Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15784
- Subject:
- NM_053186.3
- Aligned Length:
- 2205
- Identities:
- 871
- Gaps:
- 1206
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGCGGCTGCTGCGGCTGTGGTGGGTTGGTTGGGCTGGGTGCTTGCCGCGTTCTGTCTGGGCAGCACCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGGGAGGCGGCGCCGGCGCCGGGCGCGGGACTGCTGAACTTCTGCACGGAAGAGGACAGCGCACCGGGCGCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCTCCCTGCGCGGAAGGGCAGCGCCAGAGGCCACTTTGTGCTTGCGACTCTTCTGCTCCGGCTTGGCCAACAGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCTGGACCTGGGTAGCCGCCGAGGGCGCAGGCTGCCCGGAGGGCGGACGGGCCACGGAGCCCGAGGAGGCGGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGCCCCGACGGGCGAGTGGCGCGCGCTGCTGCGCCTGCGCGCCGAGGCCGGCCACCCGCGCTCCGCGCTGCTGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGGTGCGCGTGGAGCCGGGTGGTGGGGCCGCGGAGGAGGCGGCGCCGCCCTGGGCGCTGGGGCTGGGGGCGGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGGCTGCTGGCCCTGGCGGCGGTGGCGCGCGGCCTGCAGCTGAGCGCGCTGGCGCTGGCGCCGGCCGAGGTGCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGTGCTGCGCGAGAGCGGCTCGGAGGCGGAGCGCGCGGCGGCGCGGCGCCTGGAACCCGCGCGGCGCTGGGCCG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCTGCGCCCTGGGCGCGCTGCTGCTTCTGGCCAGCCTGGCGCAGGCGGCACTGGCCGTGCTGCTGTACGGGGCG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCGGGCCAGCGCGCCGTGCCCGCCGTGCTGGGTTGCGCGGGGCTGGTGTTCCTGGTGGGTGAGGTGCTGCCGGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CGCCGTGAGCGGACGCTGGGCGCTGGCGCTGGCGCCGCGCGCGTTGGGCCTCAGCCGCCTGGCGGTGCTGCTCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCTTGCCCGTGGCGCTGCCGGTCGGGCAGCTGCTGGAGCTGGCAGCGCGGCCGGGGCGTCTGCGGGAGCGCGTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTGGAGCTGGCGCGCGGCGGCGGCGACCCCTACAGCGACCTCAGCAAGGGAGTGCTGCGCTCCCGGACCGTGGA 962
Query 1 -------------------------------ATGCTGGACGCCAGCACCGTGCTGGACTTCGGCGTCCTGGCCA 43
|||||||||.||.||||.||.||.||||||.|||||||.||||
Sbjct 963 GGACGTGCTCACGCCGCTCGAAGACTGCTTTATGCTGGACTCCGGCACTGTCCTAGACTTCAGCGTCCTCGCCA 1036
Query 44 GCATCATGCAGAGCGGCCACACGCGCATCCCGGTGTACGAGGAGGAGCGCTCCAACATCGTGGACATGCTCTAC 117
|||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GCATCATGCAGAGCGGCCACACGCGCATCCCAGTGTACGAGGAGGAGCGCTCCAACATCGTGGACATGCTCTAC 1110
Query 118 CTCAAGGACTTGGCCTTCGTGGATCCCGAAGACTGCACGCCGCTCAGCACCATCACTCGTTTCTACAACCATCC 191
|||||.||||||||..||||.||.|||||.||||||||.|||||||||||||||||.||.||||||||||||||
Sbjct 1111 CTCAAAGACTTGGCTATCGTTGAGCCCGAGGACTGCACACCGCTCAGCACCATCACCCGCTTCTACAACCATCC 1184
Query 192 GCTCCACTTCGTCTTCAACGACACCAAGCTGGACGCTGTCCTGGAGGAATTCAAGCGAGG-------------- 251
.||||||||.|||||||||||.|||||.||||||||||||||||||||.|||||||||||
Sbjct 1185 ACTCCACTTTGTCTTCAACGATACCAAACTGGACGCTGTCCTGGAGGAGTTCAAGCGAGGCAAGTCCCACCTGG 1258
Query 252 ---------AGA----------------------------------------------------CACCGTGGTG 264
||| ||||.|||.|
Sbjct 1259 CCATTGTGCAGAAGGTGAACAATGAGGGCGAGGGCGACCCCTTCTACGAGGTGCTGGGCCTGGTCACCCTGGAG 1332
Query 265 AA-------GAGG--------AAGCCTG----CTT------CTCTGATG------------------------- 288
.| |||| |||.||| ||| .|||||.|
Sbjct 1333 GACGTCATCGAGGAGATCATCAAGTCTGAGATCTTGGATGAGTCTGAAGACTACTCAGACACAAAGGTGAGGAA 1406
Query 289 -------------------GCCCCTCTGAAGCGGAAGGAGGAGTTCTCCTTGTTCAAGGTGTCTGATGATGAAT 343
||.|||||.|||||.||||||||.||||||||.||||||||||||||||||||||
Sbjct 1407 GAAGACCGTCGCCCTGGGAGCTCCTCTCAAGCGAAAGGAGGAATTCTCCTTATTCAAGGTGTCTGATGATGAAT 1480
Query 344 ATAAAGTAACAATCTCGCCTCAGCTGCTCTTGGCCACCCAGCGCTTCCTGTCCCGAGAAGTGGATGTATTCAGC 417
|||||||||.|||||||||||||||||||.|||||||||||||||||||.||||||||.||||||||.||||||
Sbjct 1481 ATAAAGTAAAAATCTCGCCTCAGCTGCTCCTGGCCACCCAGCGCTTCCTTTCCCGAGAGGTGGATGTGTTCAGC 1554
Query 418 CCGCTGCGCATCTCTGAGAAGGTCCTGCTGCACCTGTTGAAGCATCCCAGTGTCAACCAGGAAGTGAGGTTTGA 491
||..||||..||||||||||.|||.|||||||||||.|||||||||||||||||||||||||.||||.||||||
Sbjct 1555 CCATTGCGAGTCTCTGAGAAAGTCTTGCTGCACCTGCTGAAGCATCCCAGTGTCAACCAGGAGGTGACGTTTGA 1628
Query 492 CGAGAGCAACCGGCTGGCCACACACCACTACCTGTACCAGCGCAGCCAGCCGGTGGATTACTTCATTCTCATCC 565
||||||||||||.||||||.|||||||.||.||||||||||||||||||||.||.|||||||||||||||||.|
Sbjct 1629 CGAGAGCAACCGCCTGGCCGCACACCATTATCTGTACCAGCGCAGCCAGCCAGTAGATTACTTCATTCTCATTC 1702
Query 566 TGCAGGGCAGGGTTGAAGTGGAGATCGGGAAAGAGGGTCTGAAGTTTGAGAATGGGGCCTTCACGTACTATGGA 639
||||||||||.||.||.||.||.||.|||||||||||.||||||||.|||||.|||||||||||||||||||||
Sbjct 1703 TGCAGGGCAGAGTCGAGGTCGAAATTGGGAAAGAGGGCCTGAAGTTCGAGAACGGGGCCTTCACGTACTATGGA 1776
Query 640 GTGTCGGCCCTAACTGTGCCATCCTCGGTTCACCAGTCCCCGGTGTCCTCGCTCCAGCCCATCCGCCATGACCT 713
|||||.|||||.||.|..||||||||.|.||||||||||||.|||||.||.|.|||||.|||||||||||||.|
Sbjct 1777 GTGTCCGCCCTGACAGCCCCATCCTCAGCTCACCAGTCCCCAGTGTCTTCACGCCAGCTCATCCGCCATGACGT 1850
Query 714 GCAGCCCGACCCAGGTGACGGCACGCATTCATCTG--CGTATTGTCCCGACTACACCGTGAGGGCGCTCTCTGA 785
||||||.||.||||..||.||.||.|..|| ||| |.||.|||||.||||||||.||||||||.||.||.||
Sbjct 1851 GCAGCCTGAACCAGCCGATGGTACCCGCTC--CTGCACATACTGTCCTGACTACACTGTGAGGGCCCTTTCCGA 1922
Query 786 TCTGCAGCTCATCAAGGTTACGCGACTGCAGTACCTCAATGCACTCCTGGCTACCCGAGCCCAGAACCTGCCAC 859
.|||||||||||.|||||.||.||.|||||||||||.||||||||||||||||||||||||||.|.|.||||.|
Sbjct 1923 CCTGCAGCTCATTAAGGTCACACGGCTGCAGTACCTTAATGCACTCCTGGCTACCCGAGCCCAAAGCTTGCCTC 1996
Query 860 AGTCCCCTGAGAACACCGACCTGCAGGTTATTCCAGGCAGCCAGACCAGGCTCCTTGGTGAGAAGACCACCACA 933
..|||||.||||||.|.||.||.||||.|||.|||||||||||||||||||||||||||||.|||.||| .|.|
Sbjct 1997 CATCCCCAGAGAACGCTGAGCTCCAGGCTATCCCAGGCAGCCAGACCAGGCTCCTTGGTGACAAGTCCA-GAGA 2069
Query 934 G-CGGCAGGGTCCAGCCACAGCAGGCCCAGCCTTCCCCTTCTCCCCCGGGGCAGGGACAGTGCGGCATATTCAG 1006
| |.||||||||||.|.|||||||.||||||.| |||.|.|.|||
Sbjct 2070 GACAGCAGGGTCCACCAACAGCAGACCCAGCAT-----------CCCAGTGGAGG------------------- 2113
Query 1007 ATTCAGACCTCTTTGGGCTGAGCCACCTTGTGAGTGCAGTTACTGCCTTTGTGTGGCCG 1065
|||.|.| |||||.|| |||..| |||||
Sbjct 2114 ----AGAGCCC--TGGGCGGA---ACCCAG-GAGTG----------------------- 2139
