTCCACCTAGAAATGCCGTGGAGCGATTTAAGAGCCTCGGAAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTTCCTTTAAGGTCAGGAGAGAAGCTGGTAACAGATGGGGCGAAGGAGGAAAAGTTCTTTTTGCGGCACCCTCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CGCCTTCCCAGCCCTTTCGCGGTTTACTCGCTCCCCGGAAAGCAGAAATGAAAAGAGGCTTGCTCATGACTTGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AAGCGGTGGGCTGAGGCCTCCCAAGACCATCTGGCTTGTTCCATTGCCAGCCAGAGTGGAGGCGACATTCACAC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GAACCCAGGAGCTGCAGGGGCGCGTGAGCTACAGCTGCCTTGTGGCATCCAAGGAGTGCGCAGTGAGATTCCGC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AGGAGAAATCACGCTTTGCATGTTCTTGAGTACAAGAAACATGTGTAATGAGGGTTTTTGTTTGCGGGCATGCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AAGGAGAACGACTGGAATATTAAAGTCATCACAGCCTTTATTTAAGGGAGAAGAGGACAAGCATGAATATGCTG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ATAGTTCAGAGATATTTAGGACCTTCAGCAGCTCAGCACTCATCCTAGATTTATACAAATACCTTTCCAGAGAT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GAAGTTTTTAAAAGCCTTTTAAAGGAATTTTATTTGTTCTTTTCACGTGGGGAAAAGTGATGAGTATATCTATG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CAAGTATGAGAAATGGCCAAGGCCACTCCATGTAATTTTTTACTTATCCTATAGCTACACAAAGAAAATAGCAC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CAAGTGTTGTAGAGGAAAATCTACTAGACTTCAAGCCCGGCTTGAATTCAATTCTGTGCTCTAATTCAGACTCT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ATCTTTACTTAGCTGAGTCATATAAATTATTTAATTTTCTAGACTTCTCACTTCTCTTTCTTTCTTTTTTTTTT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AGACTAGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTCAGCTTACTTCAGCCTCCGCCTCCCG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GTTTCAAGTGAATTCTCCAGCCTCAACTTCACAAGTAGCTGGGATTACAGGGCATTCAAGCAGCCCTGAGGAGA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GGTCCACATGGTGAGCCACTGAGGGCCTTGCCAAGAGCCAGCACCAACGGTCCAGGTTTGGAGTGTACCACCTT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GGAAGTGAATCTTCCAGTCCAGTCAAGCCTTCAGATGACTTCAGAACCGTCCATGTAAGCCACTCTTGGATTCC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TGACCCACAGAAACTGTTGGAGGCATTATCAACAGTTTCTAACATCACAGACAGACAAACATGTGCCTCCTGAT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TGAAAAAACAGAACATCACCTGTAGTCTTGCCAGTGAGATCAAACTGAAGTCCAATTAACCTCTGGATCCAGCT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GCCAATTTGCAGGAAATAGAGGAGAGAAGCATCTGTTGAACTGCACCATGAGTATACACTCAGCAAAGGCCAAA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CTGTGGAAAATGATACAGGTCAAACAGCCTGGATTCTTTAACAGACGGAGTCTCACTCTGTCACCCAGCCTGAA  1480

Query    1  ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCT  74
            .||||.|||..|.||||||||||||||||||||||..|||||.||.||||||.||||||.||||||.|||||||
Sbjct 1481  GTGCAATGGTACAATCTCAGCTCACTGCAACCTCCGCCTCCCGGGCTCAAGCAATTCTCCTGCCTCAGCCTCCT  1554

Query   75  GAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCAC  148
            ||.|||||||||||||||||..|.|||||.||.|.||.|||||||||||||||||||.||||||||||||||||
Sbjct 1555  GAATAGCTGGGATTACAGGCACGCGCCACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCAC  1628

Query  149  CCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------------------------------  186
            |.|||||.||||||||||||.|||||||||||||||.|                                    
Sbjct 1629  CATGTTGCCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCACCCACCTCAGCCTCCCAAAGTGCTGGGAT  1702

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1703  TACAGGCATGAGCCACCGTGCCTGGCCTTTTGTATCTGTTTTATTTTTTAAATAATAAGATTAAAAATAAATAT  1776

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1777  TCTGCATGATTAAACAAATACAGATTTAAATTTTTACAGTCCAATTGAGTGATTTCCTCATGTTCCAAAACCAG  1850

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1851  GAAGTAGGTGTGGGACATCTATCTCCGTATTGCATACACAGTCTGGATTCTAGTTGTAGACTCCATATGGGCTG  1924

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1925  TCATACACGCTACTACAGAAATGAGAGAAATCCTTGGGAAATGGAACCATCTCACACATGAGAGACATCTCTGA  1998

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1999  CAACTTATTCATAACTGAATACTTCTCATTTATCTTTACCAGTAAGTGATGTTTCTGAAGCACCAATGAAAATG  2072

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2073  AAGTCCTGAAGTCCTGTGCTCAATATGAAATGTTGGAAGTTAGAAGAAAAAAACAAAACTTGGATCCAATCTCA  2146

Query  187  --------------------------------------------------------------------  186
                                                                                
Sbjct 2147  AGGCACTTTTTGTTTAATGGGAAGAAGTGGATTATTTTAAAAGCTACAAATAAAGTTACATAAAAGTA  2214