Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15538
- Subject:
- NM_001320707.1
- Aligned Length:
- 2808
- Identities:
- 180
- Gaps:
- 2628
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGTCCAACCCCGAACGGGGGGAGATTCTGCTCACGGAACTGCAGGGGGATTCCCGAAGTCTTCCGTTTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGAGAATGTGAGTGCTGTTCAAAAATTAGACTTTTCAGATACAATGGTGCAGCAGAAATTGGATGATATCAAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATCGAATTAAGAGAGAAATAAGGAAAGAACTGAAAATCAAAGAAGGAGCTGAAAATCTGAGGAAAGTCACAACA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GATAAAAAAAGTTTGGCTTATGTAGACAACATTTTGAAAAAATCAAATAAAAAATTAGAAGAACTACATCACAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTGCAGGAATTAAATGCACATATTGTTGTATCAGATCCAGAAGATATTACAGATTGCCCAAGGACTCCAGATA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCCAAATAATGACCCTCGTTGTTCTACTAGCAACAATAGATTGAAGGCCTTACAAAAACAATTGGATATAGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTTAAAGTAAAACAAGGTGCAGAGAATATGATACAGATGTATTCAAATGGATCTTCAAAGGATCGGAAACTCCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGGTACAGCTCAGCAACTGCTCCAGGACAGCAAGACAAAAATAGAAGTCATACGAATGCAGATTCTTCAGGCAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCCAGACTAATGAATTGGCTTTTGATAATGCAAAACCTGTGATAAGTCCTCTTGAACTTCGGATGGAAGAATTA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGGCATCATTTTAGGATAGAGTTTGCAGTAGCAGAAGGTGCAAAGAATGTAATGAAATTACTTGGCTCAGGAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGTAACAGACAGAAAAGCACTTTCAGAAGCTCAAGCAAGATTTAATGAATCAAGTCAGAAGTTGGACCTTTTAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGTATTCATTAGAGCAAAGATTAAACGAAGTCCCCAAGAATCATCCCAAAAGCAGGATTATTATTGAAGAACTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCACTTGTTGCTGCATCACCAACACTAAGTCCACGTCAAAGTATGATATCTACGCAAAATCAATATAGTACACT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ATCCAAACCAGCAGCACTAACAGGTACTTTGGAAGTTCGTCTTATGGGCTGCCAAGATATCCTAGAGAATGTCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTGGACGGTCAAAAGCAACATCAGTTGCACTGCCTGGTTGGAGTCCAAGTGAAACCAGATCATCTTTCATGAGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGAACGAGTAAAAGTAAAAGCGGAAGTAGTCGAAATCTTCTAAAAACCGATGACTTGTCCAATGATGTCTGTGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGTTTTGAAGCTCGATAATACTGTGGTTGGCCAAACTAGCTGGAAACCCATTTCCAATCAGTCATGGGACCAGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGTTTACACTGGAACTGGACAGGGTTACCTTTTTTAATCCAGTTATTGAAAGAAGACCAAAACTTCAAAGACAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AAGAAAATTTTTTCAAAGCAACAAGGCAAAACATTTCTCAGAGCTCCTCAAATGAATATTAATATTGCCACTTG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGGAAGGCTAGTAAGAAGAGCTATTCCTACAGTAAATCATTCTGGCACCTTCAGCCCTCAAGCTCCTGTGCCTA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTACAGTGCCAGTGGTTGATGTACGCATCCCTCAACTAGCACCTCCAGCTAGTGATTCTACAGTAACCAAATTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GACTTTGATCTTGAGCCTGAACCTCCTCCAGCCCCACCACGAGCTTCTTCTCTTGGAGAAATAGATGAATCTTC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGAATTAAGAGTTTTGGATATACCAGGACAGGATTCAGAGACTGTTTTTGATATTCAGAATGACAGAAATAGTA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TACTTCCAAAATCTCAATCTGAATACAAGCCTGATACTCCTCAGTCAGGCCTAGAATATAGTGGTATTCAAGAA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTTGAGGACAGAAGATCTCAGCAAAGGTTTCAGTTTAATCTACAAGATTTCAGGTGTTGTGCTGTCTTGGGAAG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGGACATTTTGGAAAGGTGCTTTTAGCTGAATATAAAAACACAAATGAGATGTTTGCTATAAAAGCCTTAAAGA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AAGGAGATATTGTGGCTCGAGATGAAGTAGACAGCCTGATGTGTGAAAAAAGAATTTTTGAAACTGTGAATAGT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GTAAGGCATCCCTTTTTGGTGAACCTTTTTGCATGTTTCCAAACCAAAGAGCATGTTTGCTTTGTAATGGAATA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TGCTGCCGGTGGGGACCTAATGATGCACATTCATACTGATGTCTTTTCTGAACCAAGAGCTGTATTTTATGCTG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CTTGTGTAGTTCTTGGGTTGCAGTATTTACATGAACACAAAATTGTTTATAGAGATTTGAAATTGGATAACTTA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TTGCTAGATACAGAGGGCTTTGTGAAAATTGCTGATTTTGGTCTTTGCAAAGAAGGAATGGGATATGGAGATAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AACAAGCACATTTTGTGGCACTCCTGAATTTCTTGCCCCAGAAGTATTAACAGAAACTTCTTATACAAGGGCTG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TAGATTGGTGGGGCCTTGGCGTGCTTATATATGAAATGCTTGTTGGTGAGTCTCCCTTTCCTGGTGATGATGAA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GAGGAAGTTTTTGACAGTATTGTAAATGATGAAGTAAGGTATCCAAGGTTCTTATCTACAGAAGCCATTTCTAT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AATGAGAAGGCTGTTAAGAAGAAATCCTGAACGGCGCCTTGGGGCTAGCGAGAAAGATGCAGAGGATGTAAAAA 2590
Query 1 --------------------------------------ATGGACAAAAAAGTAAAGCCACCATTTATACCTACC 36
||||||||||||||||||||||||||||||||||||
Sbjct 2591 AGCACCCATTTTTCCGGCTAATTGATTGGAGCGCTCTGATGGACAAAAAAGTAAAGCCACCATTTATACCTACC 2664
Query 37 ATAAGAGGACGAGAAGATGTTAGTAATTTTGATGATGAATTTACCTCAGAAGCACCTATTCTGACTCCACCTCG 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 ATAAGAGGACGAGAAGATGTTAGTAATTTTGATGATGAATTTACCTCAGAAGCACCTATTCTGACTCCACCTCG 2738
Query 111 AGAACCAAGGATACTTTCGGAAGAGGAGCAGGAAATGTTCAGAGATTTTGACTACATTGCTGATTGGTGT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 AGAACCAAGGATACTTTCGGAAGAGGAGCAGGAAATGTTCAGAGATTTTGACTACATTGCTGATTGGTGT 2808
