Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15487
- Subject:
- XR_001752916.2
- Aligned Length:
- 4768
- Identities:
- 160
- Gaps:
- 4582
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTAAAAATAATAAATGAATAAAATAAATATATAAATAAAAATTTGACCGACAGCTTAGTAAGGATTATATAGTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATGTCTGCTACTGTTTAAAAAGGCTTTTCTTTTTTTTTTTTCTTTGACATAGAGTCTTACTCTGTTGCCCAGAC 148
Query 1 ----ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCC 70
.|||||||||.|.||||..|||||||||||||||||.||||..|||||||||.||||||.||||||.|||
Sbjct 149 TAGAGTGCAGTGGCACGATCTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCAATTCTCATGCCTCAGCC 222
Query 71 TCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTT 144
|||..|||||||||||||||||..|||||||||.||||....|||||||||.|||||||||.|||||.||||||
Sbjct 223 TCCCAAGTAGCTGGGATTACAGATGTGTGCCACCACACATGGCTAATTTTTTTATTTTTAGTAGAGATGGGGTT 296
Query 145 TCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-------------------------------- 186
|||||.||||||||||||||||||||||||||||..||||||
Sbjct 297 TCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGGGCTCAAGTGATCTGACTGCCTCAGCCTCCCAAAGTGGTG 370
Query 187 -------------------------------------------------------------------------- 186
Sbjct 371 CTATTACAGGTGTGAGCCACCTCGCCTGACCTAAAAACACTTTTCAGCTCCAATTTTAAACTTAAAATTTTTCT 444
Query 187 -------------------------------------------------------------------------- 186
Sbjct 445 TATTTTAAAAACAACATATGCATGTATTATCAAATACAGGAAAATATGAAGAGACAGAAGTACTTACTGATCAT 518
Query 187 -------------------------------------------------------------------------- 186
Sbjct 519 AATCCTACCACCAGAGACATCACTATGAATATGTTTGTACATTTTTTTCCTGTGCATTCTAAAACATAGTTAAG 592
Query 187 -------------------------------------------------------------------------- 186
Sbjct 593 ATTATGCTAAATATACAGTTCTCATGCTCTTTTATGTCAGAAGTGTTTTCCCATGACATTTTAAACCCCATAGA 666
Query 187 -------------------------------------------------------------------------- 186
Sbjct 667 CATAATTTTCTAATGGCTACATACTATTCTATCTAACCATTTCCAGAGGTTGGATATTTATCCAGCTTCTGAGA 740
Query 187 -------------------------------------------------------------------------- 186
Sbjct 741 CTTCCTGTTATAAAACAACACTTTGATGAACATCTTGGTACATAAATCTTTTGCATGTGACTACTTCCTTAGGA 814
Query 187 -------------------------------------------------------------------------- 186
Sbjct 815 CAGATTCCTAGAAGTGAAATTCTGGGTCAAAGAGTAGTAATATTTTAAAGGCTGTTTATGCATACTGACAAGCT 888
Query 187 -------------------------------------------------------------------------- 186
Sbjct 889 GCTTCCTGGCAATTTGTCCAAACTTTTACTCTGACTAGCATTGTATGGGAGCTTCCCTGAGTGAATGCTGCCTT 962
Query 187 -------------------------------------------------------------------------- 186
Sbjct 963 TGAAGTGGGGTCAGAGACTGAGGACCAAGGGGCACAGAGAAAGAAGAGTGTGGTCCTCGATGGGAGGACCCATC 1036
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1037 ACAAACCGTCTTGCACAGTGTAAACCCTGGAGAGGGGCTGAAGAAACCACTGCAGCCCGGGGCCGCCCATTCTA 1110
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1111 CCTGGCCCATGGTAGGCACTCAAGAAATGGTTTGCTACGTGAATAAACAAATCCACAAACATATATTTCTGAAT 1184
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1185 TCCTATCATGCGTCAAACACAAGAGATAGGGAGAGAGGAGGAAAAGAAAAGCAAGGGATCATGGGATAAAAGGG 1258
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1259 GACAGTGGCAGTGGGGTGGACAGAAGTCAGAACTAAATTTACCTCATGCTTTAATTCGGCGAGTTTTCTTAGAA 1332
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1333 TAGTCTGACCATTGCTTACGTTGAGGGTCTATAGTCCTCCCTTCCCCACAAGACAAAGTCCAACCTAATTCAGC 1406
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1407 ACCAAGATCCAAGCAGCTTGGAAGATACAGGAGGGAAAATTCTGGTGTAGATTAAGTGCCACCCCCCAGCAATG 1480
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1481 GCCAGGACACAGCAGCAATGTTACCTAAGAAAGCAACTGCGCCTCTTGCTGATCAGCTAGACATGAGGGCAGTG 1554
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1555 TCCTACCTCAGCGGTTTGCAGCGGACATGCTGTCAGGCCATTGGGATAGTTCCCATAAGCCACTCCTGGTTGTC 1628
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1629 ACCACTATTCCAAGTGGGCAGGAGCAGCCTTATTGACTGAGATGGGCGGCTATGGACACACATGGGTGTACGCA 1702
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1703 TGTGATGGAAATGGGGGCTTGGGGCCCTGAGGGTCCACAGGGGCTGCGTGGTCAGGGAGGGTGGGCATGGCATC 1776
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1777 ACAGGCACCCCAGGGGAGAAGCTGGCTTTCTTCCCATACTTTTGGCACTGTTTTCTGTTTTGTTTGCCTTCAAA 1850
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1851 GAGCAAGTGATGGCTGGACAGCAAAGAGGAGTGGAGGCCGGGAGAATGGGCAGCTAGCCCAGCGCTCTCCAATA 1924
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1925 TCTGGGAGTCGACCGCACTCCTGCACTCCCTGTCATCCCTGCTAATGGTGAGGAACTGAGCAAAAGAGCCTCCA 1998
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1999 GAGTGACAGGTGACTTAAAGCGCACGTGGCTCTACATTTACAATTGAAGTGGGCTTTGGAGATTGCAGATTCTG 2072
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2073 AATACCTGCTGGGGTGGTACAGAGGCTGTGTTCTGGTTTTGCCATCTTGGACAGGGGGTTGGGAGTCTGGGGGG 2146
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2147 CTGCCTTCTCTCCTCTTCGTGCAGCTCTGCTGGGGCCTGTCTCACACTTGTGAGCAGAGTTATGGCTGGATTCC 2220
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2221 AGGGGAGACAGAGCTTGGTTGTGAAATGTAAGGTTGTGAAATGAAGGGCTTGTGAAATGAACAAAGAATGTATT 2294
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2295 TAAGGGTCTTTCATTTTAAATCGAACACTTACATAGCACTTACTACTTGCAAAGCTCCACTCTAAGCACTTTAC 2368
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2369 CCATCTTAATTCATTTAATTCTCTTCTCAACCCTAAAAAGCAGGTATTACCATTGCTCCAATCTTACAGATGAG 2442
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2443 GAAACTCAGGCATGGAGAGGTTGAGCGACTTGCCCAAATTCATGCAGTTAGGACCTGGCAGAGCTGCGCTTTGA 2516
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2517 ACCCAGGCTGCCTGGCTCTAGAGTGTGTGCACGAAACTTCACTGCCATATGAACAAAACTGCAGGACATATGTT 2590
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2591 CTCAAAGCAAATAAGCCTCCCAGAGAGGCTTTTCCTGATGGCTTCAAGGACCTGCCCTAGCCTGGTCTGACTTC 2664
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2665 CCAGAGGGGATCCAGTCCCAACATTGGCCCTATCTTTAGACCACATTTCCATCCCATTCTCAGTGAAAACCCTG 2738
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2739 AGTCATGACAGAAGACAACCAATGCTGGAGAGAGGAGGTTTCAGGAGGACAACAGTCAGAATACCCCCAAGACG 2812
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2813 TCCTTCTTTCCCTAAGGTCTCAAAATCCTTGCCTCAAGAAGTTATTCCTGAAGTCTAGCTTGAATTCCTCCAGA 2886
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2887 TAGAGTTTAAACCAGACAAACAGCCTACGAACATGTTACAATATTCAAAAACTTCTAATTTAGTCACCATCACT 2960
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2961 TGCAAATAGGGATATCTCATGGAAATACGATTTCTGATTTATCTTGAAAAGTCAAGATGATCTGGCCACAATGG 3034
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3035 GCCTGCACTCCTGTGAGGTGGTATCATTGGCTTGGGGGTCTCACCAGTGCCACCCTGCATGGGGGCACCGGGTG 3108
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3109 ACATGATGCTCGATTGAGCTTTCCCTCCAGGCTGGGTAATCAGAGGCCAGGCCCTGTGTGTCTTCCAGGGGATG 3182
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3183 CTGTCCTGATCCAGGCTGGTGAGGCAAGGAGGGGCTGCGGCTTCCTGAGCTCTCCGAGCTGCTAATGTGCGTGG 3256
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3257 GGAATGCTAAGCAGCCTCCAGGCTCTGACCAGGTTTGTCTTCTAGGACCCACTTGCCCAATGGGTGCCAGGACA 3330
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3331 CCAGGTCTGGGTCTGGAGAAGAGAATTCTTCTCCAAGGGATGTTGATGGTCCATTCCGGAAATGAAAGCTTCCC 3404
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3405 ACGGTCTGCCCTGCACCAGGCTTTCATCAGTGAGAAATACCCCGAATTTACACCCAAACCTAAAAGGAGAAGCG 3478
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3479 TAGAAGTGTTCTTGGCCCAATTCTTTTAATTGCAAGTCCTACTAGCAGGACAACTAAGGGATTATCCCTAAACT 3552
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3553 TTCATTTAAAAGTCTGGGGAGGGAAGGAAGGAGTAAAAACTTTGGCAGTCAGATTTTTCTCACTTTCACATTTA 3626
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3627 TTCTTTACTATTAATGACTTGTTCATCATGCTGTACAACAATTGTGCAAAGATGCATACGTTTGCCACTATAAT 3700
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3701 TTGCCATTAAAATGTAATAATCAGTAAGTATACACGGCGTGCCAGGTGCTAAACAGCAGATGAGGGGCGAGGTG 3774
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3775 GGTGAAGGTTCCATGCCGTGAGTTTGTGGCTAATGGAACCCCTCATGCTGCTGCTATCCTTCCTGGGCCCAGCA 3848
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3849 GTTGGATCCTGCAGGGGTGCCCCACTCTCTCGGGGACCTCAGAAATGTCCTCTATGGTTAGGGACGGCTAAGGA 3922
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3923 GGGTGTATCTGCAGGATTCCCAGGCACTGGGAGGTGTATAGAGGTCACAGGACCCATACAACCACCCCAGACCT 3996
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3997 TGTCAGAGTGCTCCAGTCTGGCATCCGCAGAAGGCCAGGGAGGGTCAAGGGGCAGTGCTGAGCCACTGAACACA 4070
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4071 GCCACAGAGTTGGAGCTGCCAGGCAGAAGGTGCACGGCTCAGCAGAGGAGACCCCTTGAGGCAGCAATGCTGGG 4144
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4145 GCCGGAGGGTCAAGGCTGAGGAGAAGGCCACCGCAATGCCCTGTGTGGCCCTCATGAGCTGAGGGACCATGGGA 4218
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4219 AGGTGGCCTAGCCACTCTGAGCCTCAGTTTCCCCGGGAGATAAAAACAGAGACAGTATCTGCAAACTCAACAGG 4292
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4293 GCATTATGGTGAAGAAATGAGAGGACTCAGGAACATGTTAGCTGTCACAGCCTTAGCCACTGCCAACTCCAGCC 4366
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4367 AGGCAGCTGGTCAACATTGCCGAGCACCAGCCAGGTGACAGGAGGACAGAGGGCTCGGGGGAAACCAAATCCAT 4440
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4441 CCCCCCAAACAAAAGAAAAACACAAACAAAAATAGGCACCAGAGCCGCCGGACGTGTACAAAGACTGTGTACGT 4514
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4515 TCTGCCTGTGGACAGAGCCCAGGAAGAGCACCCTGGCTCCTGTGCTCCACGCCTGCAGCTCATCTGGAAGGTTC 4588
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4589 CCTGTCTATGGCAGCCAGGTACCCAGGCCAGCCTGCAAAGGCCCAGTAACAGAACTTGTGTCTAAGATAGAACT 4662
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4663 TCATAGCTTTGTGCTGCCAAGCCCACCTGGAGCCCCCTTTAAGCCTTCTTTTGTTTGTTTGTTTGTTTGTTTTG 4736
Query 187 -------------------------------- 186
Sbjct 4737 AGACAGGATCTCATTCTGTTACTCAGGCTGGA 4768
