Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15487
- Subject:
- XR_946659.3
- Aligned Length:
- 4869
- Identities:
- 162
- Gaps:
- 4683
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AATTGGTACCAGGAGAGCCCAGAAGCCACACACGCATCTCTGCCTCTTTGCTCTGGCTCTCCCACCCTCTTCCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTCTTTCTCTGCTTCCTTGTCACTGTTACTCCAGGAGACGTTCACTTTTCACCAACCTTTCTCCAAGCATCTCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGCCACTGACTATATATATTTTGCTACAAGAGACCTAGAAGAGGAAAAAAGGCACGAGACTTTTCAACACATC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTTTAAAAAAATCATCAACGAATTTCTTGCAATGTTTGAGAACAATTAAAAGGAAAAAGCGTTTTTTAAAAAAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTATCAACTAAGTGAACAATCATTCATATCGTCTACATCCTGAGATATTATTGTCCCTCGCTGCGGACACCAGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAGATGACAGCTGCTTTTTCATTTTTGAATGTAATAAATATTTGCTGCTTTTAATATTTTCCGGAATCTCCCCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGCTATTCCTTGGAATTTTAACTCTAAAGATTGGAGAACAGATTATCAAAAAGGCTTTTGCAAGCCTCCAAAAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GATGCTGAGTCCGGACCAAGCAGCAGATTCGGACCATCCCAGCTCGGCGCACTCGGATCCGGAGTCCCTGGGCG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCACGGACACCAAGGTGCTCGGCAGCGTGTCGGACCTGGAGCCGGTGGAGGAGGCCGAGGGCGACGGCAAGGGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGCAGCCGAGCCGCGCTCTACCCGCACCCGCAGCAGCTGAGCCGCGAGGAGAAGCGCCGCCGCCGGCGCGCCAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGCCAAGTACCGCTCGGCCCACGCCACCCGCGAGCGCATCCGCGTGGAAGCCTTCAACTTGGCCTTCGCCGAGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCCGCAAATTGCTGCCCACGCTGCCCCCGGACAAGAAGCTCTCCAAGATCGAGATCCTGCGCCTGGCCATCTGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TACATCTCCTATCTCAACCACGTCCTGGACGTGTAGGGCGGGGTGCGCCGCGGGGGGCCGCCTGTCCCGGCGTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CGCGAAACGCTACGGATCCGGACGGGCGCCGTCGCTCGGGTGGCGGAGGCTGCGGTGGCCCAGCGAGACGGCCG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCTCGAGAGACGGCCGGGGAAGAAGCTCGCTACCTGTTCTCTCTGGTCAGCAGGGCGACGAGGGAAGGTTTCCG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACGCAGGCAGGAGAGGATCTTTGCAATGTCATTTCAAATCCAAAGCTGCTGAGCACCCTCCAAGAGAGACAAGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATGGTGGCAGTCTGCTAGACCAGAGGGTGACTGGCTCATTCCCTGAGCACAGCGCAGACACAGTGATTATTCGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCATCCATGAGGTCTCGATTCTTCTTTGAATGACGATGCCACTCAACAACTTGCCAGGCCATTGCTGCTCCCCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAAAGCCTAGCCCCAGCTGGCCCAGCGGACAAGACTGCCTGTGCTGAATATTTCTCCACCCAAATGGACTTCCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTCACTTCTACCACTGCCCGGAAACTTCCAGAGAACAAGGGTAAAAGTATTGGGCAAAACAACCTTCCTCTCCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGGAGAGGGGAAGAGGAGGGGCAGTGTATGATGGGATGGGATGGTAAAGGAAGGGCCGACTGAGGAGAGAGGAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGGGTAAGGAGGAAATGAGACTGGGTGGGAGTGGGGGACTCTGGAGGGAATACCCGCTTCCCACAGGAATGCTG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTTGCAGGAGCTCCCTCCAGTGGCCCTGCCCCATGAACACGTATCACCAGAGCACTATGATAAGGCGAGTAGCC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGAGCCAGCCTCTGTGATGCTGTGATTTATCCAACTCTCCTCACTGCTGTCTCTGGCTACCAGTTTTCTTGCTG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ATGTTTGGGGTGGAGAGAATTTAAGGGGAGAAGAGGGCCAACTTAAGAGCATGCACAGCCAATACCCTTTTCCA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TATTTAGATGTGCTATCTCATTTATCAGTATTAGTAGTCGAAATAATAGCTAATGTGGGTTGAGTGTATACTAC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATGCTTACTAAAGTGCTTTGCATGCATTATCTCCTGTAATTCTCACAACCACCCAGTGAGGTAGGTACTTTTAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGTCTCCATTTAACAGATGAGGAATTTGAGGCTTAAAGAAATTAGATGACTTGCTTAGGGCCATGAAGCCATGT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTATCAGTTTATCAAAGTGCCTGCCCCTACCCATCATCCTCTAGAGTTGTCCTTTGATAGAGGGGTAGCTGTGC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CACTCACACACCACCCCCCTTGGTGCCTGCACTGCATCTTTCCATCCATGTGCCTAGGGAAAGCTTCAGCTCAT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GTAATGCCTAAGGAGTGCTGCGTCTGCAGTACACACAGCTGCCCAACCAATGGGACCAGTGGAGGCCAAAACCA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGCCTGTGCTCTGTATGCCAAGTCAAGCATGTGCCTTGGCTTGAAGTTGGACTACCTGGAGGAAGGGGAGCATT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TTTCTACTTTGCAAGAAAACACTATAGGATAATGGTGGCCCTGTGACAACTCCCCCACCAGGGCACCGTCATTC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ACTACCACATGGGTGAGGCTGGCTCCATCCACACTCCTCTGCACCTTCCAGCCCATTCTCACGCTGCTTCTAGA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CCTATCTTTAAAAATTAGCGTGCCATCCTCCTTCGTGAATGTCCATTTTATTTTTTAATAAAATTCAAGTTCCC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AATCTAGGCATAGAAATGTTTCACAGTCTTGTTCCAGACCCTCACTAGTGCCATTTTCAGCCACTCTCCAGAGA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTAAATATTCCTGCAAACTCGGTTTCCTCACTTCCCCAGAGAGGCCAAGTCTTTTTCTTTTACGACCTGGGCCT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTGTATTTACTTCCCCTTTACTCACAATGCTCTCCCCTAACCTCATTTTTTACCCAGAAAATTCCGATGATTCC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ACTGTGACCCAACTCAGACCACACGTAACCACACGTATCATTACAAAGCTTTCCGTTTCTTTCAGAAGCATTAG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CTGCTCTGTTCTCTGAGTCCCACATACATACATCGTTTTAACTGAATTTACCTGTTTCTCCCATCTCTGTGTTT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GAGACCCAAGACTCTGGAGCCAAGTTCGGGCCCTGGCTCCAATTATTCTAAGTGTATGACATTGAACATGTTAC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TATATCTCCTCAAGCCTCCATTTTCATCCATAAGATGGGACAACGTATGTACCAATCTCAAATGCATGTCATGA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GGTTTCCATGGGATAATGTATAGTGCTTATCAGAATAGGAATACATGGGAAGTGCTCAATAAATGTGAGCTATT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TTCATTACCTTTGTATTTATAATATGCACAGGAATTAACATAGGATAAGCTAAAATCAGCTTTAATTCTTTAAT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 ATAGTAATGATTTGTGGTTTCCACCAACTATATCCATCTGCATATGATACATTACTAACTCAACAGTCAGCCAG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 AAATCATCCCCATCTTCTAAGACAGGAAGCATAGGTAAATTAATAGTCATCCATGGAATACACCACACATGCAC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 ACCTGTAGAGTTATCTACAGGTCTGAAAGCCCCACTCGACTCATGATAAAGGCCCAGTCTATGCCTTTTCTCTT 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TTACCTTGGTTTTTCCCATAGCACGAATGCTGTGATAAGCACTATAGCAGACTGGTCAGAAGCACAGACTCTGT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CAAAGCTAATTTTTAAAGATAGGTCTAGAAGCAGAGGGCCAGTTTTCAGGCCTGCTCACCCATGATAGGTCAGG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 CAGAGGGGGATGAGCGGGCACTCACATCCAATGTGTGTGTACGAGCAATTGCCAAAGTTAAGGACGACAAGGGG 3700
Query 1 ---------------------------------------------------------ATGCAGTGGCGCCATCT 17
.|||||||||||.||||
Sbjct 3701 TAAATTTTTTTTTTTTTTTTTGAGACCAAGTCTCGCTCTGTGGCCCAGGCTGCAGTGGTGCAGTGGCGCAATCT 3774
Query 18 CAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTACA 91
..|||||||||||||||||.||||||||||||.||.|||||..||.|||.||||||.|||||||||||||||||
Sbjct 3775 TGGCTCACTGCAACCTCCACCTCCCAGGTTCAGGCAATTCTTCTGGCTCAGCCTCCCGAGTAGCTGGGATTACA 3848
Query 92 GGCGTGTGCCACTACACTCAACTAA-TTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGGCCAGGCTG 164
|||.|||.||||.|..|.||.|||| |||||||||||||.|.|||||||||||||||||.||||||||||||||
Sbjct 3849 GGCATGTACCACCATGCCCAGCTAATTTTTTGTATTTTTTGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTG 3922
Query 165 GTCTCGAACTCCTGACCTCAAG---------------------------------------------------- 186
||||.|||||||||||||||.|
Sbjct 3923 GTCTTGAACTCCTGACCTCAGGTGATCCGCCCCCCCCTAGGCCTTTCAAAGTGCTGGGATTACAGGCGTGAGCC 3996
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3997 ACCGCGCCCAGCCAGACAAGGGGTACATTTTTAAGATAGAAGGAAAAGTCATCAGGGAAGGTGGGTTAGATCAG 4070
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4071 CTGTGAAAGTCCCCTCAAATATGCAAGTGCTCACAGATGATTTTCAGGAAATACTGTTCGTTTTACTGTGATAA 4144
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4145 TGGTATATTTGTTGTTAAAAGAAAAAAGAGTCCTTATCTTTTAAGAGATACTTACTGATGTCTTCATGGATGAA 4218
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4219 ATGATGTGATGTTTGGGATTTGCTTCAAAAAGTCTTAAGGGGTAGTGAGAAAGACAGGATAAGAAAATAAATGA 4292
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4293 AATGTACTTATTGGTGTTGTGTATATTTGAATCCATTTCACTATTCTCTTGGCTTTTGGAGATGTTTTAACAGT 4366
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4367 TTTCCATAAGAGCGTTTTTTAAAATGTAGTTGCTCAGAAAATTTGTGCCAGTTGATTTTTACTCACCAGGAAGT 4440
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4441 CGACTCCCGCTTAAACTAAGGCCACCACCCTCTTTCACAGAGCTCCACCCTTTAGCACAAGTCACCTCATGCCA 4514
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4515 CTCAGAGAACCATCTCCAGCCCTGGTTACTTTTTGTGAATGCACCAGGTATTGCTCCACAGAGTCATCTCTGGA 4588
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4589 GAAAGTTTTTTTCTTTGTCTTTGGTCAATGATCCTCTGTCCCTCTTGGCAGACTGACTCCAGTGGCCTTTTATT 4662
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4663 TTCAGTTATTCCATCCTAACCCCAGGGAATCCTAAGAGGACCCGCCCCCATATACATATCTACCAATCACACCA 4736
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4737 CCTTTCTCCTGATTCAAGAAGCCCCTGAAATCTTCCCTTTTTCTGATATATTGCTGGAATGATCAGCAAGGAGA 4810
Query 187 ----------------------------------------------------------- 186
Sbjct 4811 TGAAGAACTCCCTCCTGACCTGGAAATACTTACTGAAATGAAGCAGGAAATTCCAACAA 4869
