Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15487
- Subject:
- XR_942832.2
- Aligned Length:
- 3669
- Identities:
- 156
- Gaps:
- 3492
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTTATTATCTTCAGAGATTAAGGCAGTATTTTCTGAGCAGATTTAACAAAAATGATCTTGCCTAATTAAAAGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCACTGGGTAGTGTTCGTCAGAGAGCCCGGCTGCTGGCTGTTATTTCCTGTGTCAAACTTCCTCTTACCCCTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGTTTGTACATGAGACAGTTAGAGGGGCCGTGTCTCAGCTCTGCCACCCACGTCTCAGCCCACTCGCACTCGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGGACAGAATGTTAAAGAAAACTCAGAACATAAATCTGGGTGGGGAGAGCTAAGAACTCTACATTATGTTCTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCTCGTTTCTTTTTTTATAGCTCATCATAACCTATGCCTATTTTTCCCTTTGAATCTTTCATAGATTCCAGTCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TAGGCCAGATTCAAGACTCAACCCCAATTATTGGGTATAAGAGACACAATAGGTATTCAATAAACATCGGTTGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATTGAATTAAATGGGATTGAAATTGGCCCCACTAAGACATAGATCTCTTAGGGGTTGTTTGGCTGCAAAAACCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAAATCTAGATGACTAGCTAAAGCTAAACAAGAAAATTTACTGTAAGGATACATGGATTTCTTTATGAGAAAAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCAAAAGGAAGTGGAAACTTACCAGGAATGAAAGAGAATGCTGTTTATAATTTTTAGGGAGCATTGAGGTCAAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GATCTGCCTCACTATCCTTCCACCTTTGGCTCTGCTTGCAGTGGCTCTGGTTCTATCCATGCTTTTACTAAGCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGCAAATTCTGTAAAGCAGGAAACTACAAAAACGTTACAAAAGGCTCTGTCAAAAGATTCTTCAAGTGATTAAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GATAGCACACTCTGCATAGGAAATGAAGCCCTCGGAGAGATTTGAAGAAGCCCTTGGAGAGATTTGAGATATCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTAACGGAGAAAGAATTGACCTTCATTATCTCAGGAAGGCTTTTGACATAAAAGAGAAAGAGAAGAAACTGATT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACTTAAAGAGGAGAGAGAGCTGTAAAGAGAACTACGAGGATGAGCATCAGGCTTAAAGTGGCTTAATTTATAAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CGGATAATTTAAAAATAGAATTGGAACATTAAGCCTTAATATGACCTATACTCCTCGCAATCCAGAAGTGAAGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GAGAAATGTGGACATGAGAGGGGCACAGAGGAAGACTACCTGAAGACACACAGAGAGAAGGTGACCACGTGGTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGAGTGGAGCATCTACAAACCAACACACATACCAAGGATTGCTGGCAAGTATCACCAGAAGCTAGAAGAGGCAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GAAAGGATTCTCCCCAAAGCTGTCAGCAAAAACACAGCACTGATGGTACCTTGATTTCAGACTTTTAGCCCCGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AACTGTGAGAGAGTAAATTTCTGTTGTTTTAGGTGACCTGTTTTTTGGAATTTGTTATGTCAACTGTAGGAAAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGATATTGTACAACGATTGGGGCATGACTTTGCAATGGTTTACCTGCTCTCAGATGAAAATTTTTTTTTTTTGT 1480
Query 1 -----------------------------------------ATGCAGTGGCGCCATCTCAGCTCACTGCAACCT 33
.||.|||||.|||||||..||||||||||||||
Sbjct 1481 TTTTTTTTTAGATGGAGTCTTGCTCTGTTGCCCAGGCCAGAGTGTAGTGGTGCCATCTTGGCTCACTGCAACCT 1554
Query 34 CCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCACTACA 107
|.|.|||||.||||||||||||||||.||||||.||||||.||||||||||||..|||| |||..||
Sbjct 1555 CTACCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACCACAG--------CACACCA 1620
Query 108 CTCA--ACT----AATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTGGTCTCGAACTC 175
| || .|| |||||||||||||||||.|||||..||||||||||.|||||||||||||||||||.|||||
Sbjct 1621 C-CAGGCCTGGTGAATTTTTGTATTTTTAGTAGAGAAAGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTC 1693
Query 176 CTGACCTCAAG--------------------------------------------------------------- 186
|||||||||||
Sbjct 1694 CTGACCTCAAGTGATCTGCTCGCCTCAGCTTCCCAAAGTGCTGGGATTACAGGTGTGGGCCACCACACCCTGTC 1767
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1768 TCAGATGAAAGGTTAATATAATTAAGGAACATCTTTTTTGTTTTTTTTTTCAGAAATTGGAATGGGGGAGTAGC 1841
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1842 TGAACAGAAAAGTCCATCTTGTTCAATTCCCACAAGAACATTTCTTTGCAATATTATTGGCAGGAATATGCAGT 1915
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1916 AAAGTTCTAATAACTATTTACTCCTTTCTTTGAAACTCTATTCAGTTATAATGTGTCCTGTAAAAAGTATGACA 1989
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1990 CTGATTTCATAGTACCAATTTTAGCCTAATACATATTTAAATGATTCCCAATGTATAAAGATATTTTAGTAATA 2063
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2064 AGAAATTATTTAAGGATCCCAAACATCACAATAAACATAAAGCCTAGTTTTAGGTTGCAAAAAAGTATCAAACT 2137
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2138 TTATAAGTTTTAGTGCAAATTAAGAGAAATTACATTCTAACTACACTAATAACTGAAAACTTCATATTAGGCAA 2211
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2212 ATAATGTCTTCAACTACTCAAATTATAGGAGCCCACTTCAAGAACCTCAGTAAGAAGAAATTTTGAATGGTTTA 2285
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2286 AAAATAATAAATGCCATGACATTTTAAATGGAAATTTGGCATATTTTTGAGATAAATATGATTGGATACATGTG 2359
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2360 TGTGCCATTCTTTTATCTCTTCTTACTTTTACTGTATCTCTACTTTAATGATGACAATAATATGGCTACAGACA 2433
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2434 TGAAATGGTTTATCTTTCTTCTTTTCTTTCACTCTTTCATTTAAAGCATTTATATTATTTTTTATTGATGTCAA 2507
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2508 TGTTAACATTTTGGCATCCTTCCCAAGTATATTGCAAGAAATACATCAATAAAAACTTAAATTTAAAAAATATG 2581
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2582 TAGTCTGGGGCCAGATAATAATGGCATATTTCTTTAAAATTAGGTATAAAGGAGTACAGACGAGGTCAAAATTC 2655
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2656 TAAAATTGGAATCTTGCCATTAACAAACAGAACTGACATTCTGATACTTCTATCTGCTGTGGACGTGACACAGA 2729
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2730 GACTTACCAAAGCCAAGATACATTTATTCAAGGAGGAGCAACTTGCCTTTATACTTATACCTTTGTTAATAACT 2803
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2804 TGTTTAAAGCAATCCTTTGTTTTCTTTGCATATTTGAATTGATTTGCTAAAAGTTATCTACTGTTAAATAAGCA 2877
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2878 AAACTCAAAATTTTCAAGCATATGGGACTTGTTCAGAATCAGTTTTTAGTTTCTTTTTCAGGATTTTGTACAAG 2951
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2952 TTGCAAGAGAAGAGACACAAAATTATCTTATTAATTCTATTGCAATATGGAGATACATTTTAAACAAATGGAAA 3025
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3026 TAATCAATATTAGTATTATCTGTATATTTGTGTGTGTGTGTGTTGATCTGACTATATTTTTCTTCAAAGGGAAA 3099
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3100 TCACAAAGGCCAAGTGTGTTTATCAGGTAACTCACCTTAAGAAAACTTGTACTATGTGAAAAGTCAATTTCTTT 3173
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3174 AAAAACTGTCACCAACTCAACCCTGGTTTGTAAGTAGAAAAAACTATCAATTATTTTTTAACAATAGTAATACT 3247
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3248 CCCAAGGTATATACTTCTGCCACAAAAAATTAAGAATAGTTTACTTAGCACGTTTTGTCATTGTGGAAATCATT 3321
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3322 GAGAAAAATCACAGTGGAAAGTTATTTGAAAAGGCATAACTGTCATTAGAAAGAAATTAAGAATAAAGAAGGCA 3395
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3396 GGCCTGGCGTGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGTGGATCTCCTGAGGTCGG 3469
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3470 GAGTTCAAGACCAGCCTGACTAACATGGAGAAACCCCATCTCTACTAAAAATACAAAATTAGCCGGGGTGGTGG 3543
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3544 CACATGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAGATGGAGGTTGCG 3617
Query 187 ------------------------------------------- 186
Sbjct 3618 GTGAGCTGAGATGGTGCCATTGCACTCCAGCCTGGGCAAAAAG 3660
