Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15681
- Subject:
- XM_011530575.2
- Aligned Length:
- 3840
- Identities:
- 836
- Gaps:
- 2976
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAAGAATCTGCTCACTGAGAAGTGTATATCAAGCCACAATTTCCATCAAAAAGTGATTAAGCAGAGAATGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAAGAAGGTTGATTCCAGGTATTTTAAGGATGGTGCAGTTAAGAAACCTTATTCTGCAAAGACACTGTCCAACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGAAGTCTTCTGCATCCTTTGGGATCCGGAGGGAGTTACCTAGTACCAGTCATCTAGTGCAGTATCGTGGCACA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CATACTTGTACCCGACAGGGCCGGTTAAGAGAACTGCGCATCAGATGCGTGGCCAGAAAGTTCTTATATTTATG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GATTCGAATGACTTTTGGAAGAGTATTTCCCTCTAAAGCCAGATTTTACTATGAGCAGCGATTACTACGGAAGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCTTCGAAGAATGGAAAGAGGAGTGGTGGGTTTTCCAGCACGAGTGGAAACTCTGTGTTCGAGCTGACTGTCAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TACAGGTATTACCTGTACAACCTGATGTTCCAGACGTGGAAGACCTATGTGCGTCAGCAGCAGGAGATGAGGAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAAGTACATTAGAGCCGAGGTTCATGATGCAAAGCAAAAGATGCGACAGGCCTGGAAGTCCTGGTTGATCTACG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGGTTGTTCGTAGGACCAAACTTCAGATGCAGACTACAGCTCTGGAGTTTAGGCAACGGATTATCTTACGGGTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGGTGGAGCACGTGGAGGCAGCGACTAGGACAGGTCCGTGTGAGCCGTGCCCTCCATGCCTCTGCTTTGAAGCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAGGGCCCTGAGCCTCCAGGTGCAGGCTTGGTCACAGTGGCGGGAACAGCTCCTGTATGTCCAGAAGGAGAAAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAAAGGTTGTCTCTGCAGTGAAACATCATCAGCACTGGCAAAAACGGAGATTTCTAAAGGCCTGGCTTGAATAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTGCAAGTCCGCAGAGTGAAGAGACAGCAGAATGAGATGGCTGAGCGATTCCATCATGTCACTGTGCTCCAGAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ATACTTCTGTGACTGGCAGCAGGCCTGGGAGCGGAGGGAGAGCTTGTACGCTCACCATGCCCAGGTGGAGAAAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGGCCAGGAAGATGGCCCTGCGGCGCGCCTTTACTCACTGGAAACACTACATGCTGCTGTGTGCAGAAGAAGCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCCCAGTTTGAGATGGCAGAAGAGCACCACAGGCACAGCCAGCTGTATTTTTGCTTTAGAGCCCTAAAAGACAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGTGACCCACGCTCATCTCCAGCAAATAAGAAGGAATCTTGCTCACCAGCAGCATGGTGTCACGCTGCTGCACA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGTTCTGGAACCTCTGGCGGTCTCAGATTGAGCAGAAAAAGGAAAGAGAGCTGCTCCCCTTACTGCATGCTGCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGGGACCACTACAGAATAGCACTGCTGTGCAAATGTATCGAATTGTGGCTACAGTATACTCAGAAGAGGCGGTA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CAAGCAGCTGCTACAGGCCAGAGCGGATGGTCATTTCCAGCAGAGAGCCCTGCCTGCTGCCTTCCACACATGGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACAGACTCTGGCGATGGCGCCACCAGGAAAATGTCCTCAGTGCAAGAGCAACACGTTTCCACAGGGAGACATTA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAGAAGCAAGTATTTTCTCTCTGGAGGCAGAAGATGTTTCAGCATCGAGAAAACCGCCTGGCAGAGAGAATGGC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CATCCTTCACGCAGAGCGACAGCTTCTGTATAGGTCTTGGTTCATGTGGCACCAGCAGGCAGCAGCACGTCACC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGGAGCAGGAGTGGCAAACAGTGGCCTGTGCCCACCACCGCCACGGGCGGCTCAAGAAAGCTTTCTGCCTCTGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGGGAAAGTGCCCAAGGGCTCAGAACAGAGAGGACGGGCAGGGTGCGGGCAGCAGAATTCCACATGGCCCAGCT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCTGCGTTGGGCCTGGAGCCAGTGGAGGGAGTGCCTGGCCCTGCGGGGAGCGGAGCGGCAGAAGCTGATGCGAG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CAGACCTGCACCACCAGCACAGCGTGCTGCACAGGGCGCTGCAGGCATGGGTGACTTACCAGGGCAGGGTGCGA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AGCATCCTCCGGGAGGTGGCAGCCAGGGAGAGCCAGCACAACAGGCAGCTGCTGCGCGGGGCATTACGTCGCTG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GAAAGAGAACACCATGGCCCGAGTGGATGAAGCCAAAAAAACCTTTCAAGCAAGTACTCATTACAGAAGGACCA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TATGTTCCAAGGTCCTGGTCCAGTGGCGGGAAGCTGTGTCAGTGCAGATGTATTACCGACAGCAGGAGGACTGT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GCCATCTGGGAGGCCCAGAAGGTGCTGGACAGGGGCTGTCTGCGGACCTGGTTTCAGCGCTGGTGGGACTGCAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CCGGAGGTCAGCCCAGCAGAGACTGCAGCTGGAGAGGGCAGTGCAACACCACCACCGGCAGCTGCTGCTGGAGG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GGCTGGCCCGGTGGAAGACGCACCATCTGCAGTGTGTCAGGAAGAGGCTCCTGCACAGGCAGAGCACCCAACTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CTGGCACAGAGACTCAGCCGGACCTGCTTCCGCCAGTGGAGACAACAGCTGGCAGCCAGGAGGCAGGAGCAGCG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GGCGACAGTGCGGGCCCTGTGGTTCTGGGCCTTCTCGCTGCAGGCAAAGGTGTGGGCCACGTGGCTGGCCTTTG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TACTGGAAAGGAGGAGAAAGAAGGCGCGGCTGCAGTGGGCGCTCCAGGCCTACCAGGGGCAGCTCCTCCAGGAG 2664
Query 1 ------------------------------------ATGGCC---------------CAGGCCCACC------- 16
|.|||| ||||||||.|
Sbjct 2665 GGTGCCACGCGGCTCCTGCGCTTTGCAGCCAGCATGAAGGCCTCCCGGCAGCAGCTGCAGGCCCAGCAGCAGGT 2738
Query 17 CCA----GCTTAC------------------------------------------------TTGCTGACCTTG- 37
||| |||.|| .|||||..|..|
Sbjct 2739 CCAGGCGGCTCACAGTCTCCATCGTGCCGTCCGCCGCTGTGCCACGCTCTGGAAACAGAAAGTGCTGGGCCGGG 2812
Query 38 -------GCCTC-GCCTTTCCTGAC----------------------------TTTCA--GTCTCCCTATAAA- 72
||||| ||| ||||.| |||.| |||.||.|.|.||
Sbjct 2813 GCGGGAAGCCTCAGCC---CCTGGCAGCCATCGCACCCAGCAGGAAAGTGACGTTTGAGGGTCCCCTTCTCAAC 2883
Query 73 ---ATTG--------------------------GAGATC------CCACAGAGATCTCAGACCCCCCT-GCAGC 110
|||| ||||.| ||||||...||||.| ||.|| |.||
Sbjct 2884 CGCATTGCTGCTGGGGCTGGGGATGGCACCCTTGAGACCAAGAGGCCACAGGCTTCTCGG---CCTCTGGGAG- 2953
Query 111 CCCTGGTCAGCC------CAGGGGAACAGACCCCATGTTTCTTTCC----AG--CAACACTGCCCACTCAGCGA 172
|.||||.|.||| |.|.||| .|||||.| || || ||||||||||||||||||||
Sbjct 2954 CTCTGGGCCGCCTGGCTGCTGAGGA----GCCCCACG-------CCCTGGAGCTCAACACTGCCCACTCAGCGA 3016
Query 173 GGAAGCAGCCGCGACGCCCACACTTCCTGTTGGAGCCTGCGCAGAGCCAGA---------GGCCTCAGAAGCCA 237
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 3017 GGAAGCAGCCGCGACGCCCACACTTCCTGTTGGAGCCTGCGCAGAGCCAGAGGTCCCTGGGGCCTCAGAAGCCA 3090
Query 238 CAGGAACATGGCCTAGGCATGGCTCAGCCAGCAGCCCCCTCCCTGACGCGGCCCTTCCTGGCAGAGGCCCCGAC 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3091 CAGGAACATGGCCTAGGCATGGCTCAGCCAGCAGCCCCCTCCCTGACGCGGCCCTTCCTGGCAGAGGCCCCGAC 3164
Query 312 AGCACTGGTCCCACACAGCCCCCTGCCTGGGGCCCTGTCAAGCGCCCCTGGCCCGAAGCAGCCCCCGACGGCAA 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3165 AGCACTGGTCCCACACAGCCCCCTGCCTGGGGCCCTGTCAAGCGCCCCTGGCCCGAAGCAGCCCCCGACGGCAA 3238
Query 386 GCACAGGCCCGGAGCTGCTGCTGCTGCCTCTTTCCTCCTTCATGCCCTGCGGGGCGGCTGCACCAGCCAGGGTG 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3239 GCACAGGCCCGGAGCTGCTGCTGCTGCCTCTTTCCTCCTTCATGCCCTGCGGGGCGGCTGCACCAGCCAGGGTG 3312
Query 460 TCAGCACAGCGGGCTACTCCTAGGGATAAGCCCCCGGTCCCCTCATCCCTGGCCAGTGTCCCTGACCCCCATCT 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3313 TCAGCACAGCGGGCTACTCCTAGGGATAAGCCCCCGGTCCCCTCATCCCTGGCCAGTGTCCCTGACCCCCATCT 3386
Query 534 ACTCCTTCCTGGGGACTTCTCAGCCACCAGGGCTGGGCCTGGACTTTCAACTGCAGGCAGCCTGGACCTTGAGG 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3387 ACTCCTTCCTGGGGACTTCTCAGCCACCAGGGCTGGGCCTGGACTTTCAACTGCAGGCAGCCTGGACCTTGAGG 3460
Query 608 CTGAACTTGAGGAGATCCAGCAGCAACTACTGCACTACCAGACCACCAAGCAGAACCTCTGGTCCTGTCGGCGG 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3461 CTGAACTTGAGGAGATCCAGCAGCAACTACTGCACTACCAGACCACCAAGCAGAACCTCTGGTCCTGTCGGCGG 3534
Query 682 CAAGCGAGCAGCCTGCGCAGGTGGCTGGAGCTGAACAGAGAGGAGCCGGGGCCTGAGGACCAGGAAGTAGAGCA 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3535 CAAGCGAGCAGCCTGCGCAGGTGGCTGGAGCTGAACAGAGAGGAGCCGGGGCCTGAGGACCAGGAAGTAGAGCA 3608
Query 756 GCAGGTGCAGAAAGAGCTGGAA---------------------------------------------------- 777
||||||||||||||||||||||
Sbjct 3609 GCAGGTGCAGAAAGAGCTGGAACAGGTGAGGCCCCAGGCCATCCCCAGGTGTCCCTGGGGACGCCCCGGGCTGT 3682
Query 778 -----------------------------------CAGGTGGAAATGCAGATCCAGCTGCTGGCAGAGGAGCTC 816
|||||||||||||||||||||||||||||||||||||||
Sbjct 3683 GCTCCCTCTCAGCCCTGCCTGTCCCTCCATGGCCCCAGGTGGAAATGCAGATCCAGCTGCTGGCAGAGGAGCTC 3756
Query 817 CAGGCTCAGCGCCAGCCCATTGGCGCCTGCGTTGCCCGCATCCAGGCCCTGCGGCAGGCCCTGTGC 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3757 CAGGCTCAGCGCCAGCCCATTGGCGCCTGCGTTGCCCGCATCCAGGCCCTGCGGCAGGCCCTGTGC 3822
