Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15487
- Subject:
- XR_938573.3
- Aligned Length:
- 2799
- Identities:
- 163
- Gaps:
- 2615
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGGAGGTCCGGGGCGCCGGACCCGCCGCGGCCTCGCCGGGCCTGGCTGGCCTGTTTGTTCTATACTTCTAATGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTAATAATTACCCAGAGCTTTGGATATATGCAATTCTGCAAAATAAATCAAAAGGAGTCAGAAGGCAATTTTAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTCCTAATAGACCCTTAGTTAGAATTTAACTTAAAAGCCATTTTTAACAAATGTAAACAATATCTCCCCTCCTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCATCAAAGTCTGACGGAGACAAATGAAAAGATTTTTTAGAAGAATAGGACTATATCAAGACCAAAAAAAAAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAAAAAGCTAAGAAAGGGTACCATCAACAATCTTTACAGAACTTCTGGAAAGTAAAAAGCAAATGGTACTGGCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGGGAATAACCAAAGAAAATGAAACCTCAGCCCCGGATGGCAAAGGACACAACTGGAGAAACTAGTTATTTCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCAAGGCTTTGACTGGAATGGCATGCTTCTTTAAAGAATCAAAGTTGACTTGTAGAGCCAATAAAAGCCCCTTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGAAATGTGGCCTCATACCTTGTCTATGCCATCTCTGTACAAGATTCCCGACTTGTGACATCCTGAGACATAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTGAAAAGGACCTAGAAGGAACTACTGGAAGAAATATCACCCCTATTAAACTGGGCAATTTTGTTTAAATATGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTGTTCTGGAGGAAACATGCATTGTCACCAGGCTGGATGGGACCCTTTCAAGTGCCACGATCACTCATATGGGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATCAGAGTGAAAGAAAAACCAGATGGTTTCATGCTTTCCATGTGAAGCCAGCTCCTCAGGAGGACTAGACTGCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTTTCCACAAAGGATTTGAAGTTTAATTTCCTAGAGTGACTAATATTGGTAATGAACTCAACTGAAAGGAGGTA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTCTAAGGAATGTATTATTCTGACTACCTTGCTGTCCTAGTTGCAATAGTGTTTTGTTCAATTACTATAAGAAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CACATTTTATTAGAAAATAAACATGTTATTTGTTACACCACTTTTTCTTTCTGTACTCCCAATAATGGTTCCTA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAGTCACATTTCCTCTCTCCTCTGAATTGTATTCCCAGTACAGAAATGCTGGGCCTGCATTTATGAATCCAACA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTCTGATTATTGGCCAAATAAACACAAGACCATGTTCATTACTATGTTTTAATATCAAAGTAAAAGTAACTACT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATGCATCCAGAAACCAAAGCCCTAAATTTCACACAAAAAAATTTGTTAACTGGTTTGATTGGAAGTATAGTATA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GAAAAGAAATGCATCTAATTAAGTGTCTGGCATTTATGGATAGAGACCTCAGAAGACAGCTCTAATGTCAATCG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATTAACTTGAGAATAGAAGTTTTCTCCAGTCCTACTATGGATAGATAAACAAAGGTGGATATGCCTGTTATCTA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGGTTATTTAGTTAACTGTTATAATAATATAACTACTGGTTTGGACCGAGGTAAGAAATGGCCCAAAAGTTGGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTTGTCCTCCAGACTTAAAACTATTAGAGCCATGTACACTAAACACTGGAAATTCAATCTGTGCCCTTCAACGG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTACTTCATAATAAGACTTTGATACTATATAATGGCCACGAGTGTCTTTGCATTTTGCATCTGGGAGAAATTAT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTGGGAAGATGGGATAATTACCAAAAGGCCTAGTTTATCCTATAAATGCAATATTACTCCTGTGACTGCTGAGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ACTCAGAGGAAATTCATTGGGCCTTACAAGAAAAACTCAGTTAAAAAACATATATTATCAGGCTCCAGAGTTAA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GCTATTAACTCGGCTAGGATAGGGATTTCTTTCTTTTTTGTTTGTTTGTTTGTTTTCTGAAGATGGATTCTCAC 1850
Query 1 ------------------ATGCAGTGGCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATT 56
.||||||||.||.||||||||||||||||||||||..||||..||||||||.||||
Sbjct 1851 TCAATAGCCCAGGCTGGAGTGCAGTGGTGCGATCTCAGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGTGATT 1924
Query 57 CTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACACTCAA--CTAATTTTTGTATTTT 128
|||.|||||||||||||||||||||||||||||.||||.|||.|||| |||.|.| .|||||||||||||||
Sbjct 1925 CTCCTGCCTCGGCCTCCTGAGTAGCTGGGATTATAGGCATGTTCCAC--CACGCCAGGTTAATTTTTGTATTTT 1996
Query 129 TAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---------------- 186
|||.||||||.||||||||||.||||||.||||||||||||.||||||||||||||.|
Sbjct 1997 TAGTAGAGACAGGGTTTCACCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTCATGATCCGCTGGCCTCAGC 2070
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2071 TTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGTGCCTGGCCAGATTTCATTTTCTAAAACTACAAAATAA 2144
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2145 TACTCAAGTAGTTAATCATTTGAAAGCAGAAACAAAGACATGACAACAGTTTATAAAATTAATGTATCATGAGG 2218
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2219 ATAATTTTTGTGTATGGCTAATCAAATATCTGCTTTAACCATTCACAACTGGTATATTTAAAGATTCCCCCAAG 2292
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2293 AAAAATATTGTACTAATTTTTGATTCATCCCATTATAATTCTGATAATTGCTTTATTTTGTATTTTACCATGGA 2366
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2367 CTTGCTGGATATAAATATCTAAAGACTGCTGCAAACTGCCCAGAGAAAGGTTAAAATGTCAGAGTAAACAATTG 2440
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2441 GAAAACTGTAGTTTTAGTAGAAAATAGTAACAAGGAAAATTGTAAGGGTAAATACAAATCTAAAAATGAATTTT 2514
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2515 AATTTAAAATTTTCCTCAGTGCAAAAAGGAAAGAACTATTCCCCCTCCCTTTTCTTTCAGCATTTCCTTCAGAA 2588
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2589 AATGGAATTATAAATAAACTTCTTGCCAGTTTTGCATCCTAGGAATGTCATTCTTTTTTTTTCTTTTATTATTA 2662
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2663 TACTTTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCACGCTGGTGCG 2736
Query 187 ------------------------------------------------------------- 186
Sbjct 2737 CTGCACCCACTAACTCGTCATCTAGCATTAGGTATATTTCCCAATGCTATCCCTCCCCCCT 2797
