Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_15487
Subject:
XR_002958144.1
Aligned Length:
2666
Identities:
158
Gaps:
2483

Alignment

Query    1  ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCT  74
               |||||||||.|||||||||||||||||||||...||||||||||||||.||||||..||||||.|||||||
Sbjct    1  ---CAGTGGCGCAATCTCAGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGTGATTCTTCTGCCTCAGCCTCCT  71

Query   75  GAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCAC  148
            ||||||.|||||.||||||||...|||||.||||.|..|||||||||||||||||||.|||||.||||||||||
Sbjct   72  GAGTAGTTGGGACTACAGGCGCCCGCCACCACACCCGGCTAATTTTTGTATTTTTAGTAGAGAAGGGGTTTCAC  145

Query  149  CCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------------------------------  186
            |.|.|||||||||||||||||.||||||||||||...|                                    
Sbjct  146  CATATTGGCCAGGCTGGTCTCAAACTCCTGACCTTGTGATCCGCCCGTCTCAGCCTCCCAAAGTGCTGGGATGA  219

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  220  CAGGCGTGAGCCACCGCACCCGGCCCAAGTCTTTCTTTATAGCCTCCTACCCTACCAAGCCATCCAGTTGCATT  293

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  294  TTCCCTCCCTGTCTTGAGTTCTTCTTTCCTAAGCTTCTGTTGTAGACCTGGCCTGCTGGAGTGCTCTGCTCCCC  367

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  368  TGGGAACCCTCTGGCTGGAGAGGCTCCTGAGCCACAGAACCAGAGAAGAGGAGAGTAATGCCAGAGGATCCCTA  441

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  442  AGCACAGTTGTACAGGAAGCATGATGCTGGCATCTGCTCAGCTTCTAGGGAGGCCTCAGGAAACTTAAAATCAT  515

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  516  GGCGGAAGGGATGCAGCAGTTCACATGGCTGGAGCAGGAGCGAGACAGAGAGTGGAGAGGTGCTGCACACTTTT  589

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  590  AAATGACCAGTTCTCGTGAGAACTCACTGTCATGAGAACAGCATCAAGAGGATGGTGCTAAACCATTCATGAGA  663

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  664  AATCCACCCCCGTGATCCAATCACCTCCCACCAGGGCCCACCTCCAACACTGGGGATTACAATTTGACATGAGA  737

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  738  TTTGGGCGGGGACACAGATCCCAAACCATATCACCCTCAGTACCTGTTGCTGGCTGACAGTTGGTCAGTGTCTA  811

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  812  GGGGAGAACCATTCTCAGCTTCAGTTCCACGATAGCGAATACCATCTTGGCAAAAATCCCCTGGACAAGTCAGA  885

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  886  GACCTCACTAAGTCTCCAGCATCTAGCCTGATGCCTGACACATACTGACCCTCAATAAACGGCTGTTCAACTGT  959

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct  960  GGGCACAGGAATGGTGAGGAGGCTGTGGGCACAGAGGACGCTGGCCCTTCTTTGGAAGCAGATGAAGGTCTGGG  1033

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1034  TGTTGATGAGGGGTTCCTCGAAAGTCCCATGCTGCTCACAACACCCAACACTCCTACAGACTGTGACCATGTTC  1107

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1108  TGTTGACAACTGAGCCTGCACAGGATCTTTATGCAGTAGGGAACCGGCCCGGATTCTCCACAGGGAGAATCTCC  1181

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1182  CAGATGTTTCCCCGCTTTCTGCCCCAAAGTCAAGATCAAAAGCAGTTGGCAGCTGCAGACATCAGCAGAAGTCA  1255

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1256  GTGGAACACAGTGTGGAACCATGTCGCGCTGGAGGAGGAAGTCTCGCGCTGGAGGAGGAAGTCTCACCCTTGAC  1329

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1330  AGAGACTAGAACTGGGCCTTAGAAGCTTGAACCAACCTCTGTCCCTGCGAGAGCAGCACACTTTTGTGCTCCTC  1403

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1404  AGCCCTTGCGTCTTCTTTGCCTGGAATATGGCAAAACGTTTATTTTCCCCCACTAAATGAGGCTCCTCTAGGGC  1477

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1478  TGCAACTGTGTTTGCCCATCTCTCTTTCTCTAGCAGCTAGCACAGGGCTAGCAGTCGGTGCTTGTTGAGCCGGT  1551

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1552  GGGTGAAGAGACGAGAGCACACCTCCTGTGTGCCCGGCATGGCGGGACCTGGTGCCGGCAAGTGGTGGGCTCTC  1625

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1626  TGGCCTCATGCTCTGCGCTGGTGATGTCAAGGGGTGGGCTTCTGTCCTGCCACTGATAGTAGGAGGGAAGGCCA  1699

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1700  GCAGGAAACGCCGAAACCTACTCAAGCTGCTGGAGAAGGGGGAATCCAGCCCTGTTTCAGGGGAAGGAGTATCC  1773

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1774  TGTGTTCTGAGAGCGAGAGAGCAGCTTAGCCGGCAAATCCTTAAATCCTTCAGAGATTACAGGATTGTGCAAGA  1847

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1848  GGGAAGGCCAAGAGGGGGACCTCTGAGGCAGCTCCAGCATGGCCTGTTGTGTGCAGAGGACTGAGATCCCAGAA  1921

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1922  CATGCCACACCAAGAAGACATGTCCCAAGGGGCAGTGGAGCCACAGCCACCAGAAGGGACCTGGCCCTGTCGGA  1995

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 1996  CCTGCTGAAGCTAGCCGTGGAGTGCAGGGGCTTTGTTGGTCTGGCTGCTAACCAAAGGGTGGCTAATGGGACCC  2069

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2070  TTTCCAGGGGCCTCTAGGGGATTTCAGTGGGGGCTTGCTTCGAGGCTCTATTACCACTGGACTGTTTACCAAGA  2143

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2144  GCCTCAGCCTGACAGAGATGGGAAGAGACGAGTGAGCATTTCTGACCCAACACCCCCACTGCAGAGTTGGGGAA  2217

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2218  ACATTTACCCAAGATAGGAGGAATAAAAAGGAAAAAAATTGAATTTATTTCCAAAAAACATACCAAGGTGGACA  2291

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2292  AGATAGGAAACAATACAATTTATATTACAGTTTTATTATTATTTAAAAATTTTATATTAACAAAATGAGATGGG  2365

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2366  ATCTGCCTATGTTGCCCAGGCTGGTCTTCAACTCCTGGGCTCAATCTCCTCGGCCTCCGAAAGTGTGATTACAG  2439

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2440  GCGTGAGCCACCGCACCCGGCCCATATTACAGTTTCATAGTGTTTTTGATTACTCGTGGTAGGAGAAATGTGTC  2513

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2514  TTCTTTGCACTTGGGGTCTCAACGTCTCAGTCCTGCCCTATGCCCCGAGACCCCAAGAGGCTTTCCCAAGGTCA  2587

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2588  GGCAGGGAATCCGCAGAGAGGCAGGGCTGGACTCCAGCATCCTGACTCCCCAGTTCGTGCTCTGTGCTGCAGAG  2661

Query  187  --  186
              
Sbjct 2662  AC  2663

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