Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_15487
Subject:
XR_938572.3
Aligned Length:
2930
Identities:
163
Gaps:
2746

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CGGAGGTCCGGGGCGCCGGACCCGCCGCGGCCTCGCCGGGCCTGGCTGGCCTGTTTGTTCTATACTTCTAATGT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTAATAATTACCCAGAGCTTTGGATATATGCAATTCTGCAAAATAAATCAAAAGGAGTCAGAAGGCAATTTTAT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TTCCTAATAGACCCTTAGTTAGAATTTAACTTAAAAGCCATTTTTAACAAATGTAAACAATATCTCCCCTCCTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCCATCAAAGTCTGACGGAGACAAATGAAAAGATTTTTTAGAAGAATAGGACTATATCAAGACCAAAAAAAAAA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AAAAAAGCTAAGAAAGGGTACCATCAACAATCTTTACAGAACTTCTGGAAAGTAAAAAGCAAATGGTACTGGCC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGGGGAATAACCAAAGAAAATGAAACCTCAGCCCCGGATGGCAAAGGACACAACTGGAGAAACTAGTTATTTCA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CCAAGGCTTTGACTGGAATGGCATGCTTCTTTAAAGAATCAAAGTTGACTTGTAGAGCCAATAAAAGCCCCTTG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GGAAATGTGGCCTCATACCTTGTCTATGCCATCTCTGTACAAGATTCCCGACTTGTGATTTCATAGTGTTTACT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GATGGACCATGTACTTGGGATAAATTGGCCAACTGAAGGTTTCTTATGCTGTGGTGTCTGATCATGAGCTCTTG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GAAGCTTATGTTTTGTCTGGAATTAAGTTGGCACAAGTAGACATCCTGAGACATAAAGTGAAAAGGACCTAGAA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGAACTACTGGAAGAAATATCACCCCTATTAAACTGGGCAATTTTGTTTAAATATGAGTGTTCTGGAGGAAACA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGCATTGTCACCAGGCTGGATGGGACCCTTTCAAGTGCCACGATCACTCATATGGGTATCAGAGTGAAAGAAAA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ACCAGATGGTTTCATGCTTTCCATGTGAAGCCAGCTCCTCAGGAGGACTAGACTGCAGTTTCCACAAAGGATTT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GAAGTTTAATTTCCTAGAGTGACTAATATTGGTAATGAACTCAACTGAAAGGAGGTATTCTAAGGAATGTATTA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TTCTGACTACCTTGCTGTCCTAGTTGCAATAGTGTTTTGTTCAATTACTATAAGAATCACATTTTATTAGAAAA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TAAACATGTTATTTGTTACACCACTTTTTCTTTCTGTACTCCCAATAATGGTTCCTACAGTCACATTTCCTCTC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TCCTCTGAATTGTATTCCCAGTACAGAAATGCTGGGCCTGCATTTATGAATCCAACAGTCTGATTATTGGCCAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ATAAACACAAGACCATGTTCATTACTATGTTTTAATATCAAAGTAAAAGTAACTACTATGCATCCAGAAACCAA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  AGCCCTAAATTTCACACAAAAAAATTTGTTAACTGGTTTGATTGGAAGTATAGTATAGAAAAGAAATGCATCTA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  ATTAAGTGTCTGGCATTTATGGATAGAGACCTCAGAAGACAGCTCTAATGTCAATCGATTAACTTGAGAATAGA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  AGTTTTCTCCAGTCCTACTATGGATAGATAAACAAAGGTGGATATGCCTGTTATCTATGGTTATTTAGTTAACT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GTTATAATAATATAACTACTGGTTTGGACCGAGGTAAGAAATGGCCCAAAAGTTGGCTTTGTCCTCCAGACTTA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AAACTATTAGAGCCATGTACACTAAACACTGGAAATTCAATCTGTGCCCTTCAACGGGTACTTCATAATAAGAC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TTTGATACTATATAATGGCCACGAGTGTCTTTGCATTTTGCATCTGGGAGAAATTATTTGGGAAGATGGGATAA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TTACCAAAAGGCCTAGTTTATCCTATAAATGCAATATTACTCCTGTGACTGCTGAGAACTCAGAGGAAATTCAT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TGGGCCTTACAAGAAAAACTCAGTTAAAAAACATATATTATCAGGCTCCAGAGTTAAGCTATTAACTCGGCTAG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  GATAGGGATTTCTTTCTTTTTTGTTTGTTTGTTTGTTTTCTGAAGATGGATTCTCACTCAATAGCCCAGGCTGG  1998

Query    1  -ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCC  73
             .||||||||.||.||||||||||||||||||||||..||||..||||||||.|||||||.|||||||||||||
Sbjct 1999  AGTGCAGTGGTGCGATCTCAGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCGGCCTCC  2072

Query   74  TGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAA--CTAATTTTTGTATTTTTAGGAGAGACGGGGTTT  145
            ||||||||||||||||.||||.|||.||||  |||.|.|  .||||||||||||||||||.||||||.||||||
Sbjct 2073  TGAGTAGCTGGGATTATAGGCATGTTCCAC--CACGCCAGGTTAATTTTTGTATTTTTAGTAGAGACAGGGTTT  2144

Query  146  CACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---------------------------------  186
            ||||.||||||.||||||||||||.||||||||||||||.|                                 
Sbjct 2145  CACCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTCATGATCCGCTGGCCTCAGCTTCCCAAAGTGCTGGGA  2218

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2219  TTACAGGCGTGAGCCACTGTGCCTGGCCAGATTTCATTTTCTAAAACTACAAAATAATACTCAAGTAGTTAATC  2292

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2293  ATTTGAAAGCAGAAACAAAGACATGACAACAGTTTATAAAATTAATGTATCATGAGGATAATTTTTGTGTATGG  2366

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2367  CTAATCAAATATCTGCTTTAACCATTCACAACTGGTATATTTAAAGATTCCCCCAAGAAAAATATTGTACTAAT  2440

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2441  TTTTGATTCATCCCATTATAATTCTGATAATTGCTTTATTTTGTATTTTACCATGGACTTGCTGGATATAAATA  2514

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2515  TCTAAAGACTGCTGCAAACTGCCCAGAGAAAGGTTAAAATGTCAGAGTAAACAATTGGAAAACTGTAGTTTTAG  2588

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2589  TAGAAAATAGTAACAAGGAAAATTGTAAGGGTAAATACAAATCTAAAAATGAATTTTAATTTAAAATTTTCCTC  2662

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2663  AGTGCAAAAAGGAAAGAACTATTCCCCCTCCCTTTTCTTTCAGCATTTCCTTCAGAAAATGGAATTATAAATAA  2736

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2737  ACTTCTTGCCAGTTTTGCATCCTAGGAATGTCATTCTTTTTTTTTCTTTTATTATTATACTTTAAGTTTTAGGG  2810

Query  187  --------------------------------------------------------------------------  186
                                                                                      
Sbjct 2811  TACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCACGCTGGTGCGCTGCACCCACTAACTCG  2884

Query  187  --------------------------------------------  186
                                                        
Sbjct 2885  TCATCTAGCATTAGGTATATTTCCCAATGCTATCCCTCCCCCCT  2928

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