Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15538
- Subject:
- NM_178654.4
- Aligned Length:
- 2949
- Identities:
- 169
- Gaps:
- 2769
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGTCCAACCCCGACCGGGGGGAGATCCTCCTCACCGAGCTGCAGGGAGATTCCCGGACTCTTCCATTTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGAGAATGTGAGTGCTGTTCAGAAATTAGACTTTTCAGATACAATGGTGCAACAGAAATTGGACGACATCAAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATCGAATAAAGAGAGAAATAAGGAAAGAACTGAAAATCAAAGAAGGAGCTGAAAACCTGAGGAAAGTTACAACA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GATAAGAAAAATTTGGCTTATGTAGACAACATTTTGAAAAAATCAAATAAAAAATTAGAAGAATTACATCACAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTACAAGAATTAAATGCACACATCGTTGTATCGGATCCAGAGGACTCCACAGATTGTCCGAGGACTCCAGATA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCCAAATAGTGACTCTCGTAGTTCTACTAGCAACAATAGACTGATGGCCTTACAGAAACAACTGGATATAGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTTAAAGTAAAGCAGGGTGCAGAGAACATGATACAGATGTACTCAAATGGCTCTTCAAAGGATCGGAAACTCCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGGTACAGCGCAGCAACTGCTACAGGATAGCAAGACAAAAATAGAAGTCATCCGGATGCAGATTCTTCAGGCCG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCCAGACCAATGAGCTGGCTTTTGATAATGCAAAACCTGTGATAAGCCCTCTTGAGCTTCGGATGGAAGAATTA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGACATCATTTTAAGATAGAATTTGCAGTAGCCGAAGGTGCAAAGAATGTCATGAAGTTACTTGGCTCAGGAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGTAACAGACAGAAAAGCGCTTTCAGAAGCACAAGCGAGATTTAATGAATCAAGTCAGAAGTTGGACCTTTTAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGTATTCACTAGAGCAAAGGTTAAATGAGCTCCCCAGGAATCACCCCAAAAGCAGTGTCGTCATTGAGGAGCTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCACTGGTTGCGTCACCAACCCTGAGTCCACGGCAGAGCATGCTGTCCACGCAGAACCAGTATAGCACACTGTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAAGCCAGCGGCGCTAACCGGTACTTTGGAAGTTCGTCTTATGGGGTGCCAAGATATCCTAGAGAATGTACCTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GACGGTCAAAAGCAACGTCGGTAGCACTACCTGGGTGGAGTCCAAGTGACAACAGATCGTCTTTTATGAGCAGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACCAGCAAGAGTAAAAGTGGGAGTAGTCGCAACCTCCTGAAAACGGATGACTTGTCCAATGATGTTTGTGCTGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTTGAAGCTAGATAATACTGTGGTTGGTCAAACTAGCTGGAAACCCATTTCAAATCAGTCGTGGGACCAGAAGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTACACTGGAACTAGACAGGTCACGTGAACTGGAAATTTCAGTTTATTGGCGTGATTGGCGATCTCTGTGTGCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GTAAAATTTCTGAGGTTAGAAGATTTTTTAGACAACCAGCGGCATGGCATGTGTCTCTATTTGGAACCACAGGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TACTTTGTTTGCAGAGGTTACTTTTTTTAATCCAGTTATTGAAAGACGACCAAAACTCCAAAGACAAAAGAAAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTTTTTCAAAACAACAAGGCAAAACATTTCTCAGAGCTCCTCAGATGAATATTAATATTGCCACTTGGGGAAGA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTAGTGAGACGAGCTATTCCCACAGTAAATCATTCTGGCACATTCAGCCCTCAGACTCCTGTGCCTGCAACAGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GCCAGTCGTTGACGCACGCATTCCTGATCTAGCACCTCCGGCCAGTGACTCTACAGTAACCAAATTGGACTTTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATCTTGAACCTGAACCTCCTCCAGCCCCACCTCGTGCTTCTTCCCTTGGAGAGACAGATGAATCTTCTGAATTG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGAGTTTTGGATATACCTGGACAGGGTTCAGAAACTGTTTTCAATATTGAGAATGACAGAAATAACCTGCGTCC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AAAATCCAAATCTGAATATGAGCTGAGCATTCCTGACTCAGGTCGAAGCTGCTGGGGTGTTGGAGAGCTTGATG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ACAAGAGAGCTCAGCAGAGGTTTCAGTTCAGTCTACAGGACTTCAGGTGCTGTGCTGTCTTGGGGAGAGGACAC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTTGGAAAGGTGCTGTTGGCGGAATATAAACACACAAATGAAATGTTTGCAATAAAAGCCTTAAAGAAAGGAGA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CATTGTGGCACGAGATGAAGTAGACAGCCTGATGTGTGAAAAAAGAATTTTTGAGACTGTGAATAGTGTCAGGC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ACCCGTTTCTAGTGAACCTTTTTGCATGTTTCCAAACAAAAGAACATGTTTGCTTCGTGATGGAGTATGCTGCA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GGTGGTGACCTGATGATGCACATCCATACTGATGTCTTCTCTGAACCCAGAGCTGTATTTTATGCAGCATGTGT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGTTCTTGGGTTGCAATACTTACATGAACACAAAATTGTTTATAGAGATTTGAAGTTGGATAACTTGTTGCTAG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ATACAGAAGGCTTTGTGAAAATTGCTGACTTTGGTCTTTGCAAAGAAGGAATGGGGTATGGAGATAGGACAAGC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ACATTTTGTGGTACTCCTGAGTTTCTTGCCCCAGAAGTCCTAACAGAAACATCGTACACAAGGGCTGTAGATTG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GTGGGGCCTTGGTGTACTTATATATGAGATGCTCGTCGGCGAGTCTCCCTTTCCTGGTGATGATGAAGAAGAGG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TTTTTGACAGTATTGTAAATGACGAAGTAAGGTATCCAAGGTTCTTATCTACAGAAGCCATTTCCATAATGAGA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AGGCTGCTAAGGAGAAATCCTGAGCGGCGCCTGGGAGCTGGTGAGAAGGATGCAGAGGATGTCAAGAAGCACCC 2738
Query 1 -------------------------------ATGGACAAAAAAGTAAAGCCACCATTTATACCTACCATAAGAG 43
|||||||||||||||||||||||||||.||||||||||.||||
Sbjct 2739 GTTTTTCCGGCTAACCGACTGGAGTGCTCTAATGGACAAAAAAGTAAAGCCACCATTTGTACCTACCATTAGAG 2812
Query 44 GACGAGAAGATGTTAGTAATTTTGATGATGAATTTACCTCAGAAGCACCTATTCTGACTCCACCTCGAGAACCA 117
||||.||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 GACGGGAAGATGTTAGTAACTTTGATGATGAATTTACCTCAGAAGCACCTATTCTGACTCCACCTCGAGAACCA 2886
Query 118 AGGATACTTTCGGAAGAGGAGCAGGAAATGTTCAGAGATTTTGACTACATTGCTGATTGGTGT 180
||||||||.|.|||||||||||||||.||||||...||||||||||||.||||||||||||||
Sbjct 2887 AGGATACTCTTGGAAGAGGAGCAGGAGATGTTCCACGATTTTGACTACGTTGCTGATTGGTGT 2949
