Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15487
- Subject:
- XR_001752918.2
- Aligned Length:
- 4374
- Identities:
- 160
- Gaps:
- 4188
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTAAAAATAATAAATGAATAAAATAAATATATAAATAAAAATTTGACCGACAGCTTAGTAAGGATTATATAGTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATGTCTGCTACTGTTTAAAAAGGCTTTTCTTTTTTTTTTTTCTTTGACATAGAGTCTTACTCTGTTGCCCAGAC 148
Query 1 ----ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCC 70
.|||||||||.|.||||..|||||||||||||||||.||||..|||||||||.||||||.||||||.|||
Sbjct 149 TAGAGTGCAGTGGCACGATCTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCAATTCTCATGCCTCAGCC 222
Query 71 TCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTT 144
|||..|||||||||||||||||..|||||||||.||||....|||||||||.|||||||||.|||||.||||||
Sbjct 223 TCCCAAGTAGCTGGGATTACAGATGTGTGCCACCACACATGGCTAATTTTTTTATTTTTAGTAGAGATGGGGTT 296
Query 145 TCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-------------------------------- 186
|||||.||||||||||||||||||||||||||||..||||||
Sbjct 297 TCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGGGCTCAAGTGATCTGACTGCCTCAGCCTCCCAAAGTGGTG 370
Query 187 -------------------------------------------------------------------------- 186
Sbjct 371 CTATTACAGGTGTGAGCCACCTCGCCTGACCTAAAAACACTTTTCAGCTCCAATTTTAAACTTAAAATTTTTCT 444
Query 187 -------------------------------------------------------------------------- 186
Sbjct 445 TATTTTAAAAACAACATATGCATGTATTATCAAATACAGGAAAATATGAAGAGACAGAAGTACTTACTGATCAT 518
Query 187 -------------------------------------------------------------------------- 186
Sbjct 519 AATCCTACCACCAGAGACATCACTATGAATATGTTTGTACATTTTTTTCCTGTGCATTCTAAAACATAGTTAAG 592
Query 187 -------------------------------------------------------------------------- 186
Sbjct 593 ATTATGCTAAATATACAGTTCTCATGCTCTTTTATGTCAGAAGTGTTTTCCCATGACATTTTAAACCCCATAGA 666
Query 187 -------------------------------------------------------------------------- 186
Sbjct 667 CATAATTTTCTAATGGCTACATACTATTCTATCTAACCATTTCCAGAGGTTGGATATTTATCCAGCTTCTGAGA 740
Query 187 -------------------------------------------------------------------------- 186
Sbjct 741 CTTCCTGTTATAAAACAACACTTTGATGAACATCTTGGTACATAAATCTTTTGCATGTGACTACTTCCTTAGGA 814
Query 187 -------------------------------------------------------------------------- 186
Sbjct 815 CAGATTCCTAGAAGTGAAATTCTGGGTCAAAGAGTAGTAATATTTTAAAGGCTGTTTATGCATACTGACAAGCT 888
Query 187 -------------------------------------------------------------------------- 186
Sbjct 889 GCTTCCTGGCAATTTGTCCAAACTTTTACTCTGACTAGCATTGTATGGGAGCTTCCCTGAGTGAATGCTGCCTT 962
Query 187 -------------------------------------------------------------------------- 186
Sbjct 963 TGAAGTGGGGTCAGAGACTGAGGACCAAGGGGCACAGAGAAAGAAGAGTGTGGTCCTCGATGGGAGGACCCATC 1036
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1037 ACAAACCGTCTTGCACAGTGTAAACCCTGGAGAGGGGCTGAAGAAACCACTGCAGCCCGGGGCCGCCCATTCTA 1110
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1111 CCTGGCCCATGGTAGGCACTCAAGAAATGGTTTGCTACGTGAATAAACAAATCCACAAACATATATTTCTGAAT 1184
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1185 TCCTATCATGCGTCAAACACAAGAGATAGGGAGAGAGGAGGAAAAGAAAAGCAAGGGATCATGGGATAAAAGGG 1258
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1259 GACAGTGGCAGTGGGGTGGACAGAAGTCAGAACTAAATTTACCTCATGCTTTAATTCGGCGAGTTTTCTTAGAA 1332
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1333 TAGTCTGACCATTGCTTACGTTGAGGGTCTATAGTCCTCCCTTCCCCACAAGACAAAGTCCAACCTAATTCAGC 1406
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1407 ACCAAGATCCAAGCAGCTTGGAAGATACAGGAGGGAAAATTCTGGTGTAGATTAAGTGCCACCCCCCAGCAATG 1480
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1481 GCCAGGACACAGCAGCAATGTTACCTAAGAAAGCAACTGCGCCTCTTGCTGATCAGCTAGACATGAGGGCAGTG 1554
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1555 TCCTACCTCAGCGGTTTGCAGCGGACATGCTGTCAGGCCATTGGGATAGTTCCCATAAGCCACTCCTGGTTGTC 1628
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1629 ACCACTATTCCAAGTGGGCAGGAGCAGCCTTATTGACTGAGATGGGCGGCTATGGACACACATGGGTGTACGCA 1702
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1703 TGTGATGGAAATGGGGGCTTGGGGCCCTGAGGGTCCACAGGGGCTGCGTGGTCAGGGAGGGTGGGCATGGCATC 1776
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1777 ACAGGCACCCCAGGGGAGAAGCTGGCTTTCTTCCCATACTTTTGGCACTGTTTTCTGTTTTGTTTGCCTTCAAA 1850
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1851 GAGCAAGTGATGGCTGGACAGCAAAGAGGAGTGGAGGCCGGGAGAATGGGCAGCTAGCCCAGCGCTCTCCAATA 1924
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1925 TCTGGGAGTCGACCGCACTCCTGCACTCCCTGTCATCCCTGCTAATGGTGAGGAACTGAGCAAAAGAGCCTCCA 1998
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1999 GAGTGACAGGTGACTTAAAGCGCACGTGGCTCTACATTTACAATTGAAGTGGGCTTTGGAGATTGCAGATTCTG 2072
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2073 AATACCTGCTGGGGTGGTACAGAGGCTGTGTTCTGGTTTTGCCATCTTGGACAGGGGGTTGGGAGTCTGGGGGG 2146
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2147 CTGCCTTCTCTCCTCTTCGTGCAGCTCTGCTGGGGCCTGTCTCACACTTGTGAGCAGAGTTATGGCTGGATTCC 2220
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2221 AGGGGAGACAGAGCTTGGTTGTGAAATGTAAGGTTGTGAAATGAAGGGCTTGTGAAATGAACAAAGAATGTATT 2294
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2295 TAAGGGTCTTTCATTTTAAATCGAACACTTACATAGCACTTACTACTTGCAAAGCTCCACTCTAAGCACTTTAC 2368
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2369 CCATCTTAATTCATTTAATTCTCTTCTCAACCCTAAAAAGCAGGTATTACCATTGCTCCAATCTTACAGATGAG 2442
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2443 GAAACTCAGGCATGGAGAGGTTGAGCGACTTGCCCAAATTCATGCAGTTAGGACCTGGCAGAGCTGCGCTTTGA 2516
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2517 ACCCAGGCTGCCTGGCTCTAGAGTGTGTGCACGAAACTTCACTGCCATATGAACAAAACTGCAGGACATATGTT 2590
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2591 CTCAAAGCAAATAAGCCTCCCAGAGAGGCTTTTCCTGATGGCTTCAAGGACCTGCCCTAGCCTGGTCTGACTTC 2664
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2665 CCAGAGGGGATCCAGTCCCAACATTGGCCCTATCTTTAGACCACATTTCCATCCCATTCTCAGTGAAAACCCTG 2738
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2739 AGTCATGACAGAAGACAACCAATGCTGGAGAGAGGAGGTTTCAGGGGATGCTGTCCTGATCCAGGCTGGTGAGG 2812
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2813 CAAGGAGGGGCTGCGGCTTCCTGAGCTCTCCGAGCTGCTAATGTGCGTGGGGAATGCTAAGCAGCCTCCAGGCT 2886
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2887 CTGACCAGGTTTGTCTTCTAGGACCCACTTGCCCAATGGGTGCCAGGACACCAGGTCTGGGTCTGGAGAAGAGA 2960
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2961 ATTCTTCTCCAAGGGATGTTGATGGTCCATTCCGGAAATGAAAGCTTCCCACGGTCTGCCCTGCACCAGGCTTT 3034
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3035 CATCAGTGAGAAATACCCCGAATTTACACCCAAACCTAAAAGGAGAAGCGTAGAAGTGTTCTTGGCCCAATTCT 3108
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3109 TTTAATTGCAAGTCCTACTAGCAGGACAACTAAGGGATTATCCCTAAACTTTCATTTAAAAGTCTGGGGAGGGA 3182
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3183 AGGAAGGAGTAAAAACTTTGGCAGTCAGATTTTTCTCACTTTCACATTTATTCTTTACTATTAATGACTTGTTC 3256
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3257 ATCATGCTGTACAACAATTGTGCAAAGATGCATACGTTTGCCACTATAATTTGCCATTAAAATGTAATAATCAG 3330
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3331 TAAGTATACACGGCGTGCCAGGTGCTAAACAGCAGATGAGGGGCGAGGTGGGTGAAGGTTCCATGCCGTGAGTT 3404
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3405 TGTGGCTAATGGAACCCCTCATGCTGCTGCTATCCTTCCTGGGCCCAGCAGTTGGATCCTGCAGGGGTGCCCCA 3478
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3479 CTCTCTCGGGGACCTCAGAAATGTCCTCTATGGTTAGGGACGGCTAAGGAGGGTGTATCTGCAGGATTCCCAGG 3552
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3553 CACTGGGAGGTGTATAGAGGTCACAGGACCCATACAACCACCCCAGACCTTGTCAGAGTGCTCCAGTCTGGCAT 3626
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3627 CCGCAGAAGGCCAGGGAGGGTCAAGGGGCAGTGCTGAGCCACTGAACACAGCCACAGAGTTGGAGCTGCCAGGC 3700
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3701 AGAAGGTGCACGGCTCAGCAGAGGAGACCCCTTGAGGCAGCAATGCTGGGGCCGGAGGGTCAAGGCTGAGGAGA 3774
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3775 AGGCCACCGCAATGCCCTGTGTGGCCCTCATGAGCTGAGGGACCATGGGAAGGTGGCCTAGCCACTCTGAGCCT 3848
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3849 CAGTTTCCCCGGGAGATAAAAACAGAGACAGTATCTGCAAACTCAACAGGGCATTATGGTGAAGAAATGAGAGG 3922
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3923 ACTCAGGAACATGTTAGCTGTCACAGCCTTAGCCACTGCCAACTCCAGCCAGGCAGCTGGTCAACATTGCCGAG 3996
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3997 CACCAGCCAGGTGACAGGAGGACAGAGGGCTCGGGGGAAACCAAATCCATCCCCCCAAACAAAAGAAAAACACA 4070
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4071 AACAAAAATAGGCACCAGAGCCGCCGGACGTGTACAAAGACTGTGTACGTTCTGCCTGTGGACAGAGCCCAGGA 4144
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4145 AGAGCACCCTGGCTCCTGTGCTCCACGCCTGCAGCTCATCTGGAAGGTTCCCTGTCTATGGCAGCCAGGTACCC 4218
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4219 AGGCCAGCCTGCAAAGGCCCAGTAACAGAACTTGTGTCTAAGATAGAACTTCATAGCTTTGTGCTGCCAAGCCC 4292
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4293 ACCTGGAGCCCCCTTTAAGCCTTCTTTTGTTTGTTTGTTTGTTTGTTTTGAGACAGGATCTCATTCTGTTACTC 4366
Query 187 -------- 186
Sbjct 4367 AGGCTGGA 4374
