Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15681
- Subject:
- XM_017029145.1
- Aligned Length:
- 3666
- Identities:
- 836
- Gaps:
- 2802
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAAGAATCTGCTCACTGAGAAGTGTATATCAAGCCACAATTTCCATCAAAAAGTGATTAAGCAGAGAATGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAAGAAGGTTGATTCCAGGTATTTTAAGGATGGTGCAGTTAAGAAACCTTATTCTGCAAAGACACTGTCCAACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGAAGTCTTCTGCATCCTTTGGGATCCGGAGGGAGTTACCTAGTACCAGTCATCTAGTGCAGTATCGTGGCACA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CATACTTGTACCCGACAGGGCCGGTTAAGAGAACTGCGCATCAGATTTTACTATGAGCAGCGATTACTACGGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGTCTTCGAAGAATGGAAAGAGGAGTGGTGGGTTTTCCAGCACGAGTGGAAACTCTGTGTTCGAGCTGACTGTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACTACAGGTATTACCTGTACAACCTGATGTTCCAGACGTGGAAGACCTATGTGCGTCAGCAGCAGGAGATGAGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AACAAGTACATTAGAGCCGAGGTTCATGATGCAAAGCAAAAGATGCGACAGGCCTGGAAGTCCTGGTTGATCTA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGTGGTTGTTCGTAGGACCAAACTTCAGATGCAGACTACAGCTCTGGAGTTTAGGCAACGGATTATCTTACGGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGTGGTGGAGCACGTGGAGGCAGCGACTAGGACAGGTCCGTGTGAGCCGTGCCCTCCATGCCTCTGCTTTGAAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CACAGGGCCCTGAGCCTCCAGGTGCAGGCTTGGTCACAGTGGCGGGAACAGCTCCTGTATGTCCAGAAGGAGAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACAAAAGGTTGTCTCTGCAGTGAAACATCATCAGCACTGGCAAAAACGGAGATTTCTAAAGGCCTGGCTTGAAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACCTGCAAGTCCGCAGAGTGAAGAGACAGCAGAATGAGATGGCTGAGCGATTCCATCATGTCACTGTGCTCCAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATATACTTCTGTGACTGGCAGCAGGCCTGGGAGCGGAGGGAGAGCTTGTACGCTCACCATGCCCAGGTGGAGAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACTGGCCAGGAAGATGGCCCTGCGGCGCGCCTTTACTCACTGGAAACACTACATGCTGCTGTGTGCAGAAGAAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTGCCCAGTTTGAGATGGCAGAAGAGCACCACAGGCACAGCCAGCTGCTGCTGCACAGGTTCTGGAACCTCTGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CGGTCTCAGATTGAGCAGAAAAAGGAAAGAGAGCTGCTCCCCTTACTGCATGCTGCCTGGGACCACTACAGAAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGCACTGCTGTGCAAATGTATCGAATTGTGGCTACAGTATACTCAGAAGAGGCGGTACAAGCAGCTGCTACAGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCAGAGCGGATGGTCATTTCCAGCAGAGAGCCCTGCCTGCTGCCTTCCACACATGGAACAGACTCTGGCGATGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CGCCACCAGGAAAATGTCCTCAGTGCAAGAGCAACACGTTTCCACAGGGAGACATTAGAGAAGCAAGTATTTTC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TCTCTGGAGGCAGAAGATGTTTCAGCATCGAGAAAACCGCCTGGCAGAGAGAATGGCCATCCTTCACGCAGAGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GACAGCTTCTGTATAGGTCTTGGTTCATGTGGCACCAGCAGGCAGCAGCACGTCACCAGGAGCAGGAGTGGCAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ACAGTGGCCTGTGCCCACCACCGCCACGGGCGGCTCAAGAAAGCTTTCTGCCTCTGGAGGGAAAGTGCCCAAGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GCTCAGAACAGAGAGGACGGGCAGGGTGCGGGCAGCAGAATTCCACATGGCCCAGCTCCTGCGTTGGGCCTGGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GCCAGTGGAGGGAGTGCCTGGCCCTGCGGGGAGCGGAGCGGCAGAAGCTGATGCGAGCAGACCTGCACCACCAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CACAGCGTGCTGCACAGGGCGCTGCAGGCATGGGTGACTTACCAGGGCAGGGTGCGAAGCATCCTCCGGGAGGT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGCAGCCAGGGAGAGCCAGCACAACAGGCAGCTGCTGCGCGGGGCATTACGTCGCTGGAAAGAGAACACCATGG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCCGAGTGGATGAAGCCAAAAAAACCTTTCAAGCAAGTACTCATTACAGAAGGACCATATGTTCCAAGGTCCTG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GTCCAGTGGCGGGAAGCTGTGTCAGTGCAGATGTATTACCGACAGCAGGAGGACTGTGCCATCTGGGAGGCCCA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GAAGGTGCTGGACAGGGGCTGTCTGCGGACCTGGTTTCAGCGCTGGTGGGACTGCAGCCGGAGGTCAGCCCAGC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AGAGACTGCAGCTGGAGAGGGCAGTGCAACACCACCACCGGCAGCTGCTGCTGGAGGGGCTGGCCCGGTGGAAG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ACGCACCATCTGCAGTGTGTCAGGAAGAGGCTCCTGCACAGGCAGAGCACCCAACTGCTGGCACAGAGACTCAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CCGGACCTGCTTCCGCCAGTGGAGACAACAGCTGGCAGCCAGGAGGCAGGAGCAGCGGGCGACAGTGCGGGCCC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TGTGGTTCTGGGCCTTCTCGCTGCAGGCAAAGGTGTGGGCCACGTGGCTGGCCTTTGTACTGGAAAGGAGGAGA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AAGAAGGCGCGGCTGCAGTGGGCGCTCCAGGCCTACCAGGGGCAGCTCCTCCAGGAGGGTGCCACGCGGCTCCT 2516
Query 1 -------------------ATGGCC---------------CAGGCCCACC-------CCA----GCTTAC---- 25
|.|||| ||||||||.| ||| |||.||
Sbjct 2517 GCGCTTTGCAGCCAGCATGAAGGCCTCCCGGCAGCAGCTGCAGGCCCAGCAGCAGGTCCAGGCGGCTCACAGTC 2590
Query 26 --------------------------------------------TTGCTGACCTTG--------GCCTC-GCCT 46
.|||||..|..| ||||| |||
Sbjct 2591 TCCATCGTGCCGTCCGCCGCTGTGCCACGCTCTGGAAACAGAAAGTGCTGGGCCGGGGCGGGAAGCCTCAGCC- 2663
Query 47 TTCCTGAC----------------------------TTTCA--GTCTCCCTATAAA----ATTG---------- 76
||||.| |||.| |||.||.|.|.|| ||||
Sbjct 2664 --CCTGGCAGCCATCGCACCCAGCAGGAAAGTGACGTTTGAGGGTCCCCTTCTCAACCGCATTGCTGCTGGGGC 2735
Query 77 ----------------GAGATC------CCACAGAGATCTCAGACCCCCCT-GCAGCCCCTGGTCAGCC----- 122
||||.| ||||||...||||.| ||.|| |.|| |.||||.|.|||
Sbjct 2736 TGGGGATGGCACCCTTGAGACCAAGAGGCCACAGGCTTCTCGG---CCTCTGGGAG-CTCTGGGCCGCCTGGCT 2805
Query 123 -CAGGGGAACAGACCCCATGTTTCTTTCC----AG--CAACACTGCCCACTCAGCGAGGAAGCAGCCGCGACGC 189
|.|.||| .|||||.| || || |||||||||||||||||||||||||||||||||||||
Sbjct 2806 GCTGAGGA----GCCCCACG-------CCCTGGAGCTCAACACTGCCCACTCAGCGAGGAAGCAGCCGCGACGC 2868
Query 190 CCACACTTCCTGTTGGAGCCTGCGCAGAGCCAGAGGCCTCAGAAGCCACAGGAACATGGCCTAGGCATGGCTCA 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2869 CCACACTTCCTGTTGGAGCCTGCGCAGAGCCAGAGGCCTCAGAAGCCACAGGAACATGGCCTAGGCATGGCTCA 2942
Query 264 GCCAGCAGCCCCCTCCCTGACGCGGCCCTTCCTGGCAGAGGCCCCGACAGCACTGGTCCCACACAGCCCCCTGC 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2943 GCCAGCAGCCCCCTCCCTGACGCGGCCCTTCCTGGCAGAGGCCCCGACAGCACTGGTCCCACACAGCCCCCTGC 3016
Query 338 CTGGGGCCCTGTCAAGCGCCCCTGGCCCGAAGCAGCCCCCGACGGCAAGCACAGGCCCGGAGCTGCTGCTGCTG 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3017 CTGGGGCCCTGTCAAGCGCCCCTGGCCCGAAGCAGCCCCCGACGGCAAGCACAGGCCCGGAGCTGCTGCTGCTG 3090
Query 412 CCTCTTTCCTCCTTCATGCCCTGCGGGGCGGCTGCACCAGCCAGGGTGTCAGCACAGCGGGCTACTCCTAGGGA 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3091 CCTCTTTCCTCCTTCATGCCCTGCGGGGCGGCTGCACCAGCCAGGGTGTCAGCACAGCGGGCTACTCCTAGGGA 3164
Query 486 TAAGCCCCCGGTCCCCTCATCCCTGGCCAGTGTCCCTGACCCCCATCTACTCCTTCCTGGGGACTTCTCAGCCA 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3165 TAAGCCCCCGGTCCCCTCATCCCTGGCCAGTGTCCCTGACCCCCATCTACTCCTTCCTGGGGACTTCTCAGCCA 3238
Query 560 CCAGGGCTGGGCCTGGACTTTCAACTGCAGGCAGCCTGGACCTTGAGGCTGAACTTGAGGAGATCCAGCAGCAA 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3239 CCAGGGCTGGGCCTGGACTTTCAACTGCAGGCAGCCTGGACCTTGAGGCTGAACTTGAGGAGATCCAGCAGCAA 3312
Query 634 CTACTGCACTACCAGACCACCAAGCAGAACCTCTGGTCCTGTCGGCGGCAAGCGAGCAGCCTGCGCAGGTGGCT 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3313 CTACTGCACTACCAGACCACCAAGCAGAACCTCTGGTCCTGTCGGCGGCAAGCGAGCAGCCTGCGCAGGTGGCT 3386
Query 708 GGAGCTGAACAGAGAGGAGCCGGGGCCTGAGGACCAGGAAGTAGAGCAGCAGGTGCAGAAAGAGCTGGAA---- 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3387 GGAGCTGAACAGAGAGGAGCCGGGGCCTGAGGACCAGGAAGTAGAGCAGCAGGTGCAGAAAGAGCTGGAACAGG 3460
Query 778 -------------------------------------------------------------------------- 777
Sbjct 3461 TGAGGCCCCAGGCCATCCCCAGGTGTCCCTGGGGACGCCCCGGGCTGTGCTCCCTCTCAGCCCTGCCTGTCCCT 3534
Query 778 ---------CAGGTGGAAATGCAGATCCAGCTGCTGGCAGAGGAGCTCCAGGCTCAGCGCCAGCCCATTGGCGC 842
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3535 CCATGGCCCCAGGTGGAAATGCAGATCCAGCTGCTGGCAGAGGAGCTCCAGGCTCAGCGCCAGCCCATTGGCGC 3608
Query 843 CTGCGTTGCCCGCATCCAGGCCCTGCGGCAGGCCCTGTGC 882
||||||||||||||||||||||||||||||||||||||||
Sbjct 3609 CTGCGTTGCCCGCATCCAGGCCCTGCGGCAGGCCCTGTGC 3648
