Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15555
- Subject:
- XM_006502868.1
- Aligned Length:
- 5759
- Identities:
- 867
- Gaps:
- 4750
Alignment
Query 1 ATGGCCCCTGAGCCAGCCCCAGGGAGGACGATGGTGCCCCTTGTGCCTGCACTGGTGATGCTTGGTTTGGTGGC 74
|||||.||.|||||||||||||||||||.|||||||||||||||||||||.||.|||||||||||||||.||||
Sbjct 1 ATGGCTCCCGAGCCAGCCCCAGGGAGGAGGATGGTGCCCCTTGTGCCTGCTCTCGTGATGCTTGGTTTGATGGC 74
Query 75 AGGCGCCCATGGTGACAGCAAACCTGTCTTCATTAAAGTCCCTGAGGACCAGACTGGGCTGTCAGGAGGGGTAG 148
|||.||.|||||.|||||||||||.|||||..||||.|||||.||||||||||||||||||||.||||||||.|
Sbjct 75 AGGTGCTCATGGCGACAGCAAACCCGTCTTTGTTAAGGTCCCCGAGGACCAGACTGGGCTGTCGGGAGGGGTGG 148
Query 149 CCTCCTTCGTGTGCCAAGCTACAGGAGAACCCAAGCCGCGCATCACATGGATGAAGAAGGGGAAGAAAGTCAGC 222
|||||||||||||||||||.|||||.|||||||||||.||.||.||.|||||||||||||||||||||||||||
Sbjct 149 CCTCCTTCGTGTGCCAAGCCACAGGGGAACCCAAGCCTCGAATTACGTGGATGAAGAAGGGGAAGAAAGTCAGC 222
Query 223 TCCCAGCGCTTCGAGGTCATTGAGTTTGATGATGGGGCAGGGTCAGTGCTTCGGATCCAGCCATTGCGGGTGCA 296
|||||||||||.|||||.|||||||||||.|||||.||||||||||||||.||||||||||||||.||.|||||
Sbjct 223 TCCCAGCGCTTTGAGGTAATTGAGTTTGACGATGGAGCAGGGTCAGTGCTGCGGATCCAGCCATTACGAGTGCA 296
Query 297 GCGAGATGAAGCCATCTATGAGTGTACAGCTACTAACAGCCTGGGTGAGATCAACACTAGTGCCAAGCTCTCAG 370
||||||.|||||||||||||||||.|||||.||.|||||.||.||.|||||||||||.|||||||||||.||||
Sbjct 297 GCGAGACGAAGCCATCTATGAGTGCACAGCCACGAACAGTCTCGGGGAGATCAACACAAGTGCCAAGCTGTCAG 370
Query 371 TGCTCGAAGAGGAACAGCTGCCCCCTGGGTTCCCTTCCATCGACATGGGGCCTCAGCTGAAGGTGGTGGAGAAG 444
||||.||||||||.||||||||..||||||||||..|.|||||||||||.||||||||||||||||||||||||
Sbjct 371 TGCTTGAAGAGGACCAGCTGCCGTCTGGGTTCCCGACTATCGACATGGGACCTCAGCTGAAGGTGGTGGAGAAG 444
Query 445 GCACGCACAGCCACCATGCTATGTGCTGCAGGCGGAAATCCAGACCCTGAGATTTCTTGGTTCAAGGACTTCCT 518
|..|||||.|||||||||||.|||||.||.||.||.||.||||||||||||||.|||||||||||.||||||||
Sbjct 445 GGTCGCACTGCCACCATGCTGTGTGCAGCCGGTGGGAACCCAGACCCTGAGATCTCTTGGTTCAAAGACTTCCT 518
Query 519 TCCTGTAGACCCTGCCACGAGCAACGGCCGCATCAAGCAGCTGCGTTCAGGTGCCTTGCAGATAGAGAGCAGTG 592
||||||.||||||||..|.||||||||.||.|||||.||||||||.||||||||.|||||||||||||||||.|
Sbjct 519 TCCTGTGGACCCTGCTGCAAGCAACGGTCGTATCAAACAGCTGCGATCAGGTGCATTGCAGATAGAGAGCAGCG 592
Query 593 AGGAATCCGACCAAGGCAAGTACGAGTGTGTGGCGACCAACTCGGCAGGCACACGTTACTCAGCCCCTGCGAAC 666
||||.||.||||||||||||||||||||||||||.||||||||.|||||||||||.|||||.|||||.||.|||
Sbjct 593 AGGAGTCTGACCAAGGCAAGTACGAGTGTGTGGCCACCAACTCTGCAGGCACACGCTACTCGGCCCCCGCCAAC 666
Query 667 CTGTATGTGCGAG---GT-------------------------------------AAG----GA---------- 686
||||||||||||| || ||| ||
Sbjct 667 CTGTATGTGCGAGTGCGTCGCGTGGCTCCTCGTTTCTCCATCCCTCCCAGCAGCCAAGAGGTGATGCCGGGCGG 740
Query 687 ----------CTCA-------GGCAGT-GCCTGGCCCCTG---------------------------------- 708
|||| |||||| |.|..||||.||
Sbjct 741 CAGCGTGAATCTCACATGTGTGGCAGTGGGCGCGCCCATGCCGTATGTGAAATGGATGATGGGCGCCGAGGAAC 814
Query 709 TCACCACAGAG---------------------------CTG-----------TG---------CTGC------- 728
|.||||.|||| ||| || ||||
Sbjct 815 TGACCAAAGAGGATGAGATGCCAGTCGGCCGAAATGTTCTGGAGCTCAGCAATGTCATGCGATCTGCCAACTAT 888
Query 729 ACCTGCCGGGC--TCTCT------------------------GCCCAG-----------AGCCCT--------- 756
|||||...||| ||||| |||||| |||.||
Sbjct 889 ACCTGTGTGGCCATCTCTTCATTAGGCATGATAGAAGCCACGGCCCAGGTCACAGTAAAAGCTCTGCCAAAGCC 962
Query 757 --------------TGGTG-CAGACACGCAAGGGACTGCCATGGGCCCAGT----CTCT----------TCT-- 799
||||| ||||.|| .||.|||| ||||| |||| |||
Sbjct 963 TCCAATTGATCTTGTGGTGACAGAGAC------AACCGCCA-----CCAGTGTTACTCTGACATGGGACTCTGG 1025
Query 800 ------CCTTCCTGCTTCTTTCT---GCA-----------GCAGCAGCAACAG-------CTCCC----ACTG- 841
|...||||..||.|||| ||| |||||.|..|||| ||.|| |.||
Sbjct 1026 AAATACCGAGCCTGTGTCCTTCTACGGCATCCAGTACCGCGCAGCTGGCACAGACGGCCCCTTCCAGGAAGTGG 1099
Query 842 -------GGCAAG--------------TTCCTGGCGTCTGCCACTACTTC-------GCCTTCCTT-------- 879
|||.|| ||..||||.||.|||.|| .||| ||.||||.|
Sbjct 1100 ATGGTGTGGCCAGCACCCGATACAGCATTGGTGGCCTCAGCCCCT-TTTCGGAATATGCTTTCCGTGTGTTGGC 1172
Query 880 ---------CCTTG-------------CAG---------------GCCCATGGGGAAGCAGCCACTCT------ 910
|.||| ||| .|.||.||||.|||||.|||.||
Sbjct 1173 TGTTAACAGCATTGGGCGAGGACCACCCAGTGAGGCAGTGCGAGCACGCACGGGGGAGCAGGCACCCTCCAGCC 1246
Query 911 -TGGGAGCATTTGTATCTTTTGTAGG-------TCTT---GCC-GCA------TGGGCCCG------------- 953
|..|.|| |.|.||.||| .||| ||| ||| |||.||.|
Sbjct 1247 CTCCGCGC--------CGTGTGCAGGCTCGAATGCTTAGCGCCAGCACCATGCTGGTCCAGTGGGAACCACCTG 1312
Query 954 --GAGCCCCAT----------GGGAATTTGGAG----CCAT---CCA-AT--CCGACTTC--TTGGTGTATGTG 1003
||||||.|| |||.||.|.|.| |.|| ||| || |||||..| ||| .|.|
Sbjct 1313 AAGAGCCCAATGGCCTGGTACGGGGATATCGCGTCTACTATACCCCAGATTCCCGACGCCCTTTG-----AGCG 1381
Query 1004 CATGTGTGTGTGCAC-------ACACGGGCACA------CTTATCTGTGTG----------------------- 1041
|.|| |||| ||||.|.|.|| ||||.|...|||
Sbjct 1382 CCTG-------GCACAAGCATAACACTGACGCAGGACTCCTTACCACCGTGGGCAGCCTGCTACCTGGCATCAC 1448
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 1449 CTACAGCCTCCGAGTCCTTGCCTTCACTGCTGTGGGTGACGGCCCACCCAGCCCCACCATCCAAGTCAAGACAC 1522
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 1523 AGCAGGGAGTGCCTGCACAGCCTGCGGACTTCCAGGCTAACGCTGAGTCGGACACCAGGATCCAGCTCTCGTGG 1596
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 1597 CTGCTGCCCCCGCAGGAGCGGATCGTCAAGTATGAGCTGGTGTACTGGGCAGCCGAGGATGAGGGCCAGCAGCA 1670
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 1671 CAAGGTGACCTTCGACCCCACCTCCTCCTACACTCTGGAGGACCTGAAGCCTGACACATTGTACCACTTCCAGC 1744
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 1745 TGGCTGCCCGTTCAGATTTGGGGGTGGGCGTCTTCACGCCCACCGTAGAGGCCCGTACAGCACAGTCCACCCCA 1818
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 1819 TCAGCCCCTCCCCAGAAGGTGACATGTGTGAGCACGGGCTCCACCACGGTCCGGGTAAGTTGGGTTCCACCGCC 1892
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 1893 GGCCGACAGCCGCAACGGCATTATCACCCAGTACTCCGTGGCCTATGAGGCAGTGGACGGCGAAGACCGTAAGC 1966
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 1967 GACATGTGGTGGATGGCATCAGCCGTGAGCATTCCAGCTGGGACCTGCTGGGCCTGGAGAAGTGGACGGAGTAC 2040
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 2041 CGGGTGTGGGTGCGGGCACACACAGATGTGGGCCCTGGCCCTGAGAGCAGCCCGGTGCTGGTGCGCACCGATGA 2114
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 2115 GGACGTGCCTAGCGGGCCACCACGGAAGGTAGAGGTTGAGCCTCTGAACTCCACTGCTGTGCATGTCTCCTGGA 2188
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 2189 AGCTGCCCGTCCCCAACAAGCAGCACGGACAGATTCGTGGCTACCAGGTCACCTATGTGCGGTTGGAGAATGGT 2262
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 2263 GAGCCCCGAGGCCAACCCATCATCCAGGATGTCATGCTGGCTGAGGCTCAGGAGACCACCATCAGCGGCCTCAC 2336
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 2337 CCCCGAGACCACCTACTCCATCACCGTCGCTGCCTACACCACTAAGGGGGATGGTGCCCGAAGCAAGCCCAAGG 2410
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 2411 TGGTTACTACAACAGGGGCAGTCCCAGGACGGCCCACCATGATGGTCAGCACCACGGCCATGCACACCGCGCTG 2484
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 2485 CTGCAGTGGCACCCACCCAAGGAGCTGCCTGGAGAGCTGCTGGGCTACCGTCTCCAATACCGGCGGGCCGACGA 2558
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 2559 GGCGCGGCCCAACACCATAGACTTTGGCAAGGATGACCAACATTTTACAGTCACCGGCCTGCACAAAGGGGCCA 2632
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 2633 CCTACGTCTTCCGGCTCGCTGCCAAGAACCGGGCTGGCCCAGGAGAAGAGTTTGAGAAAGAGATCACCACCCCC 2706
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 2707 GAGGATGTGCCCAGTGGCTTTCCTCAAAATCTTCGAGTGACAGGACTGACCACATCTACCACGGAACTGACCTG 2780
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 2781 GGACCCGCCGGTGCTGGCGGAGAGGAATGGTCACATCACCAACTATACTGTGGTCTACCGTGACATCAACAGCC 2854
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 2855 AGCTTGAACTACAGAATGTCACCAACGACACACACCTTACACTCTTGGGCCTTAAACCGGACACCACTTATGAC 2928
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 2929 ATCAAGGTCCGTGCACATACCAGCAAAGGCGCCGGCCCTCTCAGCCCCAGCATCCAGTCCCGGACCATGCCCGT 3002
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 3003 GGAGCAAGTGTTTGCCAAGAATTTCCGTGTGGCCGCTGCGATGAAGACATCTGTGCTGCTCAGTTGGGAGGTCC 3076
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 3077 CCGACTCTTATAAGTCAGCTGTGCCCTTCAAGATCCTGTACAATGGGCAGAGCGTGGAGGTGGATGGGCACTCG 3150
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 3151 ATGCGGAAGCTGATTGCAGACCTGCAACCCAACACGGAGTACTCCTTCGTCCTGATGAATCGTGGCAGTAGCGC 3224
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 3225 CGGGGGCCTACAGCACCTGGTGTCCATCCGCACTGCCCCGGACCTCCTACCCCAGAAGCCACTGCCTGCCTCCG 3298
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 3299 CCTTTATAGAGGATGGCCGCTTCTCCCTCTCCATGCCTCAAGTGCAGGACCCCTCGCTAGTCAGGTGGTTCTAC 3372
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 3373 ATTGTGGTGGTGCCCATTGACCGTGTGGGCGGGAACTTGCTGGCACCAAGATGGAACACACCAGAGGAGTTGGA 3446
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 3447 GCTGGACGAGCTTCTGGAGGCCATCGAGCAGGGCGAGGAGAAACAGCGGAGGCGCCGGCGCCAAGCAGAGCGGC 3520
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 3521 TGAAGCCTTATGTGGCGGCCCAAGTGGATGTGCTCCCTGACACCTTCACCCTGGGGGACAAGAAGAGCTACCGC 3594
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 3595 GGCTTCTACAACCGGCCCCTGTCTCCGGATCTGAGTTACCAGTGCTTCGTTCTCGCCTCCCTCAAGGAACCCAT 3668
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 3669 GGACCAGAAGCGCTACGCCTCCAGCCCCTACTCGGACGAGATTGTAGTCCAGGTGACGCCAGCACAGCAGCAGG 3742
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 3743 AGGAGCCCGAGATGCTGTGGGTGACAGGCCCTGTCCTGGCGGTCATTCTCATCATACTCATTGTCATCGCCATC 3816
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 3817 CTCCTGTTCAAGAGGAAGAGAACACACTCCCCATCATCAAAGGATGAGCAGTCAATCGGGCTGAAGGACTCCCT 3890
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 3891 GTTGGCCCACTCTTCTGACCCTGTGGAGATGCGAAGGCTTAACTACCAGACCCCAGGTTCCAGTGCCCCCAGTT 3964
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 3965 GCCCGAATATCTCAAGTATGCGAGACCACCCGCCCATCCCCATCACTGACCTGGCAGACAATATTGAGCGCCTC 4038
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 4039 AAAGCCAACGATGGGCTCAAGTTCTCCCAGGAGTATGAGTCCATTGACCCTGGACAGCAGTTCACATGGGAGAA 4112
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 4113 TTCCAACTCGGAGGTGAACAAGCCCAAGAACCGCTATGCAAATGTCATTGCCTATGACCATTCTCGAGTCCTCC 4186
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 4187 TCACCTCCATTGATGGTGTTCCTGGGAGTGACTACATCAATGCCAACTACATTGATGGCTACCGAAAGCAGAAT 4260
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 4261 GCCTACATCGCCACACAGGGTCCGCTGCCCGAGACCATGGGCGATTTCTGGAGGATGGTGTGGGAACAGCGCAC 4334
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 4335 AGCCACAGTGGTCATGATGACCAGGCTAGAGGAGAAATCCCGGGTGAAGTGTGATCAGTATTGGCCAGTCCGTG 4408
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 4409 GCACTGAGACCTATGGCCTCATTCAGGTGACCCTGGTGGACACTGTGGAGTTGGCCACATACACCATGCGCACC 4482
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 4483 TTTGCCCTCCATAAGAGTGGCTCCAGTGAGAAGCGTGAGCTGCGTCAGTTCCAGTTCATGGCCTGGCCAGACCA 4556
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 4557 CGGCGTTCCTGAGTACCCCACTCCCATCTTGGCCTTCCTGAGACGGGTCAAGGCCTGTAACCCACTAGATGCGG 4630
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 4631 GGCCCATGGTGGTGCATTGCAGTGCGGGTGTGGGGCGCACAGGCTGCTTCATCGTCATCGACGCAATGCTGGAG 4704
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 4705 CGTATGAAGCACGAGAAGACGGTTGACATCTATGGCCACGTGACGTGCATGCGCTCACAAAGGAACTACATGGT 4778
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 4779 GCAGACCGAGGACCAGTATGTGTTCATCCACGAGGCCCTGCTAGAGGCTGCCATGTGCGGACACACCGAGGTGC 4852
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 4853 TCGCTCGGAACCTCTATGCCCACATCCAGAAGCTAGGCCAAGTGCCTCCCGGGGAGAGCGTCACGGCCATGGAA 4926
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 4927 CTTGAGTTCAAGTTGCTGGCCAACTCCAAGGCCCACACGTCGCGCTTTGTCAGTGCCAACCTGCCCTGCAACAA 5000
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 5001 GTTCAAGAACCGCCTAGTGAACATCATGCCCTATGAGCTGACCCGAGTGTGCTTGCAACCCATCCGTGGTGTGG 5074
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 5075 AGGGCTCAGACTACATCAATGCCAGCTTTCTAGATGGCTACAGACAGCAGAAGGCCTACATAGCTACACAGGGG 5148
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 5149 CCTCTGGCAGAGAGCACCGAGGACTTCTGGCGCATGTTATGGGAGCACAATTCCACCATCATCGTCATGCTGAC 5222
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 5223 CAAGCTTCGGGAGATGGGCAGGGAGAAATGTCACCAGTACTGGCCAGCAGAGCGCTCCGCTCGCTATCAGTACT 5296
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 5297 TCGTTGTTGACCCGATGGCTGAGTACAACATGCCCCAGTATATTCTGCGTGAATTCAAAGTCACAGACGCCCGG 5370
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 5371 GATGGGCAGTCAAGGACAATCCGACAGTTCCAGTTTACAGACTGGCCAGAGCAAGGAGTACCCAAAACAGGTGA 5444
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 5445 AGGCTTCATCGACTTCATCGGGCAGGTGCACAAGACAAAGGAGCAGTTTGGCCAGGATGGGCCCATCACGGTGC 5518
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 5519 ACTGCAGTGCTGGTGTGGGCCGCACCGGTGTGTTCATCACCCTGAGCATTGTCCTGGAGCGCATGCGGTATGAG 5592
Query 1042 -------------------------------------------------------------------------- 1041
Sbjct 5593 GGTGTGGTTGACATGTTCCAGACCGTGAAGACCCTCCGCACACAGCGCCCTGCAATGGTGCAGACAGAGGACCA 5666
Query 1042 ------------------------------------------------------------- 1041
Sbjct 5667 ATACCAGCTGTGCTACCGTGCGGCCCTGGAATACCTCGGCAGCTTTGATCACTATGCAACG 5727
