Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15875
- Subject:
- NM_023034.2
- Aligned Length:
- 4320
- Identities:
- 1915
- Gaps:
- 2394
Alignment
Query 1 ATGGATTTCTCTTTCTCTTTCATGCAAGGGATCATGGGAAACACAATTCAGCAACCACCTCAACTCATTGACTC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGATTTCTCTTTCTCTTTCATGCAAGGGATCATGGGAAACACAATTCAGCAACCACCTCAACTCATTGACTC 74
Query 75 CGCCAACATCCGTCAGGAGGATGCCTTTGATAACAACAGTGACATTGCTGAAGATGGTGGCCAGACACCATATG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CGCCAACATCCGTCAGGAGGATGCCTTTGATAACAACAGTGACATTGCTGAAGATGGTGGCCAGACACCATATG 148
Query 149 AAGCTACTTTGCAGCAAGGCTTTCAGTACCCAGCTACAACAGAAGATCTTCCTCCACTCACAAATGGGTATCCA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AAGCTACTTTGCAGCAAGGCTTTCAGTACCCAGCTACAACAGAAGATCTTCCTCCACTCACAAATGGGTATCCA 222
Query 223 TCATCAATCAGTGTGTATGAAACTCAAACCAAATACCAGTCATATAATCAGTATCCTAATGGGTCAGCCAATGG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TCATCAATCAGTGTGTATGAAACTCAAACCAAATACCAGTCATATAATCAGTATCCTAATGGGTCAGCCAATGG 296
Query 297 CTTTGGTGCAGTTAGAAACTTTAGCCCCACTGACTATTATCATTCAGAAATTCCAAACACAAGACCACATGAAA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTTTGGTGCAGTTAGAAACTTTAGCCCCACTGACTATTATCATTCAGAAATTCCAAACACAAGACCACATGAAA 370
Query 371 TTCTGGAAAAACCTTCCCCTCCACAGCCACCACCTCCTCCTTCGGTACCACAAACTGTGATTCCAAAGAAGACT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TTCTGGAAAAACCTTCCCCTCCACAGCCACCACCTCCTCCTTCGGTACCACAAACTGTGATTCCAAAGAAGACT 444
Query 445 GGCTCACCTGAAATTAAACTAAAAATAACCAAAACTATCCAGAATGGCAGGGAATTGTTTGAGTCTTCCCTTTG 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGCTCACCTGAAATTAAACTAAAAATAACCAAAACTATCCAGAATGGCAGGGAATTGTTTGAGTCTTCCCTTTG 518
Query 519 TGGAGACCTTTTAAATGAAGTACAGGCAAGTGAGCACACGAAATCAAAGCATGAAAGCAGAAAAGAAAAGAGGA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGGAGACCTTTTAAATGAAGTACAGGCAAGTGAGCACACGAAATCAAAGCATGAAAGCAGAAAAGAAAAGAGGA 592
Query 593 AAAAAAGCAACAAGCATGACTCATCAAGATCTGAAGAGCGCAAGTCACACAAAATCCCCAAATTAGAACCAGAG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AAAAAAGCAACAAGCATGACTCATCAAGATCTGAAGAGCGCAAGTCACACAAAATCCCCAAATTAGAACCAGAG 666
Query 667 GAACAAAATAGACCAAATGAGAGGGTTGACACTGTATCAGAAAAACCAAGGGAAGAACCAGTACTAAAAGAGGA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAACAAAATAGACCAAATGAGAGGGTTGACACTGTATCAGAAAAACCAAGGGAAGAACCAGTACTAAAAGAGGA 740
Query 741 AGCCCCAGTTCAGCCAATACTATCTTCTGTTCCAACAACGGAAGTGTCCACTGGTGTTAAGTTTCAGGTTGGCG 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGCCCCAGTTCAGCCAATACTATCTTCTGTTCCAACAACGGAAGTGTCCACTGGTGTTAAGTTTCAGGTTGGCG 814
Query 815 ATCTTGTGTGGTCCAAGGTGGGAACCTATCCTTGGTGGCCTTGTATGGTTTCAAGTGATCCCCAGCTTGAGGTT 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ATCTTGTGTGGTCCAAGGTGGGAACCTATCCTTGGTGGCCTTGTATGGTTTCAAGTGATCCCCAGCTTGAGGTT 888
Query 889 CATACTAAAATTAACACAAGAGGTGCCCGAGAATATCATGTCCAGTTTTTTAGCAACCAGCCAGAGAGGGCGTG 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CATACTAAAATTAACACAAGAGGTGCCCGAGAATATCATGTCCAGTTTTTTAGCAACCAGCCAGAGAGGGCGTG 962
Query 963 GGTTCATGAAAAACGGGTACGAGAGTATAAAGGTCATAAACAGTATGAAGAATTACTGGCTGAGGCAACCAAAC 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGTTCATGAAAAACGGGTACGAGAGTATAAAGGTCATAAACAGTATGAAGAATTACTGGCTGAGGCAACCAAAC 1036
Query 1037 AAGCCAGCAATCACTCTGAGAAACAAAAGATTCGGAAACCCCGACCTCAGAGAGAACGTGCTCAGTGGGATATT 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AAGCCAGCAATCACTCTGAGAAACAAAAGATTCGGAAACCCCGACCTCAGAGAGAACGTGCTCAGTGGGATATT 1110
Query 1111 GGCATTGCCCATGCAGAGAAAGCATTGAAAATGACTCGAGAAGAAAGAATAGAACAGTATACTTTTATTTACAT 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GGCATTGCCCATGCAGAGAAAGCATTGAAAATGACTCGAGAAGAAAGAATAGAACAGTATACTTTTATTTACAT 1184
Query 1185 TGATAAACAGCCTGAAGAGGCTTTATCCCAAGCAAAAAAGAGTGTTGCCTCCAAAACCGAAGTTAAAAAAACCC 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TGATAAACAGCCTGAAGAGGCTTTATCCCAAGCAAAAAAGAGTGTTGCCTCCAAAACCGAAGTTAAAAAAACCC 1258
Query 1259 GACGACCAAGATCTGTGCTGAATACTCAGCCAGAACAGACCAATGCAGGGGAGGTGGCCTCCTCACTCTCAAGT 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GACGACCAAGATCTGTGCTGAATACTCAGCCAGAACAGACCAATGCAGGGGAGGTGGCCTCCTCACTCTCAAGT 1332
Query 1333 ACTGAAATTCGGAGACATAGCCAGAGGCGGCACACAAGTGCGGAAGAGGAAGAGCCACCGCCTGTTAAAATAGC 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ACTGAAATTCGGAGACATAGCCAGAGGCGGCACACAAGTGCGGAAGAGGAAGAGCCACCGCCTGTTAAAATAGC 1406
Query 1407 CTGGAAAACTGCGGCAGCAAGGAAATCCTTACCAGCTTCCATTACGATGCACAAAGGGAGCCTGGATTTGCAGA 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CTGGAAAACTGCGGCAGCAAGGAAATCCTTACCAGCTTCCATTACGATGCACAAAGGGAGCCTGGATTTGCAGA 1480
Query 1481 AGTGTAACATGTCTCCAGTTGTGAAAATTGAACAAGTGTTTGCTCTTCAGAATGCTACAGGGGATGGGAAATTT 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AGTGTAACATGTCTCCAGTTGTGAAAATTGAACAAGTGTTTGCTCTTCAGAATGCTACAGGGGATGGGAAATTT 1554
Query 1555 ATCGATCAATTTGTTTATTCAACAAAGGGAATTGGTAACAAAACAGAAATAAGTGTCAGGGGGCAAGACAGGCT 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 ATCGATCAATTTGTTTATTCAACAAAGGGAATTGGTAACAAAACAGAAATAAGTGTCAGGGGGCAAGACAGGCT 1628
Query 1629 TATAATTTCTACACCAAACCAGAGAAATGAAAAGCCAACGCAGAGTGTATCATCTCCTGAAGCAACATCTGGTT 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 TATAATTTCTACACCAAACCAGAGAAATGAAAAGCCAACGCAGAGTGTATCATCTCCTGAAGCAACATCTGGTT 1702
Query 1703 CTACAGGCTCAGTAGAAAAGAAGCAACAGAGAAGATCAATTAGAACTCGTTCTGAATCAGAGAAATCCACTGAG 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 CTACAGGCTCAGTAGAAAAGAAGCAACAGAGAAGATCAATTAGAACTCGTTCTGAATCAGAGAAATCCACTGAG 1776
Query 1777 GTTGTGCCAAAGAAGAAGATCAAAAAGGAGCAGGTTGAAACAGTTCCTCAGGCTACAGTGAAGACTGGATTACA 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GTTGTGCCAAAGAAGAAGATCAAAAAGGAGCAGGTTGAAACAGTTCCTCAGGCTACAGTGAAGACTGGATTACA 1850
Query 1851 GAAAGG-GTCGGCG-GA---------CCGG-----------------GGAGT-GCAGGGCT---CTG------- 1885
|||||| |.|.||| || ||.| ||||| || |.|| |||
Sbjct 1851 GAAAGGTGCCAGCGAGATTTCAGATTCCTGTAAACCTCTAAAGAAAAGGAGTCGC--GCCTCAACTGATGTAGA 1922
Query 1886 ----------TCAG-ATTCAGTGACAGCTCCGTCTCCGCAGCGATT---GAGGAAACTGTG-GAC--------- 1935
|||| ||.|||.||||..||.|.||| ||||| |||| ||||.| |||
Sbjct 1923 AATGACTAGTTCAGCATACAGAGACACATCTGACTC-----CGATTCTAGAGG--ACTGAGTGACCTGCAGGTA 1989
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 1990 GGCTTTGGAAAGCAAGTAGATAGCCCTTCAGCTACTGCAGATGCAGACGTTTCTGATGTGCAGTCCATGGATTC 2063
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 2064 AAGTTTGTCGAGAAGAGGCACTGGAATGAGTAAGAAGGACACTGTATGTCAGATTTGTGAAAGCTCTGGTGACT 2137
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 2138 CTCTGATTCCTTGTGAGGGAGAGTGCTGCAAACACTTTCACCTGGAGTGCCTGGGATTGGCATCACTTCCTGAT 2211
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 2212 AGCAAGTTCATCTGCATGGAATGTAAAACTGGGCAGCACCCATGTTTTTCGTGTAAAGTGTCTGGTAAAGATGT 2285
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 2286 GAAGCGTTGTTCTGTTGGTGCTTGTGGGAAATTTTATCATGAAGCCTGTGTCCGCAAATTCCCCACTGCCATCT 2359
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 2360 TTGAATCAAAAGGATTCCGCTGTCCTCAGCACTGCTGCTCTGCCTGCTCTATGGAGAAAGATATCCACAAAGCA 2433
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 2434 AGTAAAGGCCGCATGATGAGATGTTTAAGATGTCCAGTTGCCTATCACTCTGGAGATGCTTGCATTGCGGCCGG 2507
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 2508 AAGCATGTTAGTATCCTCCTACATTCTCATCTGTAGTAATCATTCCAAACGGAGCAGTAATTCTTCTGCTGTAA 2581
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 2582 ATGTAGGCTTTTGTTTCGTTTGTGCCAGAGGGCTGATAGTTCAGGACCATTCAGACCCCATGTTCAGTTCATAT 2655
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 2656 GCCTATAAGTCCCACTACCTACTGAATGAATCAAATCGTGCTGAGTTGATGAAATTACCTATGATTCCTTCTTC 2729
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 2730 GTCAGCTTCCAAAAAGAAATGTGAGAAAGGTGGAAGATTGCTCTGCTGTGAATCGTGCCCAGCTTCCTTCCACC 2803
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 2804 CGGAATGCCTAAGCATAGAAATGCCAGAAGGCTGCTGGAATTGTAATGACTGTAAAGCTGGCAAGAAACTACAT 2877
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 2878 TACAAGCAGATTGTTTGGGTCAAATTGGGAAATTACAGATGGTGGCCAGCAGAGATCTGCAACCCCAGGTCTGT 2951
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 2952 GCCACTGAACATCCAGGGCCTTAAACATGACTTGGGGGACTTCCCTGTATTCTTCTTTGGTTCTCATGACTACT 3025
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 3026 ACTGGGTACACCAGGGCAGAGTGTTCCCTTATGTTGAAGGAGACAAAAGCTTTGCTGAAGGGCAGACTAGTATT 3099
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 3100 AACAAGACCTTCAAAAAGGCACTGGAAGAAGCTGCAAAACGTTTCCAGGAATTGAAAGCACAAAGAGAAAGTAA 3173
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 3174 AGAAGCCCTAGAGATTGAAAAAAACTCAAGAAAACCCCCTCCCTACAAACACATCAAAGCTAACAAAGTAATAG 3247
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 3248 GAAAGGTGCAGATCCAGGTTGCTGACCTGTCAGAGATTCCCCGCTGTAACTGCAAGCCAGCTGATGAAAACCCT 3321
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 3322 TGTGGCTTGGAATCGGAGTGCCTGAACAGAATGTTGCAGTATGAATGCCACCCGCAGGTGTGCCCAGCTGGAGA 3395
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 3396 TCGTTGTCAGAACCAGTGCTTTACAAAGAGACTATACCCTGATGCAGAGATCATCAAAACGGAGCGGAGAGGCT 3469
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 3470 GGGGCCTCAGGACCAAAAGGAGCATTAAGAAGGGTGAATTTGTAAATGAATACGTCGGTGAATTAATTGATGAA 3543
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 3544 GAAGAATGCAGATTGCGAATCAAGCGAGCCCACGAGAACAGTGTAACTAATTTTTATATGTTAACTGTTACCAA 3617
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 3618 GGACCGTATAATTGATGCCGGCCCAAAAGGAAATTATTCTCGCTTCATGAACCACAGTTGTAATCCCAACTGTG 3691
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 3692 AAACACAAAAGTGGACAGTGAATGGAGATGTTCGAGTGGGACTATTTGCTCTCTGTGATATTCCTGCAGGGATG 3765
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 3766 GAGTTAACATTTAATTATAACCTAGATTGTCTGGGCAACGGCAGAACGGAGTGCCACTGTGGAGCAGATAACTG 3839
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 3840 CAGTGGTTTTCTAGGAGTGCGGCCAAAGTCGGCATGTGCGTCAACAAATGAAGAGAAGGCAAAAAATGCTAAGT 3913
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 3914 TAAAACAGAAGAGACGAAAGATCAAAACAGAACCAAAGCAGATGCATGAAGATTACTGTTTTCAATGTGGAGAT 3987
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 3988 GGTGGAGAGCTGGTCATGTGTGACAAAAAAGACTGTCCCAAAGCATACCACCTCCTATGCCTTAACCTGACTCA 4061
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 4062 GCCACCATATGGAAAGTGGGAGTGTCCGTGGCATCAGTGCGATGAGTGCAGCAGTGCAGCTGTTTCCTTCTGTG 4135
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 4136 AATTCTGTCCACATTCATTTTGTAAAGATCATGAAAAGGGGGCCCTGGTTCCCTCTGCACTGGAAGGCCGCCTC 4209
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 4210 TGCTGCTCGGAACATGACCCCATGGCTCCTGTGTCACCAGAATACTGGAGCAAGATAAAATGTAAATGGGAATC 4283
Query 1936 ---------------------------- 1935
Sbjct 4284 ACAAGATCATGGAGAAGAAGTAAAAGAA 4311
