Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_15681
Subject:
XM_017029145.1
Aligned Length:
3666
Identities:
836
Gaps:
2802

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAAGAATCTGCTCACTGAGAAGTGTATATCAAGCCACAATTTCCATCAAAAAGTGATTAAGCAGAGAATGGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GAAGAAGGTTGATTCCAGGTATTTTAAGGATGGTGCAGTTAAGAAACCTTATTCTGCAAAGACACTGTCCAACA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGAAGTCTTCTGCATCCTTTGGGATCCGGAGGGAGTTACCTAGTACCAGTCATCTAGTGCAGTATCGTGGCACA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CATACTTGTACCCGACAGGGCCGGTTAAGAGAACTGCGCATCAGATTTTACTATGAGCAGCGATTACTACGGAA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGTCTTCGAAGAATGGAAAGAGGAGTGGTGGGTTTTCCAGCACGAGTGGAAACTCTGTGTTCGAGCTGACTGTC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ACTACAGGTATTACCTGTACAACCTGATGTTCCAGACGTGGAAGACCTATGTGCGTCAGCAGCAGGAGATGAGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AACAAGTACATTAGAGCCGAGGTTCATGATGCAAAGCAAAAGATGCGACAGGCCTGGAAGTCCTGGTTGATCTA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CGTGGTTGTTCGTAGGACCAAACTTCAGATGCAGACTACAGCTCTGGAGTTTAGGCAACGGATTATCTTACGGG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TGTGGTGGAGCACGTGGAGGCAGCGACTAGGACAGGTCCGTGTGAGCCGTGCCCTCCATGCCTCTGCTTTGAAG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CACAGGGCCCTGAGCCTCCAGGTGCAGGCTTGGTCACAGTGGCGGGAACAGCTCCTGTATGTCCAGAAGGAGAA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ACAAAAGGTTGTCTCTGCAGTGAAACATCATCAGCACTGGCAAAAACGGAGATTTCTAAAGGCCTGGCTTGAAT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ACCTGCAAGTCCGCAGAGTGAAGAGACAGCAGAATGAGATGGCTGAGCGATTCCATCATGTCACTGTGCTCCAG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ATATACTTCTGTGACTGGCAGCAGGCCTGGGAGCGGAGGGAGAGCTTGTACGCTCACCATGCCCAGGTGGAGAA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  ACTGGCCAGGAAGATGGCCCTGCGGCGCGCCTTTACTCACTGGAAACACTACATGCTGCTGTGTGCAGAAGAAG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CTGCCCAGTTTGAGATGGCAGAAGAGCACCACAGGCACAGCCAGCTGCTGCTGCACAGGTTCTGGAACCTCTGG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CGGTCTCAGATTGAGCAGAAAAAGGAAAGAGAGCTGCTCCCCTTACTGCATGCTGCCTGGGACCACTACAGAAT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AGCACTGCTGTGCAAATGTATCGAATTGTGGCTACAGTATACTCAGAAGAGGCGGTACAAGCAGCTGCTACAGG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CCAGAGCGGATGGTCATTTCCAGCAGAGAGCCCTGCCTGCTGCCTTCCACACATGGAACAGACTCTGGCGATGG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CGCCACCAGGAAAATGTCCTCAGTGCAAGAGCAACACGTTTCCACAGGGAGACATTAGAGAAGCAAGTATTTTC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TCTCTGGAGGCAGAAGATGTTTCAGCATCGAGAAAACCGCCTGGCAGAGAGAATGGCCATCCTTCACGCAGAGC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GACAGCTTCTGTATAGGTCTTGGTTCATGTGGCACCAGCAGGCAGCAGCACGTCACCAGGAGCAGGAGTGGCAA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  ACAGTGGCCTGTGCCCACCACCGCCACGGGCGGCTCAAGAAAGCTTTCTGCCTCTGGAGGGAAAGTGCCCAAGG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GCTCAGAACAGAGAGGACGGGCAGGGTGCGGGCAGCAGAATTCCACATGGCCCAGCTCCTGCGTTGGGCCTGGA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GCCAGTGGAGGGAGTGCCTGGCCCTGCGGGGAGCGGAGCGGCAGAAGCTGATGCGAGCAGACCTGCACCACCAG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CACAGCGTGCTGCACAGGGCGCTGCAGGCATGGGTGACTTACCAGGGCAGGGTGCGAAGCATCCTCCGGGAGGT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GGCAGCCAGGGAGAGCCAGCACAACAGGCAGCTGCTGCGCGGGGCATTACGTCGCTGGAAAGAGAACACCATGG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CCCGAGTGGATGAAGCCAAAAAAACCTTTCAAGCAAGTACTCATTACAGAAGGACCATATGTTCCAAGGTCCTG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GTCCAGTGGCGGGAAGCTGTGTCAGTGCAGATGTATTACCGACAGCAGGAGGACTGTGCCATCTGGGAGGCCCA  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GAAGGTGCTGGACAGGGGCTGTCTGCGGACCTGGTTTCAGCGCTGGTGGGACTGCAGCCGGAGGTCAGCCCAGC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  AGAGACTGCAGCTGGAGAGGGCAGTGCAACACCACCACCGGCAGCTGCTGCTGGAGGGGCTGGCCCGGTGGAAG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  ACGCACCATCTGCAGTGTGTCAGGAAGAGGCTCCTGCACAGGCAGAGCACCCAACTGCTGGCACAGAGACTCAG  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  CCGGACCTGCTTCCGCCAGTGGAGACAACAGCTGGCAGCCAGGAGGCAGGAGCAGCGGGCGACAGTGCGGGCCC  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TGTGGTTCTGGGCCTTCTCGCTGCAGGCAAAGGTGTGGGCCACGTGGCTGGCCTTTGTACTGGAAAGGAGGAGA  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  AAGAAGGCGCGGCTGCAGTGGGCGCTCCAGGCCTACCAGGGGCAGCTCCTCCAGGAGGGTGCCACGCGGCTCCT  2516

Query    1  -------------------ATGGCC---------------CAGGCCCACC-------CCA----GCTTAC----  25
                               |.||||               ||||||||.|       |||    |||.||    
Sbjct 2517  GCGCTTTGCAGCCAGCATGAAGGCCTCCCGGCAGCAGCTGCAGGCCCAGCAGCAGGTCCAGGCGGCTCACAGTC  2590

Query   26  --------------------------------------------TTGCTGACCTTG--------GCCTC-GCCT  46
                                                        .|||||..|..|        ||||| ||| 
Sbjct 2591  TCCATCGTGCCGTCCGCCGCTGTGCCACGCTCTGGAAACAGAAAGTGCTGGGCCGGGGCGGGAAGCCTCAGCC-  2663

Query   47  TTCCTGAC----------------------------TTTCA--GTCTCCCTATAAA----ATTG----------  76
              ||||.|                            |||.|  |||.||.|.|.||    ||||          
Sbjct 2664  --CCTGGCAGCCATCGCACCCAGCAGGAAAGTGACGTTTGAGGGTCCCCTTCTCAACCGCATTGCTGCTGGGGC  2735

Query   77  ----------------GAGATC------CCACAGAGATCTCAGACCCCCCT-GCAGCCCCTGGTCAGCC-----  122
                            ||||.|      ||||||...||||.|   ||.|| |.|| |.||||.|.|||     
Sbjct 2736  TGGGGATGGCACCCTTGAGACCAAGAGGCCACAGGCTTCTCGG---CCTCTGGGAG-CTCTGGGCCGCCTGGCT  2805

Query  123  -CAGGGGAACAGACCCCATGTTTCTTTCC----AG--CAACACTGCCCACTCAGCGAGGAAGCAGCCGCGACGC  189
             |.|.|||    .|||||.|       ||    ||  |||||||||||||||||||||||||||||||||||||
Sbjct 2806  GCTGAGGA----GCCCCACG-------CCCTGGAGCTCAACACTGCCCACTCAGCGAGGAAGCAGCCGCGACGC  2868

Query  190  CCACACTTCCTGTTGGAGCCTGCGCAGAGCCAGAGGCCTCAGAAGCCACAGGAACATGGCCTAGGCATGGCTCA  263
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2869  CCACACTTCCTGTTGGAGCCTGCGCAGAGCCAGAGGCCTCAGAAGCCACAGGAACATGGCCTAGGCATGGCTCA  2942

Query  264  GCCAGCAGCCCCCTCCCTGACGCGGCCCTTCCTGGCAGAGGCCCCGACAGCACTGGTCCCACACAGCCCCCTGC  337
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2943  GCCAGCAGCCCCCTCCCTGACGCGGCCCTTCCTGGCAGAGGCCCCGACAGCACTGGTCCCACACAGCCCCCTGC  3016

Query  338  CTGGGGCCCTGTCAAGCGCCCCTGGCCCGAAGCAGCCCCCGACGGCAAGCACAGGCCCGGAGCTGCTGCTGCTG  411
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3017  CTGGGGCCCTGTCAAGCGCCCCTGGCCCGAAGCAGCCCCCGACGGCAAGCACAGGCCCGGAGCTGCTGCTGCTG  3090

Query  412  CCTCTTTCCTCCTTCATGCCCTGCGGGGCGGCTGCACCAGCCAGGGTGTCAGCACAGCGGGCTACTCCTAGGGA  485
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3091  CCTCTTTCCTCCTTCATGCCCTGCGGGGCGGCTGCACCAGCCAGGGTGTCAGCACAGCGGGCTACTCCTAGGGA  3164

Query  486  TAAGCCCCCGGTCCCCTCATCCCTGGCCAGTGTCCCTGACCCCCATCTACTCCTTCCTGGGGACTTCTCAGCCA  559
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3165  TAAGCCCCCGGTCCCCTCATCCCTGGCCAGTGTCCCTGACCCCCATCTACTCCTTCCTGGGGACTTCTCAGCCA  3238

Query  560  CCAGGGCTGGGCCTGGACTTTCAACTGCAGGCAGCCTGGACCTTGAGGCTGAACTTGAGGAGATCCAGCAGCAA  633
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3239  CCAGGGCTGGGCCTGGACTTTCAACTGCAGGCAGCCTGGACCTTGAGGCTGAACTTGAGGAGATCCAGCAGCAA  3312

Query  634  CTACTGCACTACCAGACCACCAAGCAGAACCTCTGGTCCTGTCGGCGGCAAGCGAGCAGCCTGCGCAGGTGGCT  707
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3313  CTACTGCACTACCAGACCACCAAGCAGAACCTCTGGTCCTGTCGGCGGCAAGCGAGCAGCCTGCGCAGGTGGCT  3386

Query  708  GGAGCTGAACAGAGAGGAGCCGGGGCCTGAGGACCAGGAAGTAGAGCAGCAGGTGCAGAAAGAGCTGGAA----  777
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct 3387  GGAGCTGAACAGAGAGGAGCCGGGGCCTGAGGACCAGGAAGTAGAGCAGCAGGTGCAGAAAGAGCTGGAACAGG  3460

Query  778  --------------------------------------------------------------------------  777
                                                                                      
Sbjct 3461  TGAGGCCCCAGGCCATCCCCAGGTGTCCCTGGGGACGCCCCGGGCTGTGCTCCCTCTCAGCCCTGCCTGTCCCT  3534

Query  778  ---------CAGGTGGAAATGCAGATCCAGCTGCTGGCAGAGGAGCTCCAGGCTCAGCGCCAGCCCATTGGCGC  842
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3535  CCATGGCCCCAGGTGGAAATGCAGATCCAGCTGCTGGCAGAGGAGCTCCAGGCTCAGCGCCAGCCCATTGGCGC  3608

Query  843  CTGCGTTGCCCGCATCCAGGCCCTGCGGCAGGCCCTGTGC  882
            ||||||||||||||||||||||||||||||||||||||||
Sbjct 3609  CTGCGTTGCCCGCATCCAGGCCCTGCGGCAGGCCCTGTGC  3648

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