Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15920
- Subject:
- NR_033328.2
- Aligned Length:
- 5753
- Identities:
- 417
- Gaps:
- 5324
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGTTCTGCCCGGGGACGCAGCCCAGTTGGTAGCGTCGCTCCCTGAGCGTTTCTAAGGGGGCCGCCCGGCCTTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTTTCGGCAGTGGCCGAGCCACCGCCGCCTGCCGCGCGTTCCAGAGCTGGGCGCTGCAGCTGCACTGCCGATC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCGTGTTTGGTCGATAGAATCCCCAGTGTGCCCAGAGAGTGCGACCCCTCGCCCGGCCCGGCGAGCCCCGGGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTGAACCGAGCTGAGGGAGGATGGCAGCCTCTGGGGTGGAGAAGAGCAGCAAGAAGAAGACCGAGAAGAAACTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTGCTCGGGAAGAAGCTAAATTGTTGGCGGGTTTCATGGGCGTCATGAATAACATGCGGAAACAGTGATTTAA 370
Query 1 ---------------------------------------------------------------------ATGCT 5
|||||
Sbjct 371 ATCTACCACCCAGCTGTAGTTGAATCTACAATCTGCTCAGGGATTTATACTCAATGCCAATTTGATATCATGCT 444
Query 6 GGGAGGGACTGATTGCAGAACCTTCTTGACAAGCCACATAAATCTAAAGAAAACGTTGTGTGACGTGATCCTCA 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGGAGGGACTGATTGCAGAACCTTCTTGACAAGCCACATAAATCTAAAGAAAACGTTGTGTGACGTGATCCTCA 518
Query 80 TGGTCCAGGAAAGAAAGATACCTGCTCATCGTGTTGTTCTTGCTGCAGCCAGTCATTTTTTTAACTTAATGTTC 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGGTCCAGGAAAGAAAGATACCTGCTCATCGTGTTGTTCTTGCTGCAGCCAGTCATTTTTTTAACTTAATGTTC 592
Query 154 ACAACTAACATGCTTGAATCAAAGTCCTTTGAAGTAGAACTCAAAGATGCTGAACCTGATATTATTGAACAACT 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ACAACTAACATGCTTGAATCAAAGTCCTTTGAAGTAGAACTCAAAGATGCTGAACCTGATATTATTGAACAACT 666
Query 228 GGTGGAATTTGCTTATACTGCTAGAATTTCCGTGAATAGCAACAATGTTCAGTCTTTGTTGGATGCAGCAAACC 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct 667 GGTGGAATTTGCTTATACTGCTAGAATTTCCGTGAATAGCAACAATGTTCAGTCTTTGCTGGATGCAGCAAACC 740
Query 302 AATATCAGATTGAACCTGTGAAGAAAATGTGTGTTGATTTTTTGAAAGAACAAGTTGATGCTTCAAATTGTCTT 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AATATCAGATTGAACCTGTGAAGAAAATGTGTGTTGATTTTTTGAAAGAACAAGTTGATGCTTCAAATTGTCTT 814
Query 376 GG-AGAAG--------------------------CAGAA---AAAG------------------TTGATCAGAG 401
|| |.||| |.||| |||| ||.|||||..
Sbjct 815 GGTATAAGTGTGCTAGCGGAGTGTCTAGATTGTCCTGAATTGAAAGCAACTGCAGATGACTTTATTCATCAGCA 888
Query 402 CCTTCCAG-AGT--------GTGGTATGCTTTTC----ACTGTG------------------------------ 432
|.||.|.| ||| .|| |||..|||| ||| ||
Sbjct 889 CTTTACTGAAGTTTACAAAACTG--ATGAATTTCTTCAACT-TGATGTCAAGCGAGTAACACATCTTCTCAACC 959
Query 433 -------------------------------------------------------------------------- 432
Sbjct 960 AGGACACTCTGACTGTGAGAGCAGAGGATCAGGTTTATGATGCTGCAGTCAGGTGGTTGAAATACGATGAACCT 1033
Query 433 -------------------------------------------------------------------------- 432
Sbjct 1034 AATCGCCAGCCATTTATGGTTGATATCCTTGCTAAAGTCAGGTTTCCTCTTATATCAAAGAATTTCTTAAGTAA 1107
Query 433 -------------------------------------------------------------------------- 432
Sbjct 1108 AACGGTACAAGCTGAACCACTTATTCAAGACAATCCTGAATGCCTTAAGATGGTGATAAGTGGAATGAGGTACC 1181
Query 433 -------------------------------------------------------------------------- 432
Sbjct 1182 ATCTACTGTCTCCAGAGGACCGAGAAGAACTTGTAGATGGCACAAGACCTAGAAGAAAGAAACATGACTACCGC 1255
Query 433 -------------------------------------------------------------------------- 432
Sbjct 1256 ATAGCCCTATTTGGAGGCTCTCAACCACAGTCTTGTAGATATTTTAACCCAAAGGATTATAGCTGGACAGACAT 1329
Query 433 -------------------------------------------------------------------------- 432
Sbjct 1330 CCGCTGCCCCTTTGAAAAACGAAGAGATGCAGCATGCGTGTTTTGGGACAATGTAGTATACATTTTGGGAGGCT 1403
Query 433 -------------------------------------------------------------------------- 432
Sbjct 1404 CTCAGCTTTTCCCAATAAAGCGAATGGACTGCTATAATGTAGTGAAGGATAGCTGGTATTCGAAACTGGGTCCT 1477
Query 433 -------------------------------------------------------------------------- 432
Sbjct 1478 CCGACACCTCGAGACAGCCTTGCTGCATGTGCTGCAGAAGGCAAAATTTATACATCTGGAGGTTCAGAAGTAGG 1551
Query 433 -------------------------------------------------------------------------- 432
Sbjct 1552 AAACTCAGCTCTGTATTTATTTGAGTGCTATGATACGAGAACTGAAAGCTGGCACACAAAGCCCAGCATGCTGA 1625
Query 433 -------------------------------------------------------------------------- 432
Sbjct 1626 CCCAGCGCTGCAGCCATGGGATGGTGGAAGCCAATGGCCTAATCTATGTTTGTGGTGGAAGTTTAGGAAACAAT 1699
Query 433 -------------------------------------------------------------------------- 432
Sbjct 1700 GTTTCTGGGAGAGTGCTTAATTCCTGTGAAGTTTATGATCCTGCCACAGAAACATGGACTGAGCTGTGTCCAAT 1773
Query 433 -------------------------------------------------------------------------- 432
Sbjct 1774 GATTGAAGCCAGGAAGAATCATGGGCTGGTATTTGTAAAAGACAAGATATTTGCTGTGGGTGGTCAGAATGGTT 1847
Query 433 -------------------------------------------------------------------------- 432
Sbjct 1848 TAGGTGGTCTGGACAATGTGGAATATTACGATATTAAGTTGAACGAATGGAAGATGGTCTCACCAATGCCATGG 1921
Query 433 -------------------------------------------------------------------------- 432
Sbjct 1922 AAGGGTGTAACAGTGAAATGTGCAGCAGTTGGCTCTATAGTTTATGTCTTGGCTGGTTTTCAGGGTGTTGGTCG 1995
Query 433 -------------------------------------------------------------------------- 432
Sbjct 1996 ATTAGGACACATTCTCGAATATAATACCGAAACAGACAAATGGGTTGCCAACTCCAAAGTTCGTGCTTTTCCAG 2069
Query 433 -------------------------------------------------------------------------- 432
Sbjct 2070 TCACAAGTTGTTTAATTTGTGTTGTCGATACTTGTGGAGCAAATGAAGAGACCCTTGAAACATGAAAAATGAGT 2143
Query 433 -------------------------------------------------------------------------- 432
Sbjct 2144 GGACTTCAGACTCATCAGAGACTCTAAAATATAGCCACCAGTGCTTTGTTCCAGGAGTTTGGTGACAAAGTTTT 2217
Query 433 -------------------------------------------------------------------------- 432
Sbjct 2218 GGTTTGGTGTTTTGGTAAAGAAAGTTTCAAGTGAAATGAGGTTCCTATAAAATAGATGTTTCTTTTATATGGAT 2291
Query 433 -------------------------------------------------------------------------- 432
Sbjct 2292 TTCCTTAATTCAAAGATCATATTTTAGCTGGCCACAAAACCAAGAACATATCTAGCAAGAAAACTTGAAAAAGT 2365
Query 433 -------------------------------------------------------------------------- 432
Sbjct 2366 ATAAGCATTTGTTAAAAATGTGAATTTCTTGAATGAATTTCACATTTGTAACTATGATTTTGGCAGAATAGAAG 2439
Query 433 -------------------------------------------------------------------------- 432
Sbjct 2440 ATTGGCTCATCAGTGAAGCGCAGTATCTTAGCTCTAGATTCTATTTTCATGCATCACAGAAGTGCTATACGGTT 2513
Query 433 -------------------------------------------------------------------------- 432
Sbjct 2514 AGGTCTGTTTGTGCTCAGTCAAGAACTAAGAAATAGTATGAATTGTAAGTCAAGATGGGCAACTCAGATGGAGC 2587
Query 433 -------------------------------------------------------------------------- 432
Sbjct 2588 AGCTTAGTCTCACAGTTTGCTTGTCTATTTATTTTATTTAGTGCCAAATGTATTCCATTTTAAAAGTAAGCCAG 2661
Query 433 -------------------------------------------------------------------------- 432
Sbjct 2662 AGTGAGTCAAGGCATATACACACTTTCTCACAAAACTTCCTAAACAGATTTGGGGGTTTAATATGTCCAACTCC 2735
Query 433 -------------------------------------------------------------------------- 432
Sbjct 2736 TCATGAAATATATTCAATCCACTTAAATATATTCCATCTTTTTAACATAAAATGTAAAGCTTAGCACCCATCAT 2809
Query 433 -------------------------------------------------------------------------- 432
Sbjct 2810 TAATTTATGTCTCTGTTTTATCCAGTGGTTAAAAAAGGATTCTGCCTCTTTAGTCCTCACTGTTAAATAAAACC 2883
Query 433 -------------------------------------------------------------------------- 432
Sbjct 2884 CAATCATAGTAAGTGATTAACTAGCAAAAAGTAAAGCTATTTATAGCAAATTTCTAGATCATTAGAAAAGCACT 2957
Query 433 -------------------------------------------------------------------------- 432
Sbjct 2958 GGTAGTTGTACAATATCAGTGTTGACTTTGAACTTCTTTAACGAGATCATGAATTCTTTTCCCTTAGCCAAAAC 3031
Query 433 -------------------------------------------------------------------------- 432
Sbjct 3032 ATGAAATATTTAACCTAGTTGTCTCTAAAAGTTTTGTAATCATGAGTTAGATATATGTCATCTCCTATTCATTG 3105
Query 433 -------------------------------------------------------------------------- 432
Sbjct 3106 CTTTTATGTGATCAATAAATCTTTTACAAACCCAACTACTCATTTCCTTCCTAGTAATACTTTGCCTTTTTCAC 3179
Query 433 -------------------------------------------------------------------------- 432
Sbjct 3180 TGTGTATGGAATGAAACATGTAAAGCTGTCACAATCAATGTTTTTATCTGATAATATTAAATATTTTTTAACTT 3253
Query 433 -------------------------------------------------------------------------- 432
Sbjct 3254 AAAATAGGCCACTCAGTTTGTTCTTCAAGTATTTTAGGTAATGGTTGTTTTTAGAATTTGTGAACCAGTGTCTC 3327
Query 433 -------------------------------------------------------------------------- 432
Sbjct 3328 TTAATTTTCAGTTTTCTTTATATAGAGGTTATAATAGTCTTAAACCCTAAAAATGTTTAAATCAAAAAGGAATT 3401
Query 433 -------------------------------------------------------------------------- 432
Sbjct 3402 AGGAAAAACATAATGATAGGTATATTTCTATTTGTGTAGGGTTTTTTAATGTACAGCTTTATTGAGATATAATT 3475
Query 433 -------------------------------------------------------------------------- 432
Sbjct 3476 CACATACCATACAATTCACCATTTAAAGTATACTATTCAGGCCAGGCACAGTGGCTCACGCCTGTAATCCCAGC 3549
Query 433 -------------------------------------------------------------------------- 432
Sbjct 3550 ACTTTGGGAGGCCAAGGTGGGTAGATCATTTGAGGTCAGCAGTTCAAGACCACCCTGGCCAACATGATGAGACC 3623
Query 433 -------------------------------------------------------------------------- 432
Sbjct 3624 CCGTCTCTACTAAAAATACAAAAATTAGCCAGGCCTGGTGGTGTGCACTTGTAATCCCAGCTATTCAGGAGACT 3697
Query 433 -------------------------------------------------------------------------- 432
Sbjct 3698 GAGGCAGGAGGATTGCTTGAACCTGACAGGCAGAGGTTGCAGTGAGCTGAGATCAAGCCACTGCACCCCAGCCT 3771
Query 433 -------------------------------------------------------------------------- 432
Sbjct 3772 GGGCAACAGAGCAAGACTAAAAAAAAAAAAAAAAAAAAAAAAATGTATTATTCAGTGGTTTTTAATATATCCAC 3845
Query 433 -------------------------------------------------------------------------- 432
Sbjct 3846 AGAGTTACGCAACCATCACCACAATTTTAGAACATTTTCATCACCCCAAAAAGAAACCTTGTACTGATTAGCAA 3919
Query 433 -------------------------------------------------------------------------- 432
Sbjct 3920 TGGTTCCCTATTTCCCCCAACGCCCCTGTATTTCCTAGGGCTACCATAACAAACTACTGCAAACTTGGTGGCTT 3993
Query 433 -------------------------------------------------------------------------- 432
Sbjct 3994 TAAAGAACAGAAATTTATTCTCTCACAATTCAGGAAGCCAGCACTCCTAAATCAAGTTGTCAGCAGGGTTAGTT 4067
Query 433 -------------------------------------------------------------------------- 432
Sbjct 4068 CCTTCTGGAGGGTCTGCAGCAGAAACCACACATGCCTCTCCCCTAGCTTCTGGTGGTTGCCAGCAATCCTCAGC 4141
Query 433 -------------------------------------------------------------------------- 432
Sbjct 4142 ATTCTTTGGCTTGTAGCTGCAGCACTTCAGTCTCTGTCTCTGTCTTCGCATGGGCTTTTTCCCTGTGTGTCTCT 4215
Query 433 -------------------------------------------------------------------------- 432
Sbjct 4216 GTATCTTCACATGGTGTTCTTATAAGGACAACATAGGAGCCAGACACAGTGGCTCAGGCCGGTAATTTCAACAC 4289
Query 433 -------------------------------------------------------------------------- 432
Sbjct 4290 TTTGGGAGGTGGAGGCAGTAGGATCACTTGAGGCTAGGAGTTCAAGACCCTGTCTCTACAAAAAAATAAAAAGT 4363
Query 433 -------------------------------------------------------------------------- 432
Sbjct 4364 TAGCAGGTGTGGTATATACCTGCAGTTCTAGCTACTCAGAAGGCTGAGGTGGGAGGATCACTTGAGCCCAGGAG 4437
Query 433 -------------------------------------------------------------------------- 432
Sbjct 4438 TTCAAGGATGTAGTGAGCTATGATTGTGCCACTGCACTCCAGCCTGGGTGACAGACTGAGACCCTGTCTCATTA 4511
Query 433 -------------------------------------------------------------------------- 432
Sbjct 4512 AAAAAAAAAAAAAAAAAGCTGGGCGCTGTGTCTCACGCCCTTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTG 4585
Query 433 -------------------------------------------------------------------------- 432
Sbjct 4586 GATTACCTGAGGTCAGGAGTTTGAGACCAGCCTGGACAACATGCCAAAACCCCGTCTCTACTAAAAATACAAAA 4659
Query 433 -------------------------------------------------------------------------- 432
Sbjct 4660 ATTAGCCAGGTATGGTGGTGTGCACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGTAGGAGAATTGCTTGAACC 4733
Query 433 -------------------------------------------------------------------------- 432
Sbjct 4734 TGGGAGGCAGAGGTTGCAGTGAGCTGAGATTGCGCCACTTCATTCCAGCCTGGGTGACAGAGCAAGACACCTTC 4807
Query 433 -------------------------------------------------------------------------- 432
Sbjct 4808 TCAAAGCAAAATACAAACAAAAAAAGGACAACATAGGGCCCGCAATCCAGTATGACCTTATTTTAATTACACCT 4881
Query 433 -------------------------------------------------------------------------- 432
Sbjct 4882 GTAAAGACCCCATTTCCAAACGAGGACACATTCTGAGCTTCTGGATAGACATGAATTTGGGGAGATGCTGTTCA 4955
Query 433 -------------------------------------------------------------------------- 432
Sbjct 4956 ACACAGAAAACCTCCCAAACACCATAGCCCTAGGCAACCACTAATCTACTTTCTGTCTCTAGATTTGATTATTC 5029
Query 433 -------------------------------------------------------------------------- 432
Sbjct 5030 TGAACATTTTTAGTAGGGTTTTCAATTTTGCACTCTATTGAAAAATGTGGCTAGTTTAATTTTTTGAGAGTGAA 5103
Query 433 -------------------------------------------------------------------------- 432
Sbjct 5104 ATATCCATTTATTATATTACAATATAGCTATATAATTTGACAATCTCCTATGTAGAATATACAGTACCTGTCTA 5177
Query 433 -------------------------------------------------------------------------- 432
Sbjct 5178 AGATATTTTAAGTACACCAGCATTTCCTTTTAGGCTATGTCAATTGACTAGAACACACTATAGTAAATACATAC 5251
Query 433 -------------------------------------------------------------------------- 432
Sbjct 5252 ACAGGTTTGATGTGGATTATAATGAAGTGGTTTTTTTCCTTAGTAATCTGTATCATAATTCCCAATTAGTGTCT 5325
Query 433 -------------------------------------------------------------------------- 432
Sbjct 5326 TTTTCTGCCTTGGAAATTTCTACAGAATTGTCAATATCAGGATAGTGCGTAAAAGTACACTCACCATACTGACA 5399
Query 433 -------------------------------------------------------------------------- 432
Sbjct 5400 AGCACATTTTCTATTTTGTTGCCCAAAACTCCCTGTCCTGTAAAGTGCTCTGCTTGCTTTTTAGTAGACATTTG 5473
Query 433 -------------------------------------------------------------------------- 432
Sbjct 5474 ATAAGTTAATGTTATATCCTTTGCAATGATATTATTTTGATGACAAAGTAAGTTTATGCTTTCAAAAATCACAA 5547
Query 433 -------------------------------------------------------------------------- 432
Sbjct 5548 TTCGGTCAGAAAAGTTTAGCATCTTAAAAAAATTGTTGCTATTTGAAAAAAACAAAACAAAACATATACTTGTG 5621
Query 433 -------------------------------------------------------------------------- 432
Sbjct 5622 ACTTTGTGGTCCAGCTGGCAAAAACTTGACATATCATCCCATGAAAATTTTAAGTCATGAATTATTTTGACATG 5695
Query 433 ------------------------------------------------------- 432
Sbjct 5696 ACAATATTGCTAACAAAATCAAAATCAGCCGTTTAATAAACAATTATTCCACCAA 5750
