Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15681
- Subject:
- XM_011530581.3
- Aligned Length:
- 3795
- Identities:
- 836
- Gaps:
- 2931
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAAGAATCTGCTCACTGAGAAGTGTATATCAAGCCACAATTTCCATCAAAAAGTGATTAAGCAGAGAATGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAAGAAGGTTGATTCCAGGTATTTTAAGGATGGTGCAGTTAAGAAACCTTATTCTGCAAAGACACTGTCCAACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGAAGTCTTCTGCATCCTTTGGGATCCGGAGGGAGTTACCTAGTACCAGTCATCTAGTGCAGTATCGTGGCACA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CATACTTGTACCCGACAGGGCCGGTTAAGAGAACTGCGCATCAGATGCGTGGCCAGAAAGTTCTTATATTTATG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GATTCGAATGACTTTTGGAAGAGTATTTCCCTCTAAAGCCAGATTTTACTATGAGCAGCGATTACTACGGAAGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCTTCGAAGAATGGAAAGAGGAGTGGTGGGTTTTCCAGCACGAGTGGAAACTCTGTGTTCGAGCTGACTGTCAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TACAGGTATTACCTGTACAACCTGATGTTCCAGACGTGGAAGACCTATGTGCGTCAGCAGCAGGAGATGAGGAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAAGTACATTAGAGCCGAGGTTCATGATGCAAAGCAAAAGATGCGACAGGCCTGGAAGTCCTGGTTGATCTACG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGGTTGTTCGTAGGACCAAACTTCAGATGCAGACTACAGCTCTGGAGTTTAGGCAACGGATTATCTTACGGGTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGGTGGAGCACGTGGAGGCAGCGACTAGGACAGGTCCGTGTGAGCCGTGCCCTCCATGCCTCTGCTTTGAAGCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAGGGCCCTGAGCCTCCAGGTGCAGGCTTGGTCACAGTGGCGGGAACAGCTCCTGTATGTCCAGAAGGAGAAAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAAAGGTTGTCTCTGCAGTGAAACATCATCAGCACTGGCAAAAACGGAGATTTCTAAAGGCCTGGCTTGAATAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTGCAAGTCCGCAGAGTGAAGAGACAGCAGAATGAGATGGCTGAGCGATTCCATCATGTCACTGTGCTCCAGAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ATACTTCTGTGACTGGCAGCAGGCCTGGGAGCGGAGGGAGAGCTTGTACGCTCACCATGCCCAGGTGGAGAAAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGGCCAGGAAGATGGCCCTGCGGCGCGCCTTTACTCACTGGAAACACTACATGCTGCTGTGTGCAGAAGAAGCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCCCAGTTTGAGATGGCAGAAGAGCACCACAGGCACAGCCAGCTGTATTTTTGCTTTAGAGCCCTAAAAGACAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGTGACCCACGCTCATCTCCAGCAAATAAGAAGGAATCTTGCTCACCAGCAGCATGGTGTCACGCTGCTGCACA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGTTCTGGAACCTCTGGCGGTCTCAGATTGAGCAGAAAAAGGAAAGAGAGCTGCTCCCCTTACTGCATGCTGCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGGGACCACTACAGAATAGCACTGCTGTGCAAATGTATCGAATTGTGGCTACAGTATACTCAGAAGAGGCGGTA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CAAGCAGCTGCTACAGGCCAGAGCGGATGGTCATTTCCAGCAGAGAGCCCTGCCTGCTGCCTTCCACACATGGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACAGACTCTGGCGATGGCGCCACCAGGAAAATGTCCTCAGTGCAAGAGCAACACGTTTCCACAGGGAGACATTA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAGAAGCAAGTATTTTCTCTCTGGAGGCAGAAGATGTTTCAGCATCGAGAAAACCGCCTGGCAGAGAGAATGGC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CATCCTTCACGCAGAGCGACAGCTTCTGTATAGGTCTTGGTTCATGTGGCACCAGCAGGCAGCAGCACGTCACC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGGAGCAGGAGTGGCAAACAGTGGCCTGTGCCCACCACCGCCACGGGCGGCTCAAGAAAGCTTTCTGCCTCTGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGGGAAAGTGCCCAAGGGCTCAGAACAGAGAGGACGGGCAGGGTGCGGGCAGCAGAATTCCACATGGCCCAGCT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCTGCGTTGGGCCTGGAGCCAGTGGAGGGAGTGCCTGGCCCTGCGGGGAGCGGAGCGGCAGAAGCTGATGCGAG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CAGACCTGCACCACCAGCACAGCGTGCTGCACAGGGCGCTGCAGGCATGGGTGACTTACCAGGGCAGGGTGCGA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AGCATCCTCCGGGAGGTGGCAGCCAGGGAGAGCCAGCACAACAGGCAGCTGCTGCGCGGGGCATTACGTCGCTG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GAAAGAGAACACCATGGCCCGAGTGGATGAAGCCAAAAAAACCTTTCAAGCAAGTACTCATTACAGAAGGACCA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TATGTTCCAAGGTCCTGGTCCAGTGGCGGGAAGCTGTGTCAGTGCAGATGTATTACCGACAGCAGGAGGACTGT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GCCATCTGGGAGGCCCAGAAGGTGCTGGACAGGGGCTGTCTGCGGACCTGGTTTCAGCGCTGGTGGGACTGCAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CCGGAGGTCAGCCCAGCAGAGACTGCAGCTGGAGAGGGCAGTGCAACACCACCACCGGCAGCTGCTGCTGGAGG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GGCTGGCCCGGTGGAAGACGCACCATCTGCAGTGTGTCAGGAAGAGGCTCCTGCACAGGCAGAGCACCCAACTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CTGGCACAGAGACTCAGCCGGACCTGCTTCCGCCAGTGGAGACAACAGGCACATCAGCTTCCTTCCGTCTGCAG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TCTGCATAAGAACAGTTACTTCAAGCTGGCAGCCAGGAGGCAGGAGCAGCGGGCGACAGTGCGGGCCCTGTGGT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TCTGGGCCTTCTCGCTGCAGGCAAAGGTGTGGGCCACGTGGCTGGCCTTTGTACTGGAAAGGAGGAGAAAGAAG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GCGCGGCTGCAGTGGGCGCTCCAGGCCTACCAGGGGCAGCTCCTCCAGGAGGGTGCCACGCGGCTCCTGCGCTT 2738
Query 1 -------------ATGGCC---------------CAGGCCCACC-------CCA----GCTTAC---------- 25
|.|||| ||||||||.| ||| |||.||
Sbjct 2739 TGCAGCCAGCATGAAGGCCTCCCGGCAGCAGCTGCAGGCCCAGCAGCAGGTCCAGGCGGCTCACAGTCTCCATC 2812
Query 26 --------------------------------------TTGCTGACCTTG--------GCCTC-GCCTTTCCTG 52
.|||||..|..| ||||| ||| ||||
Sbjct 2813 GTGCCGTCCGCCGCTGTGCCACGCTCTGGAAACAGAAAGTGCTGGGCCGGGGCGGGAAGCCTCAGCC---CCTG 2883
Query 53 AC----------------------------TTTCA--GTCTCCCTATAAA----ATTG---------------- 76
.| |||.| |||.||.|.|.|| ||||
Sbjct 2884 GCAGCCATCGCACCCAGCAGGAAAGTGACGTTTGAGGGTCCCCTTCTCAACCGCATTGCTGCTGGGGCTGGGGA 2957
Query 77 ----------GAGATC------CCACAGAGATCTCAGACCCCCCT-GCAGCCCCTGGTCAGCC------CAGGG 127
||||.| ||||||...||||.| ||.|| |.|| |.||||.|.||| |.|.|
Sbjct 2958 TGGCACCCTTGAGACCAAGAGGCCACAGGCTTCTCGG---CCTCTGGGAG-CTCTGGGCCGCCTGGCTGCTGAG 3027
Query 128 GAACAGACCCCATGTTTCTTTCC----AG--CAACACTGCCCACTCAGCGAGGAAGCAGCCGCGACGCCCACAC 195
|| .|||||.| || || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 3028 GA----GCCCCACG-------CCCTGGAGCTCAACACTGCCCACTCAGCGAGGAAGCAGCCGCGACGCCCACAC 3090
Query 196 TTCCTGTTGGAGCCTGCGCAGAGCCAGAGGCCTCAGAAGCCACAGGAACATGGCCTAGGCATGGCTCAGCCAGC 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3091 TTCCTGTTGGAGCCTGCGCAGAGCCAGAGGCCTCAGAAGCCACAGGAACATGGCCTAGGCATGGCTCAGCCAGC 3164
Query 270 AGCCCCCTCCCTGACGCGGCCCTTCCTGGCAGAGGCCCCGACAGCACTGGTCCCACACAGCCCCCTGCCTGGGG 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3165 AGCCCCCTCCCTGACGCGGCCCTTCCTGGCAGAGGCCCCGACAGCACTGGTCCCACACAGCCCCCTGCCTGGGG 3238
Query 344 CCCTGTCAAGCGCCCCTGGCCCGAAGCAGCCCCCGACGGCAAGCACAGGCCCGGAGCTGCTGCTGCTGCCTCTT 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3239 CCCTGTCAAGCGCCCCTGGCCCGAAGCAGCCCCCGACGGCAAGCACAGGCCCGGAGCTGCTGCTGCTGCCTCTT 3312
Query 418 TCCTCCTTCATGCCCTGCGGGGCGGCTGCACCAGCCAGGGTGTCAGCACAGCGGGCTACTCCTAGGGATAAGCC 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3313 TCCTCCTTCATGCCCTGCGGGGCGGCTGCACCAGCCAGGGTGTCAGCACAGCGGGCTACTCCTAGGGATAAGCC 3386
Query 492 CCCGGTCCCCTCATCCCTGGCCAGTGTCCCTGACCCCCATCTACTCCTTCCTGGGGACTTCTCAGCCACCAGGG 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3387 CCCGGTCCCCTCATCCCTGGCCAGTGTCCCTGACCCCCATCTACTCCTTCCTGGGGACTTCTCAGCCACCAGGG 3460
Query 566 CTGGGCCTGGACTTTCAACTGCAGGCAGCCTGGACCTTGAGGCTGAACTTGAGGAGATCCAGCAGCAACTACTG 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3461 CTGGGCCTGGACTTTCAACTGCAGGCAGCCTGGACCTTGAGGCTGAACTTGAGGAGATCCAGCAGCAACTACTG 3534
Query 640 CACTACCAGACCACCAAGCAGAACCTCTGGTCCTGTCGGCGGCAAGCGAGCAGCCTGCGCAGGTGGCTGGAGCT 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3535 CACTACCAGACCACCAAGCAGAACCTCTGGTCCTGTCGGCGGCAAGCGAGCAGCCTGCGCAGGTGGCTGGAGCT 3608
Query 714 GAACAGAGAGGAGCCGGGGCCTGAGGACCAGGAAGTAGAGCAGCAGGTGCAGAAAGAGCTGGAACAGGTGGAAA 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3609 GAACAGAGAGGAGCCGGGGCCTGAGGACCAGGAAGTAGAGCAGCAGGTGCAGAAAGAGCTGGAACAGGTGGAAA 3682
Query 788 TGCAGATCCAGCTGCTGGCAGAGGAGCTCCAGGCTCAGCGCCAGCCCATTGGCGCCTGCGTTGCCCGCATCCAG 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3683 TGCAGATCCAGCTGCTGGCAGAGGAGCTCCAGGCTCAGCGCCAGCCCATTGGCGCCTGCGTTGCCCGCATCCAG 3756
Query 862 GCCCTGCGGCAGGCCCTGTGC 882
|||||||||||||||||||||
Sbjct 3757 GCCCTGCGGCAGGCCCTGTGC 3777
