Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15487
- Subject:
- XR_938572.3
- Aligned Length:
- 2930
- Identities:
- 163
- Gaps:
- 2746
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGGAGGTCCGGGGCGCCGGACCCGCCGCGGCCTCGCCGGGCCTGGCTGGCCTGTTTGTTCTATACTTCTAATGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTAATAATTACCCAGAGCTTTGGATATATGCAATTCTGCAAAATAAATCAAAAGGAGTCAGAAGGCAATTTTAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTCCTAATAGACCCTTAGTTAGAATTTAACTTAAAAGCCATTTTTAACAAATGTAAACAATATCTCCCCTCCTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCATCAAAGTCTGACGGAGACAAATGAAAAGATTTTTTAGAAGAATAGGACTATATCAAGACCAAAAAAAAAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAAAAAGCTAAGAAAGGGTACCATCAACAATCTTTACAGAACTTCTGGAAAGTAAAAAGCAAATGGTACTGGCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGGGAATAACCAAAGAAAATGAAACCTCAGCCCCGGATGGCAAAGGACACAACTGGAGAAACTAGTTATTTCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCAAGGCTTTGACTGGAATGGCATGCTTCTTTAAAGAATCAAAGTTGACTTGTAGAGCCAATAAAAGCCCCTTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGAAATGTGGCCTCATACCTTGTCTATGCCATCTCTGTACAAGATTCCCGACTTGTGATTTCATAGTGTTTACT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GATGGACCATGTACTTGGGATAAATTGGCCAACTGAAGGTTTCTTATGCTGTGGTGTCTGATCATGAGCTCTTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAAGCTTATGTTTTGTCTGGAATTAAGTTGGCACAAGTAGACATCCTGAGACATAAAGTGAAAAGGACCTAGAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGAACTACTGGAAGAAATATCACCCCTATTAAACTGGGCAATTTTGTTTAAATATGAGTGTTCTGGAGGAAACA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGCATTGTCACCAGGCTGGATGGGACCCTTTCAAGTGCCACGATCACTCATATGGGTATCAGAGTGAAAGAAAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACCAGATGGTTTCATGCTTTCCATGTGAAGCCAGCTCCTCAGGAGGACTAGACTGCAGTTTCCACAAAGGATTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAAGTTTAATTTCCTAGAGTGACTAATATTGGTAATGAACTCAACTGAAAGGAGGTATTCTAAGGAATGTATTA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTCTGACTACCTTGCTGTCCTAGTTGCAATAGTGTTTTGTTCAATTACTATAAGAATCACATTTTATTAGAAAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TAAACATGTTATTTGTTACACCACTTTTTCTTTCTGTACTCCCAATAATGGTTCCTACAGTCACATTTCCTCTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCCTCTGAATTGTATTCCCAGTACAGAAATGCTGGGCCTGCATTTATGAATCCAACAGTCTGATTATTGGCCAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATAAACACAAGACCATGTTCATTACTATGTTTTAATATCAAAGTAAAAGTAACTACTATGCATCCAGAAACCAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGCCCTAAATTTCACACAAAAAAATTTGTTAACTGGTTTGATTGGAAGTATAGTATAGAAAAGAAATGCATCTA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATTAAGTGTCTGGCATTTATGGATAGAGACCTCAGAAGACAGCTCTAATGTCAATCGATTAACTTGAGAATAGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGTTTTCTCCAGTCCTACTATGGATAGATAAACAAAGGTGGATATGCCTGTTATCTATGGTTATTTAGTTAACT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTTATAATAATATAACTACTGGTTTGGACCGAGGTAAGAAATGGCCCAAAAGTTGGCTTTGTCCTCCAGACTTA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AAACTATTAGAGCCATGTACACTAAACACTGGAAATTCAATCTGTGCCCTTCAACGGGTACTTCATAATAAGAC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTTGATACTATATAATGGCCACGAGTGTCTTTGCATTTTGCATCTGGGAGAAATTATTTGGGAAGATGGGATAA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTACCAAAAGGCCTAGTTTATCCTATAAATGCAATATTACTCCTGTGACTGCTGAGAACTCAGAGGAAATTCAT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGGGCCTTACAAGAAAAACTCAGTTAAAAAACATATATTATCAGGCTCCAGAGTTAAGCTATTAACTCGGCTAG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GATAGGGATTTCTTTCTTTTTTGTTTGTTTGTTTGTTTTCTGAAGATGGATTCTCACTCAATAGCCCAGGCTGG 1998
Query 1 -ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCC 73
.||||||||.||.||||||||||||||||||||||..||||..||||||||.|||||||.|||||||||||||
Sbjct 1999 AGTGCAGTGGTGCGATCTCAGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCGGCCTCC 2072
Query 74 TGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAA--CTAATTTTTGTATTTTTAGGAGAGACGGGGTTT 145
||||||||||||||||.||||.|||.|||| |||.|.| .||||||||||||||||||.||||||.||||||
Sbjct 2073 TGAGTAGCTGGGATTATAGGCATGTTCCAC--CACGCCAGGTTAATTTTTGTATTTTTAGTAGAGACAGGGTTT 2144
Query 146 CACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--------------------------------- 186
||||.||||||.||||||||||||.||||||||||||||.|
Sbjct 2145 CACCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTCATGATCCGCTGGCCTCAGCTTCCCAAAGTGCTGGGA 2218
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2219 TTACAGGCGTGAGCCACTGTGCCTGGCCAGATTTCATTTTCTAAAACTACAAAATAATACTCAAGTAGTTAATC 2292
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2293 ATTTGAAAGCAGAAACAAAGACATGACAACAGTTTATAAAATTAATGTATCATGAGGATAATTTTTGTGTATGG 2366
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2367 CTAATCAAATATCTGCTTTAACCATTCACAACTGGTATATTTAAAGATTCCCCCAAGAAAAATATTGTACTAAT 2440
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2441 TTTTGATTCATCCCATTATAATTCTGATAATTGCTTTATTTTGTATTTTACCATGGACTTGCTGGATATAAATA 2514
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2515 TCTAAAGACTGCTGCAAACTGCCCAGAGAAAGGTTAAAATGTCAGAGTAAACAATTGGAAAACTGTAGTTTTAG 2588
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2589 TAGAAAATAGTAACAAGGAAAATTGTAAGGGTAAATACAAATCTAAAAATGAATTTTAATTTAAAATTTTCCTC 2662
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2663 AGTGCAAAAAGGAAAGAACTATTCCCCCTCCCTTTTCTTTCAGCATTTCCTTCAGAAAATGGAATTATAAATAA 2736
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2737 ACTTCTTGCCAGTTTTGCATCCTAGGAATGTCATTCTTTTTTTTTCTTTTATTATTATACTTTAAGTTTTAGGG 2810
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2811 TACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCACGCTGGTGCGCTGCACCCACTAACTCG 2884
Query 187 -------------------------------------------- 186
Sbjct 2885 TCATCTAGCATTAGGTATATTTCCCAATGCTATCCCTCCCCCCT 2928
