Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_15888
Subject:
XM_017316147.1
Aligned Length:
5094
Identities:
854
Gaps:
4176

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGGAGATTGGCTTTTCGAGGCGCTGGTTGTGCTCTGGTAAAGCTGAAGAAGTTGGATTCCATGGGTTCCAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GAGAAGAAGAGCCACCTCTCCTTCCAGCAGTGTCAGTGGAGACTTTGATGACGGGCACCATTCTGTGCCTACAC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGGCCCAAGCAGGAAAAGGAGAAGACTGTCCAATCTTCCAACTGTAGATCCTATTGCTGTGTGCCATGAACTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TATAACACCATCCGAGACTATAAGGATGAACAGGGCAGACTCCTCTGTGAGCTGTTCATTAGGGCTCCAAAGCG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GAGAAATCAACCAGACTATTATGAAGTGGTTTCTCAGCCCATTGACTTGATGAAAATCCAACAGAAACTTAAAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGGAAGAGTATGATGATGTTAATCTACTGACTGCTGACTTCCAGCTGCTTTTTAACAATGCAAAGGCCTACTAT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AAGCCAGATTCCCCTGAGTATAAAGCTGCTTGTAAACTCTGGGATTTGTACCTTCGAACAAGAAATGAGTTTGT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCAGAAAGGAGAAGCAGACGATGAAGATGATGACGAAGATGGGCAAGACAATCAAGGCACACTGGCTGACGGCT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CTTCTCCAGGTTATCTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCCACAAATCCATCAGGA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CGGCTCATCAGTGAACTTTTTCAGAAACTGCCTTCCAAAGTGCAATATCCAGACTATTATGCAATAATTAAGGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ACCTATAGATCTCAAGACCATTGCTCAGAGGATACAGAATGGAAGCTACAAAAGTATACACGCAATGGCCAAAG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ATATAGATCTTCTAGCAAAAAATGCCAAAACATACAATGAGCCTGGGTCTCAAGTATTCAAGGATGCCAATTCG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ATTAAAAAAATATTTTATATGAAAAAGGCAGAAATTGAACATCATGAAATGACTAAATCAAGTCTTCGAATAAG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TAATAAAAGAGCAGTCCAAGGGGGTCGCTTGTCAGCAATTACCATGGCACTTCAGTATGGATCAGAGAGTGAAG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AGGACGCTGCTTTAGCTGCTGCACGCTATGAAGAAGGGGAATCTGAAGCAGAGAGCATCACTTCCTTCATGGAC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GTTTCCAACCCCTTTCATCAGCTTTACGACACAGTTAGGAGCTGTAGGAATCACCAAGGGCAGCTCATAGCTGA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  ACCTTTCTTCCATTTGCCTTCAAAGAAAAAATACCCAGATTATTATCAGCAAATTAAAATGCCCATATCACTTC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AACAGATCAGAACAAAGCTAAAGAACCAAGAATATGAAACTTTAGATCATTTGGAGTGTGATCTGAATTTAATG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TTTGAAAATGCCAAACGTTATAACGTTCCCAATTCAGCCATCTATAAGCGAGTTCTAAAACTGCAGCAAGTCAT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GCAGGCAAAGAAGAAGGAGCTTGCGAGGAGAGATGACATTGAGGACGGAGACAGCATGATCTCCTCAGCCACTT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CTGACACTGGTAGTGCCAAAAGGAAAAGGAATACTCATGACAGTGAGATGTTGGGTCTCAGGAGGCTATCCAGT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AAAAAGAACATAAGAAAACAGCGAATGAAAATTTTATTCAATGTTGTTCTTGAAGCTCGAGAGCCAGGTTCAGG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CAGAAGACTTTGCGATCTATTTATGGTTAAGCCATCCAAGAAGGACTATCCTGATTATTATAAAATCATCTTAG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  AGCCAATGGACCTGAAAATAATTGAGCATAACATCCGAAATGACAAATATGCAGGTGAAGAAGGAATGATGGAA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GACATGAAACTCATGTTCCGCAATGCCAGGCACTACAATGAGGAGGGCTCCCAGGTATACAATGATGCCCATAT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CCTGGAGAAGTTACTCAAAGATAAAAGGAAAGAGCTGGGCCCTCTGCCTGATGATGATGACATGGCTTCTCCCA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  AACTTAAATTGAGTAGGAAGAGTGGTGTTTCTCCTAAGAAATCAAAGTACATGACTCCAATGCAGCAGAAACTG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  AATGAAGTGTATGAAGCTGTAAAGAACTATACTGATAAGAGGGGTCGCCGCCTTAGTGCTATATTTCTAAGACT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CCCCTCTAGATCAGAGCTGCCTGACTACTACCTGACCATTAAAAAGCCCATGGACATGGAAAAAATTCGAAGTC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  ACATGATGGCAAACAAGTACCAAGACATAGATTCTATGGTAGAGGACTTTGTCATGATGTTTAATAATGCCTGT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  ACCTACAATGAACCAGAGTCTTTGATCTACAAAGATGCCCTTGTACTGCATAAAGTCCTCCTTGAGACTCGGAG  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  AGACCTGGAGGGAGATGAGGATTCTCATGTCCCTAATGTGACGTTGCTGATTCAAGAGCTCATCCATAACCTTT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TTGTGTCAGTCATGAGTCATCAGGATGACGAAGGGAGGTGTTACAGCGACTCCTTAGCAGAAATTCCTGCTGTG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GATCCCAACTCTCCCAATAAACCTCCCCTTACATTTGACATTATCAGGAAAAATGTTGAAAGTAATCGGTATCG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  GCGACTTGATTTATTTCAGGAGCATATGTTTGAAGTATTGGAACGGGCAAGAAGGATGAACCGGACAGATTCCG  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  AAATATATGAGGATGCTGTAGAACTTCAGCAGTTTTTTATTAGAATTCGTGATGAACTCTGCAAAAATGGAGAG  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  ATCCTTCTTTCTCCAGCACTCAGCTATACCACAAAACACTTGCATAACGATGTGGAAAAAGAAAAAAAGGAAAA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  ATTGCCTAAAGAAATAGAGGAAGATAAACTAAAACGCGAAGAAGAAAAAAGAGAAGCTGAAAAAAGTGAAGATT  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  CCTCAGGTACTACAGGCCTCTCAGGCTTACATCGTACATACAGCCAGGACTGCAGCTTTAAGAACAGCATGTAT  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  CATGTCGGAGATTATGTCTATGTTGAACCTGCGGAGGCCAATCTACAACCACATATAGTGTGTATTGAGAGACT  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  GTGGGAGGATTCAGCTGGTGAAAAATGGTTGTACGGCTGTTGGTTTTATCGGCCAAATGAAACATTCCATTTGG  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  CTACACGAAAATTTCTAGAAAAAGAAGTTTTTAAGAGTGACTACTACAATAAAGTACCTGTTAGTAAAATTCTA  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  GGCAAATGTGTAGTCATGTTTGTCAAGGAATACTTTAAATTATGTCCAGAAAACTTTCGCGATGAGGATGTTTT  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  TGTCTGTGAATCGAGGTATTCTGCCAAAACCAAATCTTTTAAGAAAATTAAACTGTGGACCATGCCCATCAGTT  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  CAGTTAGATTTGTCCCTCGGGATGTGCCTTTGCCTGTGGTCCGAGTGGCCTCTGTGTTTGCAAATGCAGATAAA  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  GGGGATGATGAGAAGAATACAGACAACTCAGATGACAATAGAGCTGAAGACAATTTTAACTTGGAAAAGGAAAA  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  AGAAGATGTTCCTGTGGAGATGTCCAATGGTGAGCCAGGTTGCCACTACTTTGAGCAGCTTCGGTACAATGACA  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  TGTGGCTGAAGGTTGGTGATTGTGTCTTCATCAAATCCCACGGCTTGGTGCGCCCTCGTGTGGGCAGAATTGAG  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  AAAGTATGGGTCCGAGATGGAGCTGCATATTTTTATGGCCCTATCTTCATTCATCCAGAAGAAACAGAACATGA  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  GCCCACAAAAATGTTCTACAAAAAAGAAGTGTTTCTGAGTAATCTGGAAGAGACCTGCCCTATGAGTTGTATTC  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  TGGGGAAATGTGCAGTGCTGTCATTCAAGGACTTCCTCTCCTGCAGGCCAACTGAAATACCAGAAAATGACATT  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  CTGCTTTGTGAGAGCCGCTATAATGAGAGTGACAAGCAGATGAAGAAGTTCAAGGGTTTGAAGAGGTTTTCACT  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  CTCTGCTAAAGTTGTAGATGATGAAATCTACTACTTCAGAAAACCAATCATTCCTCAGAAGGAACCCTCACCTT  3922

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3923  TGTTAGAAAAGAAGATACAATTGCTAGAAGCTAAATTTGCAGAGTTAGAAGGAGGAGATGATGATATTGAGGAG  3996

Query    1  ATGGGAGAAGAAGATAGTGAGGTCATTGAACCTCCTTCTCTACCTCAGCTTCAGACCCCCCTGGCCAGTGAGCT  74
            |||||||||||.||||||||.|||||||||.||||.|||||||||||.||.|||||.||||||||||.||||.|
Sbjct 3997  ATGGGAGAAGAGGATAGTGAAGTCATTGAAGCTCCATCTCTACCTCAACTGCAGACACCCCTGGCCAATGAGTT  4070

Query   75  GGACCTCATGCCCTACACACCCCC---------------ACAGTCTACCCCAAAGTCTGCCAAAGGCAGTGCAA  133
            |||||||||||||||.||||||||               |||||||||||||||||||||||||||||||||||
Sbjct 4071  GGACCTCATGCCCTATACACCCCCACAGCTTTCTGTCTTACAGTCTACCCCAAAGTCTGCCAAAGGCAGTGCAA  4144

Query  134  AGAAGGAAGGCTCCAAACGGAAAATCAACATGAGTGGCTACATCCTGTTCAGCAGTGAGATGAGGGCTGTGATT  207
            ||||||||.|.||.|||||.|||||||||||||||||||||||..|||||||||||||.|||||.|||||||||
Sbjct 4145  AGAAGGAAAGTTCTAAACGAAAAATCAACATGAGTGGCTACATTTTGTTCAGCAGTGAAATGAGAGCTGTGATT  4218

Query  208  AAGGCCCAACACCCAGACTACTCTTTCGGGGAGCTCAGCCGCCTGGTGGGGACAGAATGGAGAAATCTTGAGAC  281
            ||.|||||.|||||||||||||||||.||||||||||||.|.|||||||||||||||||||||||.|||||.||
Sbjct 4219  AAAGCCCAGCACCCAGACTACTCTTTTGGGGAGCTCAGCAGACTGGTGGGGACAGAATGGAGAAACCTTGAAAC  4292

Query  282  AGCCAAGAAAGCAGAATATGA-----------------------------------------------------  302
            |||||||||||||||||||||                                                     
Sbjct 4293  AGCCAAGAAAGCAGAATATGAAGAGCGGGCAGCTAAAGTTGCTGAGCAGCAGGAGAGAGAGCGAGCAGCACAGC  4366

Query  303  --------------------------------------------------------------------------  302
                                                                                      
Sbjct 4367  AACAGCAGCCGAGTGCTTCTCCCCGAGCAGGCACCCCTGTGGGGGCTCTCATGGGGGTGGTGCCACCACCAACA  4440

Query  303  --------------------------------------AGGCATGATGGGTGGCTATCCGCCAGGCCTTCCACC  338
                                                  ||||||||||||||||||||||||||||||||||||
Sbjct 4441  CCAATGGGGATGCTCAATCAGCAGTTGACACCTGTTGCAGGCATGATGGGTGGCTATCCGCCAGGCCTTCCACC  4514

Query  339  TTTGCAGGGCCCAGTTGATGGCCTTGTTAGCATGGGCAGCATGCAGCCACTTCACCCTGGGGGGCCTCCACCCC  412
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 4515  TTTGCAGGGCCCAGTTGATGGCCTTGTTAGCATGGGCAGCATGCAGCCACTTCACCCTGGGGGGCCTCCACCTC  4588

Query  413  ACCATCTTCCGCCAGGTGTGCCTGGCCTCCCGGGCATCCCACCACCGGGTGTGATGAACCAAGGAGTGGCCCCT  486
            |||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.||||||||.|||||.
Sbjct 4589  ACCATCTTCCGCCAGGTGTGCCTGGCCTCCCAGGCATCCCACCACCGGGTGTGATGAATCAAGGAGTAGCCCCC  4662

Query  487  ATGGTAGGGACTCCAGCACCAGGTGGAAGTCCATATGGACAACAGGTGGGAGTTTTGGGGCCTCCAGGGCAGCA  560
            ||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||.||||||||||||||
Sbjct 4663  ATGGTAGGGACTCCAGCACCAGGTGGAAGTCCGTATGGACAACAGGTAGGAGTTTTGGGACCTCCAGGGCAGCA  4736

Query  561  GGCACCACCTCCATATCCCGGCCCACATCCAGCTGGACCCCCTGTCATACAGCAGCCAACAACACCCATGTTTG  634
            ||||||||||||||||||.||.||.|||||||||||.||||||||||||||||||||||||||.||||||||||
Sbjct 4737  GGCACCACCTCCATATCCTGGTCCTCATCCAGCTGGCCCCCCTGTCATACAGCAGCCAACAACGCCCATGTTTG  4810

Query  635  TAGCTCCCCCACCAAAGACCCAGCGGCTTCTTCACTCAGAGGCCTACCTGAAATACATTGAAGGACTCAGTGCG  708
            |.||||||||||||||||||||..|||||||.|||||||||||||||||||||||||||||||||||||||||.
Sbjct 4811  TGGCTCCCCCACCAAAGACCCAAAGGCTTCTCCACTCAGAGGCCTACCTGAAATACATTGAAGGACTCAGTGCT  4884

Query  709  GAGTCCAACAGCATTAGCAAGTGGGATCAGACACTGGCAGCTCGAAGACGCGACGTCCATTTGTCGAAAGAACA  782
            ||.|||||||||||||||||||||||.||.||..||||||||||||||||.||.|||||||||||.||||||||
Sbjct 4885  GAATCCAACAGCATTAGCAAGTGGGACCAAACTTTGGCAGCTCGAAGACGGGATGTCCATTTGTCCAAAGAACA  4958

Query  783  GGAGAGCCGCCTACCCTCTCACTGGCTGAAAAGCAAAGGGGCCCACACCACCATGGCAGATGCCCTCTGGCGCC  856
            |||||||||||||||.|||||||||||.|||||.||||||||.|||||||||||||||||||||||||||||||
Sbjct 4959  GGAGAGCCGCCTACCTTCTCACTGGCTCAAAAGTAAAGGGGCACACACCACCATGGCAGATGCCCTCTGGCGCC  5032

Query  857  TTCGAGATTTGATGCTCCGGGACACCCTCAACATTCGCCAAGCATACAACCTAGAAAATGTT  918
            |.||.|||||.|||||.||.|||||.||||||||.||.||.|||||||||||||||||||||
Sbjct 5033  TACGGGATTTAATGCTTCGAGACACTCTCAACATCCGACAGGCATACAACCTAGAAAATGTT  5094

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