Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15888
- Subject:
- XM_017316152.1
- Aligned Length:
- 5082
- Identities:
- 854
- Gaps:
- 4164
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGGAGATTGGCTTTTCGAGGCGCTGGTTGTGCTCTGAAGTTGGATTCCATGGGTTCCAAGAGAAGAAGAGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CACCTCTCCTTCCAGCAGTGTCAGTGGAGACTTTGATGACGGGCACCATTCTGTGCCTACACCAGGCCCAAGCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGAAAAGGAGAAGACTGTCCAATCTTCCAACTGTAGATCCTATTGCTGTGTGCCATGAACTCTATAACACCATC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGAGACTATAAGGATGAACAGGGCAGACTCCTCTGTGAGCTGTTCATTAGGGCTCCAAAGCGGAGAAATCAACC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGACTATTATGAAGTGGTTTCTCAGCCCATTGACTTGATGAAAATCCAACAGAAACTTAAAATGGAAGAGTATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGATGTTAATCTACTGACTGCTGACTTCCAGCTGCTTTTTAACAATGCAAAGGCCTACTATAAGCCAGATTCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCTGAGTATAAAGCTGCTTGTAAACTCTGGGATTTGTACCTTCGAACAAGAAATGAGTTTGTTCAGAAAGGAGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGCAGACGATGAAGATGATGACGAAGATGGGCAAGACAATCAAGGCACACTGGCTGACGGCTCTTCTCCAGGTT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATCTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCCACAAATCCATCAGGACGGCTCATCAGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAACTTTTTCAGAAACTGCCTTCCAAAGTGCAATATCCAGACTATTATGCAATAATTAAGGAACCTATAGATCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAAGACCATTGCTCAGAGGATACAGAATGGAAGCTACAAAAGTATACACGCAATGGCCAAAGATATAGATCTTC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TAGCAAAAAATGCCAAAACATACAATGAGCCTGGGTCTCAAGTATTCAAGGATGCCAATTCGATTAAAAAAATA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTTTATATGAAAAAGGCAGAAATTGAACATCATGAAATGACTAAATCAAGTCTTCGAATAAGTAATAAAAGAGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGTCCAAGGGGGTCGCTTGTCAGCAATTACCATGGCACTTCAGTATGGATCAGAGAGTGAAGAGGACGCTGCTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TAGCTGCTGCACGCTATGAAGAAGGGGAATCTGAAGCAGAGAGCATCACTTCCTTCATGGACGTTTCCAACCCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTTCATCAGCTTTACGACACAGTTAGGAGCTGTAGGAATCACCAAGGGCAGCTCATAGCTGAACCTTTCTTCCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTTGCCTTCAAAGAAAAAATACCCAGATTATTATCAGCAAATTAAAATGCCCATATCACTTCAACAGATCAGAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAAAGCTAAAGAACCAAGAATATGAAACTTTAGATCATTTGGAGTGTGATCTGAATTTAATGTTTGAAAATGCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AAACGTTATAACGTTCCCAATTCAGCCATCTATAAGCGAGTTCTAAAACTGCAGCAAGTCATGCAGGCAAAGAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GAAGGAGCTTGCGAGGAGAGATGACATTGAGGACGGAGACAGCATGATCTCCTCAGCCACTTCTGACACTGGTA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GTGCCAAAAGGAAAAGGAATACTCATGACAGTGAGATGTTGGGTCTCAGGAGGCTATCCAGTAAAAAGAACATA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGAAAACAGCGAATGAAAATTTTATTCAATGTTGTTCTTGAAGCTCGAGAGCCAGGTTCAGGCAGAAGACTTTG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CGATCTATTTATGGTTAAGCCATCCAAGAAGGACTATCCTGATTATTATAAAATCATCTTAGAGCCAATGGACC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGAAAATAATTGAGCATAACATCCGAAATGACAAATATGCAGGTGAAGAAGGAATGATGGAAGACATGAAACTC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ATGTTCCGCAATGCCAGGCACTACAATGAGGAGGGCTCCCAGGTATACAATGATGCCCATATCCTGGAGAAGTT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ACTCAAAGATAAAAGGAAAGAGCTGGGCCCTCTGCCTGATGATGATGACATGGCTTCTCCCAAACTTAAATTGA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GTAGGAAGAGTGGTGTTTCTCCTAAGAAATCAAAGTACATGACTCCAATGCAGCAGAAACTGAATGAAGTGTAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GAAGCTGTAAAGAACTATACTGATAAGAGGGGTCGCCGCCTTAGTGCTATATTTCTAAGACTCCCCTCTAGATC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AGAGCTGCCTGACTACTACCTGACCATTAAAAAGCCCATGGACATGGAAAAAATTCGAAGTCACATGATGGCAA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ACAAGTACCAAGACATAGATTCTATGGTAGAGGACTTTGTCATGATGTTTAATAATGCCTGTACCTACAATGAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CCAGAGTCTTTGATCTACAAAGATGCCCTTGTACTGCATAAAGTCCTCCTTGAGACTCGGAGAGACCTGGAGGG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGATGAGGATTCTCATGTCCCTAATGTGACGTTGCTGATTCAAGAGCTCATCCATAACCTTTTTGTGTCAGTCA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TGAGTCATCAGGATGACGAAGGGAGGTGTTACAGCGACTCCTTAGCAGAAATTCCTGCTGTGGATCCCAACTCT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CCCAATAAACCTCCCCTTACATTTGACATTATCAGGAAAAATGTTGAAAGTAATCGGTATCGGCGACTTGATTT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 ATTTCAGGAGCATATGTTTGAAGTATTGGAACGGGCAAGAAGGATGAACCGGACAGATTCCGAAATATATGAGG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ATGCTGTAGAACTTCAGCAGTTTTTTATTAGAATTCGTGATGAACTCTGCAAAAATGGAGAGATCCTTCTTTCT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CCAGCACTCAGCTATACCACAAAACACTTGCATAACGATGTGGAAAAAGAAAAAAAGGAAAAATTGCCTAAAGA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AATAGAGGAAGATAAACTAAAACGCGAAGAAGAAAAAAGAGAAGCTGAAAAAAGTGAAGATTCCTCAGGTACTA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CAGGCCTCTCAGGCTTACATCGTACATACAGCCAGGACTGCAGCTTTAAGAACAGCATGTATCATGTCGGAGAT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TATGTCTATGTTGAACCTGCGGAGGCCAATCTACAACCACATATAGTGTGTATTGAGAGACTGTGGGAGGATTC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AGCTGGTGAAAAATGGTTGTACGGCTGTTGGTTTTATCGGCCAAATGAAACATTCCATTTGGCTACACGAAAAT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TTCTAGAAAAAGAAGTTTTTAAGAGTGACTACTACAATAAAGTACCTGTTAGTAAAATTCTAGGCAAATGTGTA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GTCATGTTTGTCAAGGAATACTTTAAATTATGTCCAGAAAACTTTCGCGATGAGGATGTTTTTGTCTGTGAATC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GAGGTATTCTGCCAAAACCAAATCTTTTAAGAAAATTAAACTGTGGACCATGCCCATCAGTTCAGTTAGATTTG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TCCCTCGGGATGTGCCTTTGCCTGTGGTCCGAGTGGCCTCTGTGTTTGCAAATGCAGATAAAGGGGATGATGAG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 AAGAATACAGACAACTCAGATGACAATAGAGCTGAAGACAATTTTAACTTGGAAAAGGAAAAAGAAGATGTTCC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TGTGGAGATGTCCAATGGTGAGCCAGGTTGCCACTACTTTGAGCAGCTTCGGTACAATGACATGTGGCTGAAGG 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TTGGTGATTGTGTCTTCATCAAATCCCACGGCTTGGTGCGCCCTCGTGTGGGCAGAATTGAGAAAGTATGGGTC 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CGAGATGGAGCTGCATATTTTTATGGCCCTATCTTCATTCATCCAGAAGAAACAGAACATGAGCCCACAAAAAT 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GTTCTACAAAAAAGAAGTGTTTCTGAGTAATCTGGAAGAGACCTGCCCTATGAGTTGTATTCTGGGGAAATGTG 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CAGTGCTGTCATTCAAGGACTTCCTCTCCTGCAGGCCAACTGAAATACCAGAAAATGACATTCTGCTTTGTGAG 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 AGCCGCTATAATGAGAGTGACAAGCAGATGAAGAAGTTCAAGGGTTTGAAGAGGTTTTCACTCTCTGCTAAAGT 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 TGTAGATGATGAAATCTACTACTTCAGAAAACCAATCATTCCTCAGAAGGAACCCTCACCTTTGTTAGAAAAGA 3922
Query 1 --------------------------------------------------------------ATGGGAGAAGAA 12
|||||||||||.
Sbjct 3923 AGATACAATTGCTAGAAGCTAAATTTGCAGAGTTAGAAGGAGGAGATGATGATATTGAGGAGATGGGAGAAGAG 3996
Query 13 GATAGTGAGGTCATTGAACCTCCTTCTCTACCTCAGCTTCAGACCCCCCTGGCCAGTGAGCTGGACCTCATGCC 86
||||||||.|||||||||.||||.|||||||||||.||.|||||.||||||||||.||||.|||||||||||||
Sbjct 3997 GATAGTGAAGTCATTGAAGCTCCATCTCTACCTCAACTGCAGACACCCCTGGCCAATGAGTTGGACCTCATGCC 4070
Query 87 CTACACACCCCC---------------ACAGTCTACCCCAAAGTCTGCCAAAGGCAGTGCAAAGAAGGAAGGCT 145
|||.|||||||| |||||||||||||||||||||||||||||||||||||||||||.|.|
Sbjct 4071 CTATACACCCCCACAGCTTTCTGTCTTACAGTCTACCCCAAAGTCTGCCAAAGGCAGTGCAAAGAAGGAAAGTT 4144
Query 146 CCAAACGGAAAATCAACATGAGTGGCTACATCCTGTTCAGCAGTGAGATGAGGGCTGTGATTAAGGCCCAACAC 219
|.|||||.|||||||||||||||||||||||..|||||||||||||.|||||.|||||||||||.|||||.|||
Sbjct 4145 CTAAACGAAAAATCAACATGAGTGGCTACATTTTGTTCAGCAGTGAAATGAGAGCTGTGATTAAAGCCCAGCAC 4218
Query 220 CCAGACTACTCTTTCGGGGAGCTCAGCCGCCTGGTGGGGACAGAATGGAGAAATCTTGAGACAGCCAAGAAAGC 293
||||||||||||||.||||||||||||.|.|||||||||||||||||||||||.|||||.||||||||||||||
Sbjct 4219 CCAGACTACTCTTTTGGGGAGCTCAGCAGACTGGTGGGGACAGAATGGAGAAACCTTGAAACAGCCAAGAAAGC 4292
Query 294 AGAATATGA----------------------------------------------------------------- 302
|||||||||
Sbjct 4293 AGAATATGAAGAGCGGGCAGCTAAAGTTGCTGAGCAGCAGGAGAGAGAGCGAGCAGCACAGCAACAGCAGCCGA 4366
Query 303 -------------------------------------------------------------------------- 302
Sbjct 4367 GTGCTTCTCCCCGAGCAGGCACCCCTGTGGGGGCTCTCATGGGGGTGGTGCCACCACCAACACCAATGGGGATG 4440
Query 303 --------------------------AGGCATGATGGGTGGCTATCCGCCAGGCCTTCCACCTTTGCAGGGCCC 350
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4441 CTCAATCAGCAGTTGACACCTGTTGCAGGCATGATGGGTGGCTATCCGCCAGGCCTTCCACCTTTGCAGGGCCC 4514
Query 351 AGTTGATGGCCTTGTTAGCATGGGCAGCATGCAGCCACTTCACCCTGGGGGGCCTCCACCCCACCATCTTCCGC 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 4515 AGTTGATGGCCTTGTTAGCATGGGCAGCATGCAGCCACTTCACCCTGGGGGGCCTCCACCTCACCATCTTCCGC 4588
Query 425 CAGGTGTGCCTGGCCTCCCGGGCATCCCACCACCGGGTGTGATGAACCAAGGAGTGGCCCCTATGGTAGGGACT 498
|||||||||||||||||||.||||||||||||||||||||||||||.||||||||.|||||.||||||||||||
Sbjct 4589 CAGGTGTGCCTGGCCTCCCAGGCATCCCACCACCGGGTGTGATGAATCAAGGAGTAGCCCCCATGGTAGGGACT 4662
Query 499 CCAGCACCAGGTGGAAGTCCATATGGACAACAGGTGGGAGTTTTGGGGCCTCCAGGGCAGCAGGCACCACCTCC 572
||||||||||||||||||||.||||||||||||||.|||||||||||.||||||||||||||||||||||||||
Sbjct 4663 CCAGCACCAGGTGGAAGTCCGTATGGACAACAGGTAGGAGTTTTGGGACCTCCAGGGCAGCAGGCACCACCTCC 4736
Query 573 ATATCCCGGCCCACATCCAGCTGGACCCCCTGTCATACAGCAGCCAACAACACCCATGTTTGTAGCTCCCCCAC 646
||||||.||.||.|||||||||||.||||||||||||||||||||||||||.|||||||||||.||||||||||
Sbjct 4737 ATATCCTGGTCCTCATCCAGCTGGCCCCCCTGTCATACAGCAGCCAACAACGCCCATGTTTGTGGCTCCCCCAC 4810
Query 647 CAAAGACCCAGCGGCTTCTTCACTCAGAGGCCTACCTGAAATACATTGAAGGACTCAGTGCGGAGTCCAACAGC 720
||||||||||..|||||||.|||||||||||||||||||||||||||||||||||||||||.||.|||||||||
Sbjct 4811 CAAAGACCCAAAGGCTTCTCCACTCAGAGGCCTACCTGAAATACATTGAAGGACTCAGTGCTGAATCCAACAGC 4884
Query 721 ATTAGCAAGTGGGATCAGACACTGGCAGCTCGAAGACGCGACGTCCATTTGTCGAAAGAACAGGAGAGCCGCCT 794
||||||||||||||.||.||..||||||||||||||||.||.|||||||||||.||||||||||||||||||||
Sbjct 4885 ATTAGCAAGTGGGACCAAACTTTGGCAGCTCGAAGACGGGATGTCCATTTGTCCAAAGAACAGGAGAGCCGCCT 4958
Query 795 ACCCTCTCACTGGCTGAAAAGCAAAGGGGCCCACACCACCATGGCAGATGCCCTCTGGCGCCTTCGAGATTTGA 868
|||.|||||||||||.|||||.||||||||.||||||||||||||||||||||||||||||||.||.|||||.|
Sbjct 4959 ACCTTCTCACTGGCTCAAAAGTAAAGGGGCACACACCACCATGGCAGATGCCCTCTGGCGCCTACGGGATTTAA 5032
Query 869 TGCTCCGGGACACCCTCAACATTCGCCAAGCATACAACCTAGAAAATGTT 918
||||.||.|||||.||||||||.||.||.|||||||||||||||||||||
Sbjct 5033 TGCTTCGAGACACTCTCAACATCCGACAGGCATACAACCTAGAAAATGTT 5082
