Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15538
- Subject:
- NM_001320708.2
- Aligned Length:
- 2481
- Identities:
- 180
- Gaps:
- 2301
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGATACAGATGTATTCAAATGGATCTTCAAAGGATCGGAAACTCCATGGTACAGCTCAGCAACTGCTCCAGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGCAAGACAAAAATAGAAGTCATACGAATGCAGATTCTTCAGGCAGTCCAGACTAATGAATTGGCTTTTGATA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATGCAAAACCTGTGATAAGTCCTCTTGAACTTCGGATGGAAGAATTAAGGCATCATTTTAGGATAGAGTTTGCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTAGCAGAAGGTGCAAAGAATGTAATGAAATTACTTGGCTCAGGAAAAGTAACAGACAGAAAAGCACTTTCAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGCTCAAGCAAGATTTAATGAATCAAGTCAGAAGTTGGACCTTTTAAAGTATTCATTAGAGCAAAGATTAAACG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAGTCCCCAAGAATCATCCCAAAAGCAGGATTATTATTGAAGAACTTTCACTTGTTGCTGCATCACCAACACTA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGTCCACGTCAAAGTATGATATCTACGCAAAATCAATATAGTACACTATCCAAACCAGCAGCACTAACAGGTAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTTGGAAGTTCGTCTTATGGGCTGCCAAGATATCCTAGAGAATGTCCCTGGACGGTCAAAAGCAACATCAGTTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CACTGCCTGGTTGGAGTCCAAGTGAAACCAGATCATCTTTCATGAGCAGAACGAGTAAAAGTAAAAGCGGAAGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGTCGAAATCTTCTAAAAACCGATGACTTGTCCAATGATGTCTGTGCTGTTTTGAAGCTCGATAATACTGTGGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGGCCAAACTAGCTGGAAACCCATTTCCAATCAGTCATGGGACCAGAAGTTTACACTGGAACTGGACAGGTCAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTGAACTGGAAATTTCAGTTTATTGGCGTGATTGGCGGTCTCTGTGTGCTGTAAAATTTCTGAGGTTAGAAGAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTTTTAGACAACCAACGGCATGGCATGTGTCTCTATTTGGAACCACAGGGTACTTTATTTGCAGAGGTTACCTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTTTAATCCAGTTATTGAAAGAAGACCAAAACTTCAAAGACAAAAGAAAATTTTTTCAAAGCAACAAGGCAAAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CATTTCTCAGAGCTCCTCAAATGAATATTAATATTGCCACTTGGGGAAGGCTAGTAAGAAGAGCTATTCCTACA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTAAATCATTCTGGCACCTTCAGCCCTCAAGCTCCTGTGCCTACTACAGTGCCAGTGGTTGATGTACGCATCCC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCAACTAGCACCTCCAGCTAGTGATTCTACAGTAACCAAATTGGACTTTGATCTTGAGCCTGAACCTCCTCCAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCCCACCACGAGCTTCTTCTCTTGGAGAAATAGATGAATCTTCTGAATTAAGAGTTTTGGATATACCAGGACAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GATTCAGAGACTGTTTTTGATATTCAGAATGACAGAAATAGTATACTTCCAAAATCTCAATCTGAATACAAGCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGATACTCCTCAGTCAGGCCTAGAATATAGTGGTATTCAAGAACTTGAGGACAGAAGATCTCAGCAAAGGTTTC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGTTTAATCTACAAGATTTCAGGTGTTGTGCTGTCTTGGGAAGAGGACATTTTGGAAAGGTGCTTTTAGCTGAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TATAAAAACACAAATGAGATGTTTGCTATAAAAGCCTTAAAGAAAGGAGATATTGTGGCTCGAGATGAAGTAGA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CAGCCTGATGTGTGAAAAAAGAATTTTTGAAACTGTGAATAGTGTAAGGCATCCCTTTTTGGTGAACCTTTTTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CATGTTTCCAAACCAAAGAGCATGTTTGCTTTGTAATGGAATATGCTGCCGGTGGGGACCTAATGATGCACATT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CATACTGATGTCTTTTCTGAACCAAGAGCTGTATTTTATGCTGCTTGTGTAGTTCTTGGGTTGCAGTATTTACA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGAACACAAAATTGTTTATAGAGATTTGAAATTGGATAACTTATTGCTAGATACAGAGGGCTTTGTGAAAATTG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTGATTTTGGTCTTTGCAAAGAAGGAATGGGATATGGAGATAGAACAAGCACATTTTGTGGCACTCCTGAATTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTTGCCCCAGAAGTATTAACAGAAACTTCTTATACAAGGGCTGTAGATTGGTGGGGCCTTGGCGTGCTTATATA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TGAAATGCTTGTTGGTGAGTCTCCCTTTCCTGGTGATGATGAAGAGGAAGTTTTTGACAGTATTGTAAATGATG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AAGTAAGGTATCCAAGGTTCTTATCTACAGAAGCCATTTCTATAATGAGAAGGCTGTTAAGAAGAAATCCTGAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CGGCGCCTTGGGGCTAGCGAGAAAGATGCAGAGGATGTAAAAAAGCACCCATTTTTCCGGCTAATTGATTGGAG 2294
Query 1 -------ATGGACAAAAAAGTAAAGCCACCATTTATACCTACCATAAGAGGACGAGAAGATGTTAGTAATTTTG 67
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CGCTCTGATGGACAAAAAAGTAAAGCCACCATTTATACCTACCATAAGAGGACGAGAAGATGTTAGTAATTTTG 2368
Query 68 ATGATGAATTTACCTCAGAAGCACCTATTCTGACTCCACCTCGAGAACCAAGGATACTTTCGGAAGAGGAGCAG 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 ATGATGAATTTACCTCAGAAGCACCTATTCTGACTCCACCTCGAGAACCAAGGATACTTTCGGAAGAGGAGCAG 2442
Query 142 GAAATGTTCAGAGATTTTGACTACATTGCTGATTGGTGT 180
|||||||||||||||||||||||||||||||||||||||
Sbjct 2443 GAAATGTTCAGAGATTTTGACTACATTGCTGATTGGTGT 2481
