Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15487
- Subject:
- XR_930386.2
- Aligned Length:
- 3244
- Identities:
- 161
- Gaps:
- 3058
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGACCCCACCGGAGAGGAGGAGGGTGGCACAGGGGCCTGACGGACCTGGGGTATGGGCAAGGCTTCCAGGGGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGTGACATTCAGACTAGGCCTGGGTTGGCCAGGGCAGGAGCAGGGAAGGGTGTTCCAGTCAGAGGGAACAGCAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAAGGAGGGCTTCGAGGCTTTAGGGGAAGCAAAAGAAGGCCTGGGAGGCTGGCAGGCAGAGAACGGCTGGGGAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGCCGCTGGGAGGGGTGGAGAGGTGAGTAGGGCCCGTGGGAAGCACCTGGCGAAGAGTGTTTCTGATCCCCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATCCAGTATGCGTGCCGGGTTCTCGGGCAGAGTGGCCAGGCGGAACGTGACCAGGGTTCAGTGGCAGAGCCTGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AACCAGCCTGGGGGTCCTGCTTCTCAGGCCCCGGCGTGTCCTTAGGGGAAGGGGAAGGAGACTTCCCAGGGCAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGCTGCAGCAAGAGCTGGCACAATGCCATCCTCAGGGGGCACAATGCCCCCTCAAATCCCAGAAGCAAGGGGTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGAGGAGGGAGTATGGGATATATGGGGAGGAGCAACATCCCTGCTGCTTGGAGGGGGAAACTGAGACCCTCACA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GATTTTTGCTGAGTGAGCTTCTGTGAGGTCCAAGAAAAATCTTTTCCTCCCCGGCCTCTAGCTGTCAGGAGCCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCCATGAAAAATAGGGGAGGGTCATTTTCACACCCTCCCCCATTCCAGATGTGGCAGGAGCAGGAAGGATTTGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCCAGATGTTGGGGTCTGCGGGCCCAGCAAGTTGCCTGGGGCTCTGCTATTGAAAAGTGAACCTTAACTGGGTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGCTGCGCTAGCGGTGATGGCCGTGAGATCCTGGGGGATGTGCTCCGTGGCCCTGGTCATGTCTGAAGGGAGAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCAGGGAGCCCAGGCCTCACTGTCAGCAGCACCTGACTTTTGCTTCCACGGTCACCCTGGCAGATCCTTCTCAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCTGCTTGACTCAGGGCATGACTTCCCTGCCTGGATCCCAGGCTTCCTACCCTGCCCCTCGGGCCCCTGGACTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTCCAGAGTGTTCTGGACACGAGTGGTCCAGCAGAAATGAAGCTCCTTACCCCACTGAAAACGTCGGGTGTCTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGCCCTGGGTGAGGATGGCACCCAGTGTGGCCTCATCCCCCAGATCAGAGGCCTGGCTCTGCTGGGGTTTGTCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTGATTAATAAAAAATGGGGAAGCAAATCAATTAGCCCTTCACAAATGCAACTCAGATGGCAGGAAAAAAAATC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCTCATGATGCTTGGGGGCCTCTTCTTCACAAAAAGATGGGAACACACAGAAAGTGTTGGCCCGAGACCCCCGC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTCCCATCCTGATGGGAACTGCACACGTGCTTGAACAGGGAGAGGACACTGAATATGTACAGATTAAAAACTTA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGGGTCGATATTCTGGAAGCCAAGTGGTTTCTCCAGATGTCTGCTGGCTGTGTTGGAATCTCTGGAACGCTGGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TAAATGCAGATTCCTGGGCCCTCTTGCTCTGACATCCTGATACGTGGAATCCAAGGAGCCGGCTCAGGTGTCTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TCCCTCCAGGAAGTGGGGCTTGTGCCCTTTGGATACCTGCACTCCCCATCACCGCACTCCCCATCGTGGCACTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CCCTTGTTGCAGTTTTATGGAGTGTGCGTCTGGCTCTCCAACTAGACTTGAACCGCTTGAGTGCATAACTCGGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ACTTGACCATTTGCGTCTCCCTACGGCCAGCTCAGCCTCCGCACACAGGGACCTGCAGAGAGTGGATGTAGCCA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTGCCCCAGCGTCCCTGGGCTCTGAAGAGAAGCCATTGCCCTTCAAGAGCCACCCTCATTTCCTGGGCACTGGT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGGAAAAAACGAAGAAAAAGAGACACCCAGCTCACCTCCAAGTTTGCCTGCAGGTGAATATCTTGTTGAAAGAG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGGGGACTCCCTGAGTCTTGCTGGGTTGAGGAAGCTGATTGGATTTCCGGACTCAGAGGAGGGCTGCAGAGAGG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GAGGAATGGGGGGGATGGGCAGCTGGCTTTCTGGATGGGTGCAGGACAATGACATTGATGGGGAAGCTTGGGGT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GGCTCTGCCGTTGCCCACTGCTTGGCTGGTGAACTTGCTACATCTTGGCCAGCACTATCCTCTTCTGGCCTGCA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CCCTGCCAGACACAGGCAGTACCCCAAATACCCTGTCCCTGTGCCCCGAAGTCTCCATGACCTTCAGATCCCAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GGGACAAGTGGCTCCACGAGGCAGGGCCTGTCCCTCTGGCTCACACTATGGAGTCCACAGAACCTAGCCCGGAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CCTAGTGCACAGTAGGTGCTCAATGTATTCTATTTGAATGTTGCATGAGTGAATAAATGCAGGAATGTCAGGCT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GGAAAACAGGTATTTGTACACCTGTTTTCATAGCAGTGTTATTCACAGTAGTCAAAGGGTGGAAGCATCCCACG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TGTCTGCTGATGGGTGAACGAGTAAACAGAATGTGCCCCAGCCATACAATGGAATGCGATTCAGCCTTTTTTTT 2516
Query 1 -----------------------------------ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCT 39
.|||||||||.|.|.|||||||..||||||||||..|||
Sbjct 2517 TTGAGACGGAGTCTGGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACGACCTCAGCTTGCTGCAACCTCTGTCT 2590
Query 40 CCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAAC 113
|||.||||||||.|||||||.|||.||.|||||||||||||||||||||||||||.|||.||||.||||....|
Sbjct 2591 CCCGGGTTCAAGTGATTCTCCTGCTTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTACCACCACACCTGGC 2664
Query 114 TAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCA--GGCTGGTCTCGAACTCCTGACCTCAA 185
||||||||.|||||||||.||||||.||||||||||.||||||||| |||||||.||||||||||||||||||
Sbjct 2665 TAATTTTTATATTTTTAGCAGAGACAGGGTTTCACCATGTTGGCCAGGGGCTGGTGTCGAACTCCTGACCTCAA 2738
Query 186 G------------------------------------------------------------------------- 186
|
Sbjct 2739 GTGATCCTCCCTCTTCGGCCTCTCAAAGTGCTGGGATTACAGGCGTGAGCCACGGCGCCCGGCCACGATTCACC 2812
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2813 CTTAAAAAAGGAAGGACATTCTGACACATGCTACGACTTGGGTGAACCTTGAGTACCTGAGTGAAATAAGCCCA 2886
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2887 TCAAAAAAGGACAAATATTAGCCAGGTGCTGTGGCTAATGCCTGTAATCTCAGCACTTTGGGAGGCCAAGGACG 2960
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2961 GAGGATTGCTTGAGGATTGCTCAATACCAGCCTGGGCCACAAAGCAAGACCACCCATGTGAGGTGTTTAGAGTA 3034
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3035 GTCAAATTCATAGAGACAGTAGGATGGGGAGTGCCAGGAGCTGGGGAGAAGGGGGAATGGGGAGTTAGAGTTTA 3108
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3109 ATGGGGACAGATTTTCAGTTTTACAAGATGAAAAATGTTCTGGAGATGATGGTGGTGATAGAGGCACAATGTGG 3182
Query 187 -------------------------------------------------------------- 186
Sbjct 3183 ATATGCTTCATGCCACTGAACTGGACCTAACCATTTATGTTTTGTGTATTTTATCACAATAA 3244
