Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15487
- Subject:
- XR_002957914.1
- Aligned Length:
- 2932
- Identities:
- 161
- Gaps:
- 2746
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGGGACGCGGGAGGAAGTCCGGCCGGGCGCCGGAGCCCACATGGCGTAGGGGTGCGGTCCGGGGGCGCGCGGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTGGGGCCCGGTCGGCACGTGGGGCGCTGACAGTGGCGCCGTCTGCCTGGGTGGGGCGCCCCGAGCCCGGGAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGGCCTTCGCGGGGCGGCCCGCGGCGGTGGCCGGGCGGGGAGCGGACAGCGGGCAGCGCGCCCAAAGACCCGGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCGAGTGCCGCCCCTCCGCGCCCCTGCCCTGCTCTGGAGTCCGCAGTTACCCACTTGAGATGGGAACCGTATG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAACGGAGTGGGGGCCGCGGCGGATCCCTGCCACGAGGCGCAGAATGAGGACAGATGGAGCCAGGAGTCATTTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTATTGTCTACAGGAGAAAAAAAGAAAAACCTCAGCTTGCAAATTTTTGTTCAGAGATGGGATCGTTCTTTGTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTTGGAGGGATTTACATTAAAAAAATTCAAGAAATATTGTCTCATGTGATCTTACCAGATAAGTGCCTATTATT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AAGACTTGTTGGCTGCTGGATTTATTATCTTAGCCTAATTTTCTTTCTGAGTTAAATGAATCTTGCTTTTTTAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CGTTACCACCCTGGCATAATCCAATGGGAATATAGTATGAACCACATAGTTAATTTAAAATTTTCTTTCTTTAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTTTGTTTTTTGAGACAGGGTCTCACATTGTTGCCCAGGCTGGAGTTCATTGGCACAATCATAGCTCACTGTGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCTCAACCTCCTGGGCTTAAGTGATTCTTCTGCCTCAGCCTCCTAAATAGCTGGGACTACAGTTGTATGCCTCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACGCCTGGCTCATTTTTACATTTTTTTTTGTAGAGACAGAGCATCACTGTGTTGCCCTGGCTGGTCTTGAACTC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTGGCCTCAAGCAACCCTCTTAGCTTGGCCTCCCAAAGTGCTGGGTTTATAGGCGGGAACCACCACAGCTGGCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAACATCTCCTGAGTGTAGTGTTTCCCTAACCCCTTCTTAGAAAGTTGGCACATTTAAAATTGTTTTCACTCTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTGAGCCCTAATGGAAATGCAATGAATGTACAGATGGAGGCTAGGGGTCCTGGTCAGAAAAGGGAAGTGAGGCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGTTGTGGTGGCTCATGCCTGAACCCAGGAGGTGGAGGTTGCAGTGAGCCCAGATTGTGCCACTGCACTCCAGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTGGGCGACAGAGTGAGACTCCATTTCAAAAAGAAAAAAGAAAAGTGAAAAAATGAAGTGATGTGACTGGAAGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AACCAGTGTGAAAATCAAAGGAAAACACAGTAATTCAGTAAAAATTGATTGTGTATTTATTCTATACAATACAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CATGCCAACTTGTTGAGACTACTGAAGTAGAGAAAAAAGTCATCCACCCACAGTTCATTCTGGAAGTCTACAAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTAGGGAACAAGAACTAAGATACATGTGTACCTATAATTTATTTATTTATTTACTTACTTATTTTTGAGACAGA 1480
Query 1 --------------------------ATGCAGTGGC---GCCATCTCAGCTCACTGCAACCTCCATCTCCCAGG 45
.|||||||.| |..|||||||||||||||||||||||.|||||.||
Sbjct 1481 GTCTCGCTCTTGTCGCCCAGGCTGGAGTGCAGTGACTCAGTGATCTCAGCTCACTGCAACCTCCACCTCCCCGG 1554
Query 46 TTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAACTAATTT 119
|||||||.||||||..|||.|.||||||||||||||||||||||||||.||||||||..|.||.||.|||||||
Sbjct 1555 TTCAAGCCATTCTCCCGCCACAGCCTCCTGAGTAGCTGGGATTACAGGTGTGTGCCAGCAGACCCAGCTAATTT 1628
Query 120 TTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------- 186
||...|||||||.|||||||||||||||||..||||||||||||||||||.||.|||||||||||||
Sbjct 1629 TTAATTTTTTAGTAGAGACGGGGTTTCACCACGTTGGCCAGGCTGGTCTCAAATTCCTGACCTCAAGTTATCTG 1702
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1703 CCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGTACAGGTGTGAGCCACTGCACCTGGTCCCCATGTGTGCC 1776
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1777 TCTAATTTAAAGAGGTGTCATGTCCTAGGGGAGTGATCATTAGCCCTTCAGGGTAGGGGATGGACAGGGAATGG 1850
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1851 GATAGAAATGGGGGATTAGGTAGGCAAGTGTGTACTACAATTAAGGAGAATCCTTGAGCTAGAACTGTTATCCA 1924
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1925 AAGTGTAATCGAGAACCACATGTGGCTATTTAAATTTATTAAAATTAAATTTAAAATTCAATTCCTCAGTCATA 1998
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1999 ATAGCCATGTTTCCAGCGCTTAATAACCACATGTGGCTGGTGACTATCATGTCACAGCACAGATATAAAACATT 2072
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2073 TCCATCACTACAGAAACTTGGACAGAATTTTGTCACACATATTTCTTACTTTCATGCAATGTGAGACACTTCTG 2146
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2147 TGACAGATCCGAAGTTGTATTTTTCTTTAATGAACACCCATTTGGCTAACAAAACTACAGTTTCACTCAGGATG 2220
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2221 CCTGTGTTTTGTTGTTATTGTTTGATACAGGGTCTTACTCTGTCACCCAGGCTGGAGTGCAGTGGTGTGATCAC 2294
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2295 CGCTCACTGCAGCCTCCACCTCCCAGGTTCCAGTGATTCTCCTGCGTGGGACTACAGGCCTGTGCCACTATACC 2368
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2369 CGGCTGATTTTTAAATTTTTTGTAAGGACGAAGTCTCCTTGTGTTTCCCAGGCTGGTCTCAAACTCCTGGCCTC 2442
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2443 AAGTGATCCTCCTGCCTTGCTTCCCAGAGTGTTGGTTTTACAGGCATGAGCCACTACACCCGGCTTGAAGATTA 2516
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2517 GTTTTGTATCTAAAGCAGTATGAATTTAAATTGCTGATTTATGAAATACATGCATCAAGCACTTTTTAAGACTT 2590
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2591 AGCCAAACATTTGTGTTTAAAACATGTAACTTGAATCAAAACGTAGCTTTTTTTTTTTACCTGCCATGATGTCT 2664
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2665 GTGGCCTTGACTGACGTATGCTGTGAGGATATGCTGGCCAAGTAGGATTCTCCATATTCAAGTCCTTTGACCCA 2738
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2739 TGATCATAGCTTTAAAAAAAAATTGTACACTCTTTTAAAAAATTGAAGCAAAATCCACATAACATAAAACTGGC 2812
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2813 TGGGCGCAGTGGCTCACGCTTGTAATCCCAGCACTTTAGGAGGCCAAGGCGGGCGGATCACAAGGTCAGGAGAT 2886
Query 187 ---------------------------------------------- 186
Sbjct 2887 CGAGACCATCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAA 2932
