Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15888
- Subject:
- XM_017316147.1
- Aligned Length:
- 5094
- Identities:
- 854
- Gaps:
- 4176
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGGAGATTGGCTTTTCGAGGCGCTGGTTGTGCTCTGGTAAAGCTGAAGAAGTTGGATTCCATGGGTTCCAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGAAGAAGAGCCACCTCTCCTTCCAGCAGTGTCAGTGGAGACTTTGATGACGGGCACCATTCTGTGCCTACAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGGCCCAAGCAGGAAAAGGAGAAGACTGTCCAATCTTCCAACTGTAGATCCTATTGCTGTGTGCCATGAACTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TATAACACCATCCGAGACTATAAGGATGAACAGGGCAGACTCCTCTGTGAGCTGTTCATTAGGGCTCCAAAGCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAGAAATCAACCAGACTATTATGAAGTGGTTTCTCAGCCCATTGACTTGATGAAAATCCAACAGAAACTTAAAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGAAGAGTATGATGATGTTAATCTACTGACTGCTGACTTCCAGCTGCTTTTTAACAATGCAAAGGCCTACTAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGCCAGATTCCCCTGAGTATAAAGCTGCTTGTAAACTCTGGGATTTGTACCTTCGAACAAGAAATGAGTTTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCAGAAAGGAGAAGCAGACGATGAAGATGATGACGAAGATGGGCAAGACAATCAAGGCACACTGGCTGACGGCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTTCTCCAGGTTATCTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCCACAAATCCATCAGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CGGCTCATCAGTGAACTTTTTCAGAAACTGCCTTCCAAAGTGCAATATCCAGACTATTATGCAATAATTAAGGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACCTATAGATCTCAAGACCATTGCTCAGAGGATACAGAATGGAAGCTACAAAAGTATACACGCAATGGCCAAAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATATAGATCTTCTAGCAAAAAATGCCAAAACATACAATGAGCCTGGGTCTCAAGTATTCAAGGATGCCAATTCG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATTAAAAAAATATTTTATATGAAAAAGGCAGAAATTGAACATCATGAAATGACTAAATCAAGTCTTCGAATAAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TAATAAAAGAGCAGTCCAAGGGGGTCGCTTGTCAGCAATTACCATGGCACTTCAGTATGGATCAGAGAGTGAAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGGACGCTGCTTTAGCTGCTGCACGCTATGAAGAAGGGGAATCTGAAGCAGAGAGCATCACTTCCTTCATGGAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTTTCCAACCCCTTTCATCAGCTTTACGACACAGTTAGGAGCTGTAGGAATCACCAAGGGCAGCTCATAGCTGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACCTTTCTTCCATTTGCCTTCAAAGAAAAAATACCCAGATTATTATCAGCAAATTAAAATGCCCATATCACTTC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AACAGATCAGAACAAAGCTAAAGAACCAAGAATATGAAACTTTAGATCATTTGGAGTGTGATCTGAATTTAATG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTTGAAAATGCCAAACGTTATAACGTTCCCAATTCAGCCATCTATAAGCGAGTTCTAAAACTGCAGCAAGTCAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCAGGCAAAGAAGAAGGAGCTTGCGAGGAGAGATGACATTGAGGACGGAGACAGCATGATCTCCTCAGCCACTT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTGACACTGGTAGTGCCAAAAGGAAAAGGAATACTCATGACAGTGAGATGTTGGGTCTCAGGAGGCTATCCAGT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AAAAAGAACATAAGAAAACAGCGAATGAAAATTTTATTCAATGTTGTTCTTGAAGCTCGAGAGCCAGGTTCAGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CAGAAGACTTTGCGATCTATTTATGGTTAAGCCATCCAAGAAGGACTATCCTGATTATTATAAAATCATCTTAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGCCAATGGACCTGAAAATAATTGAGCATAACATCCGAAATGACAAATATGCAGGTGAAGAAGGAATGATGGAA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GACATGAAACTCATGTTCCGCAATGCCAGGCACTACAATGAGGAGGGCTCCCAGGTATACAATGATGCCCATAT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCTGGAGAAGTTACTCAAAGATAAAAGGAAAGAGCTGGGCCCTCTGCCTGATGATGATGACATGGCTTCTCCCA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AACTTAAATTGAGTAGGAAGAGTGGTGTTTCTCCTAAGAAATCAAAGTACATGACTCCAATGCAGCAGAAACTG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AATGAAGTGTATGAAGCTGTAAAGAACTATACTGATAAGAGGGGTCGCCGCCTTAGTGCTATATTTCTAAGACT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CCCCTCTAGATCAGAGCTGCCTGACTACTACCTGACCATTAAAAAGCCCATGGACATGGAAAAAATTCGAAGTC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ACATGATGGCAAACAAGTACCAAGACATAGATTCTATGGTAGAGGACTTTGTCATGATGTTTAATAATGCCTGT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ACCTACAATGAACCAGAGTCTTTGATCTACAAAGATGCCCTTGTACTGCATAAAGTCCTCCTTGAGACTCGGAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGACCTGGAGGGAGATGAGGATTCTCATGTCCCTAATGTGACGTTGCTGATTCAAGAGCTCATCCATAACCTTT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TTGTGTCAGTCATGAGTCATCAGGATGACGAAGGGAGGTGTTACAGCGACTCCTTAGCAGAAATTCCTGCTGTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GATCCCAACTCTCCCAATAAACCTCCCCTTACATTTGACATTATCAGGAAAAATGTTGAAAGTAATCGGTATCG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GCGACTTGATTTATTTCAGGAGCATATGTTTGAAGTATTGGAACGGGCAAGAAGGATGAACCGGACAGATTCCG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AAATATATGAGGATGCTGTAGAACTTCAGCAGTTTTTTATTAGAATTCGTGATGAACTCTGCAAAAATGGAGAG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ATCCTTCTTTCTCCAGCACTCAGCTATACCACAAAACACTTGCATAACGATGTGGAAAAAGAAAAAAAGGAAAA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 ATTGCCTAAAGAAATAGAGGAAGATAAACTAAAACGCGAAGAAGAAAAAAGAGAAGCTGAAAAAAGTGAAGATT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CCTCAGGTACTACAGGCCTCTCAGGCTTACATCGTACATACAGCCAGGACTGCAGCTTTAAGAACAGCATGTAT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CATGTCGGAGATTATGTCTATGTTGAACCTGCGGAGGCCAATCTACAACCACATATAGTGTGTATTGAGAGACT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GTGGGAGGATTCAGCTGGTGAAAAATGGTTGTACGGCTGTTGGTTTTATCGGCCAAATGAAACATTCCATTTGG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CTACACGAAAATTTCTAGAAAAAGAAGTTTTTAAGAGTGACTACTACAATAAAGTACCTGTTAGTAAAATTCTA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GGCAAATGTGTAGTCATGTTTGTCAAGGAATACTTTAAATTATGTCCAGAAAACTTTCGCGATGAGGATGTTTT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TGTCTGTGAATCGAGGTATTCTGCCAAAACCAAATCTTTTAAGAAAATTAAACTGTGGACCATGCCCATCAGTT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CAGTTAGATTTGTCCCTCGGGATGTGCCTTTGCCTGTGGTCCGAGTGGCCTCTGTGTTTGCAAATGCAGATAAA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GGGGATGATGAGAAGAATACAGACAACTCAGATGACAATAGAGCTGAAGACAATTTTAACTTGGAAAAGGAAAA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 AGAAGATGTTCCTGTGGAGATGTCCAATGGTGAGCCAGGTTGCCACTACTTTGAGCAGCTTCGGTACAATGACA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TGTGGCTGAAGGTTGGTGATTGTGTCTTCATCAAATCCCACGGCTTGGTGCGCCCTCGTGTGGGCAGAATTGAG 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 AAAGTATGGGTCCGAGATGGAGCTGCATATTTTTATGGCCCTATCTTCATTCATCCAGAAGAAACAGAACATGA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GCCCACAAAAATGTTCTACAAAAAAGAAGTGTTTCTGAGTAATCTGGAAGAGACCTGCCCTATGAGTTGTATTC 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TGGGGAAATGTGCAGTGCTGTCATTCAAGGACTTCCTCTCCTGCAGGCCAACTGAAATACCAGAAAATGACATT 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 CTGCTTTGTGAGAGCCGCTATAATGAGAGTGACAAGCAGATGAAGAAGTTCAAGGGTTTGAAGAGGTTTTCACT 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 CTCTGCTAAAGTTGTAGATGATGAAATCTACTACTTCAGAAAACCAATCATTCCTCAGAAGGAACCCTCACCTT 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 TGTTAGAAAAGAAGATACAATTGCTAGAAGCTAAATTTGCAGAGTTAGAAGGAGGAGATGATGATATTGAGGAG 3996
Query 1 ATGGGAGAAGAAGATAGTGAGGTCATTGAACCTCCTTCTCTACCTCAGCTTCAGACCCCCCTGGCCAGTGAGCT 74
|||||||||||.||||||||.|||||||||.||||.|||||||||||.||.|||||.||||||||||.||||.|
Sbjct 3997 ATGGGAGAAGAGGATAGTGAAGTCATTGAAGCTCCATCTCTACCTCAACTGCAGACACCCCTGGCCAATGAGTT 4070
Query 75 GGACCTCATGCCCTACACACCCCC---------------ACAGTCTACCCCAAAGTCTGCCAAAGGCAGTGCAA 133
|||||||||||||||.|||||||| |||||||||||||||||||||||||||||||||||
Sbjct 4071 GGACCTCATGCCCTATACACCCCCACAGCTTTCTGTCTTACAGTCTACCCCAAAGTCTGCCAAAGGCAGTGCAA 4144
Query 134 AGAAGGAAGGCTCCAAACGGAAAATCAACATGAGTGGCTACATCCTGTTCAGCAGTGAGATGAGGGCTGTGATT 207
||||||||.|.||.|||||.|||||||||||||||||||||||..|||||||||||||.|||||.|||||||||
Sbjct 4145 AGAAGGAAAGTTCTAAACGAAAAATCAACATGAGTGGCTACATTTTGTTCAGCAGTGAAATGAGAGCTGTGATT 4218
Query 208 AAGGCCCAACACCCAGACTACTCTTTCGGGGAGCTCAGCCGCCTGGTGGGGACAGAATGGAGAAATCTTGAGAC 281
||.|||||.|||||||||||||||||.||||||||||||.|.|||||||||||||||||||||||.|||||.||
Sbjct 4219 AAAGCCCAGCACCCAGACTACTCTTTTGGGGAGCTCAGCAGACTGGTGGGGACAGAATGGAGAAACCTTGAAAC 4292
Query 282 AGCCAAGAAAGCAGAATATGA----------------------------------------------------- 302
|||||||||||||||||||||
Sbjct 4293 AGCCAAGAAAGCAGAATATGAAGAGCGGGCAGCTAAAGTTGCTGAGCAGCAGGAGAGAGAGCGAGCAGCACAGC 4366
Query 303 -------------------------------------------------------------------------- 302
Sbjct 4367 AACAGCAGCCGAGTGCTTCTCCCCGAGCAGGCACCCCTGTGGGGGCTCTCATGGGGGTGGTGCCACCACCAACA 4440
Query 303 --------------------------------------AGGCATGATGGGTGGCTATCCGCCAGGCCTTCCACC 338
||||||||||||||||||||||||||||||||||||
Sbjct 4441 CCAATGGGGATGCTCAATCAGCAGTTGACACCTGTTGCAGGCATGATGGGTGGCTATCCGCCAGGCCTTCCACC 4514
Query 339 TTTGCAGGGCCCAGTTGATGGCCTTGTTAGCATGGGCAGCATGCAGCCACTTCACCCTGGGGGGCCTCCACCCC 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 4515 TTTGCAGGGCCCAGTTGATGGCCTTGTTAGCATGGGCAGCATGCAGCCACTTCACCCTGGGGGGCCTCCACCTC 4588
Query 413 ACCATCTTCCGCCAGGTGTGCCTGGCCTCCCGGGCATCCCACCACCGGGTGTGATGAACCAAGGAGTGGCCCCT 486
|||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.||||||||.|||||.
Sbjct 4589 ACCATCTTCCGCCAGGTGTGCCTGGCCTCCCAGGCATCCCACCACCGGGTGTGATGAATCAAGGAGTAGCCCCC 4662
Query 487 ATGGTAGGGACTCCAGCACCAGGTGGAAGTCCATATGGACAACAGGTGGGAGTTTTGGGGCCTCCAGGGCAGCA 560
||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||.||||||||||||||
Sbjct 4663 ATGGTAGGGACTCCAGCACCAGGTGGAAGTCCGTATGGACAACAGGTAGGAGTTTTGGGACCTCCAGGGCAGCA 4736
Query 561 GGCACCACCTCCATATCCCGGCCCACATCCAGCTGGACCCCCTGTCATACAGCAGCCAACAACACCCATGTTTG 634
||||||||||||||||||.||.||.|||||||||||.||||||||||||||||||||||||||.||||||||||
Sbjct 4737 GGCACCACCTCCATATCCTGGTCCTCATCCAGCTGGCCCCCCTGTCATACAGCAGCCAACAACGCCCATGTTTG 4810
Query 635 TAGCTCCCCCACCAAAGACCCAGCGGCTTCTTCACTCAGAGGCCTACCTGAAATACATTGAAGGACTCAGTGCG 708
|.||||||||||||||||||||..|||||||.|||||||||||||||||||||||||||||||||||||||||.
Sbjct 4811 TGGCTCCCCCACCAAAGACCCAAAGGCTTCTCCACTCAGAGGCCTACCTGAAATACATTGAAGGACTCAGTGCT 4884
Query 709 GAGTCCAACAGCATTAGCAAGTGGGATCAGACACTGGCAGCTCGAAGACGCGACGTCCATTTGTCGAAAGAACA 782
||.|||||||||||||||||||||||.||.||..||||||||||||||||.||.|||||||||||.||||||||
Sbjct 4885 GAATCCAACAGCATTAGCAAGTGGGACCAAACTTTGGCAGCTCGAAGACGGGATGTCCATTTGTCCAAAGAACA 4958
Query 783 GGAGAGCCGCCTACCCTCTCACTGGCTGAAAAGCAAAGGGGCCCACACCACCATGGCAGATGCCCTCTGGCGCC 856
|||||||||||||||.|||||||||||.|||||.||||||||.|||||||||||||||||||||||||||||||
Sbjct 4959 GGAGAGCCGCCTACCTTCTCACTGGCTCAAAAGTAAAGGGGCACACACCACCATGGCAGATGCCCTCTGGCGCC 5032
Query 857 TTCGAGATTTGATGCTCCGGGACACCCTCAACATTCGCCAAGCATACAACCTAGAAAATGTT 918
|.||.|||||.|||||.||.|||||.||||||||.||.||.|||||||||||||||||||||
Sbjct 5033 TACGGGATTTAATGCTTCGAGACACTCTCAACATCCGACAGGCATACAACCTAGAAAATGTT 5094
