Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_15708
• Subject: NM_006001.3
• Aligned Length: 1353
• Identities: 859
• Gaps: 351

Alignment

Query    1  ATGCGTGAGTGCATCTCCATCCACGTTGGCCAGGCTGGTGTCCAGATTGGCAATGCCTGCTGGGAGCTCTACTG  74
            |||||||||||.|||||.||||||||.||.|||||.||.||||||||.|||||||||||||||||.||.|||||
Sbjct    1  ATGCGTGAGTGTATCTCTATCCACGTGGGGCAGGCAGGAGTCCAGATCGGCAATGCCTGCTGGGAACTGTACTG  74

Query   75  CCTGGAACACGGCATCCAGCCCGATGGCCAGATGCCAAGTGACAAGACCATTGGGGGAGGAGATGACTCCTTCA  148
            |||||||||.||.||.|||||||||||.||||||||||||||.||.||||||||.||.||.||.||||||||||
Sbjct   75  CCTGGAACATGGAATTCAGCCCGATGGTCAGATGCCAAGTGATAAAACCATTGGTGGTGGGGACGACTCCTTCA  148

Query  149  ACACCTTCTTCAGTGAGACGGGCGCTGGCAAGCACGTGCCCCGGGCTGTGTTTGTAGACTTGGAACCCACAGTC  222
            ||||.||||||||||||||.||.||||||||||||||||||.|.||.||||||||.|||.||||.|||||.||.
Sbjct  149  ACACGTTCTTCAGTGAGACTGGAGCTGGCAAGCACGTGCCCAGAGCAGTGTTTGTGGACCTGGAGCCCACTGTG  222

Query  223  ATTGATGAAGTTCGCACTGGCACCTACCGCCAGCTCTTCCACCCTGAGCAGCTCATCACAGGCAAGGAAGATGC  296
            .|.||||||||.|||||.||.|||||..|.||||||||||||||.||||||||.|||||.||.|||||||||||
Sbjct  223  GTCGATGAAGTGCGCACAGGAACCTATAGGCAGCTCTTCCACCCAGAGCAGCTGATCACCGGGAAGGAAGATGC  296

Query  297  TGCCAATAACTATGCCCGAGG-----------------------------------------------------  317
            .||||||||.||.|||.||||                                                     
Sbjct  297  GGCCAATAATTACGCCAGAGGCCATTACACCATCGGCAAGGAGATCGTCGACCTGGTCCTGGACCGGATCCGCA  370

Query  318  ---------------GCAC-------------------------------------------------------  321
                           ||||                                                       
Sbjct  371  AACTGGCGGATCTGTGCACGGGACTGCAGGGCTTCCTCATCTTCCACAGTTTTGGGGGTGGCACTGGCTCTGGG  444

Query  322  --------------------------------------------------------------------------  321
                                                                                      
Sbjct  445  TTCGCATCTCTGCTCATGGAGCGGCTCTCAGTGGATTACGGCAAGAAGTCCAAGCTAGAATTTGCCATTTACCC  518

Query  322  --------------------------------------------------------------------------  321
                                                                                      
Sbjct  519  AGCCCCCCAGGTCTCCACGGCCGTGGTGGAGCCCTACAACTCCATCCTGACCACCCACACGACCCTGGAACATT  592

Query  322  --------------------------------------------------------------------------  321
                                                                                      
Sbjct  593  CTGACTGTGCCTTCATGGTCGACAATGAAGCCATCTATGACATATGTCGGCGCAACCTGGACATCGAGCGTCCC  666

Query  322  ---TACACTAACCTTAACCGCCTTATTAGCCAGATTGTGTCCTCCATCACTGCTTCCCTGAGATTTGATGGAGC  392
               |||||.|||||.||.|||||.|||.|.|||||.||||||||||||||.||.||||||.|||||||.||.||
Sbjct  667  ACGTACACCAACCTCAATCGCCTGATTGGGCAGATCGTGTCCTCCATCACGGCCTCCCTGCGATTTGACGGGGC  740

Query  393  CCTGAATGTTGACCTGACAGAATTCCAGACCAACCTGGTGCCCTACCCCCGCATCCACTTCCCTCTGGCCACAT  466
            |||||||||.|||.||||.|||||||||||||||||.|||||.||||||||||||||||||||.||||||||.|
Sbjct  741  CCTGAATGTGGACTTGACGGAATTCCAGACCAACCTAGTGCCGTACCCCCGCATCCACTTCCCCCTGGCCACCT  814

Query  467  ATGCCCCTGTCATCTCTGCTGAGAAAGCCTACCATGAACAGCTTTCTGTAGCAGAGATCACCAATGCTTGCTTT  540
            |.|||||.||||||||.||.|||||.||||||||.||.|||||.||.||.||.||||||||||||||.|||||.
Sbjct  815  ACGCCCCGGTCATCTCAGCCGAGAAGGCCTACCACGAGCAGCTGTCCGTGGCTGAGATCACCAATGCCTGCTTC  888

Query  541  GAGCCAGCCAACCAGATGGTGAAATGTGACCCTCGCCATGGTAAATACATGGCTTGCTGCCTGTTGTACCGTGG  614
            |||||||||||.||||||||.||.||||||||||||||.||.||.||||||||.||||||.||||||||.|.||
Sbjct  889  GAGCCAGCCAATCAGATGGTCAAGTGTGACCCTCGCCACGGCAAGTACATGGCCTGCTGCATGTTGTACAGGGG  962

Query  615  TGACGTGGTTCCCAAAGATGTCAATGCTGCCATTGCCACCATCAAAACCAAGCGCAGCATCCAGTTTGTGGATT  688
            .||.|||||.||.|||||||||||.||.|||||.|||||||||||.||||||||||.||||||||||||.||||
Sbjct  963  GGATGTGGTCCCGAAAGATGTCAACGCGGCCATCGCCACCATCAAGACCAAGCGCACCATCCAGTTTGTAGATT  1036

Query  689  GGTGCCCCACTGGCTTCAAGGTTGGCATCAACTACCAGCCTCCCACTGTGGTGCCTGGTGGAGACCTGGCCAAG  762
            |||||||.|||||.||.|||||.|||||.|||||||||||.|||||.|||||.|||||.|||||||||||||||
Sbjct 1037  GGTGCCCAACTGGATTTAAGGTGGGCATTAACTACCAGCCCCCCACGGTGGTCCCTGGGGGAGACCTGGCCAAG  1110

Query  763  GTACAGAGAGCTGTGTGCATGCTGAGCAACACCACAGCCATTGCTGAGGCCTGGGCTCGCCTGGACCACAAGTT  836
            ||.|||.|.||||||||||||||||||||||||||.|||||.||.|||||||||||||||||||||||.|||||
Sbjct 1111  GTGCAGCGGGCTGTGTGCATGCTGAGCAACACCACGGCCATCGCGGAGGCCTGGGCTCGCCTGGACCATAAGTT  1184

Query  837  TGACCTGATGTATGCCAAGCGTGCCTTTGTTCACTGGTACGTGGGTGAGGGGATGGAGGAAGGCGAGTTTTCAG  910
            .||.||.||||||||||||||.||||||||.||||||||||||||.||.||.||||||||.||.|||||.||.|
Sbjct 1185  CGATCTCATGTATGCCAAGCGGGCCTTTGTGCACTGGTACGTGGGAGAAGGCATGGAGGAGGGGGAGTTCTCTG  1258

Query  911  AGGCCCGTGAAGATATGGCTGCCCTTGAGAAGGATTATGAGGAGGTTGGTGTGGATTCTGTTGAAGGAGAGGGT  984
            |||||||.||.||..||||.||.||.||||||||||||||.|||||.||.||||||||.||.||||..||||.|
Sbjct 1259  AGGCCCGCGAGGACCTGGCAGCTCTGGAGAAGGATTATGAAGAGGTGGGCGTGGATTCCGTGGAAGCCGAGGCT  1332

Query  985  GAGGAAGAAGGAGAGGAATAC  1005
               ||||||||.||.||||||
Sbjct 1333  ---GAAGAAGGTGAAGAATAC  1350