Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_15937
- Subject:
- NM_020532.5
- Aligned Length:
- 3585
- Identities:
- 585
- Gaps:
- 2997
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAAGACCTGGACCAGTCTCCTCTGGTCTCGTCCTCGGACAGCCCACCCCGGCCGCAGCCCGCGTTCAAGTA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCAGTTCGTGAGGGAGCCCGAGGACGAGGAGGAAGAAGAGGAGGAGGAAGAGGAGGACGAGGACGAAGACCTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGAGCTGGAGGTGCTGGAGAGGAAGCCCGCCGCCGGGCTGTCCGCGGCCCCAGTGCCCACCGCCCCTGCCGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCGCGCCCCTGATGGACTTCGGAAATGACTTCGTGCCGCCGGCGCCCCGGGGACCCCTGCCGGCCGCTCCCCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGTCGCCCCGGAGCGGCAGCCGTCTTGGGACCCGAGCCCGGTGTCGTCGACCGTGCCCGCGCCATCCCCGCTGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGCTGCCGCAGTCTCGCCCTCCAAGCTCCCTGAGGACGACGAGCCTCCGGCCCGGCCTCCCCCTCCTCCCCCG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCAGCGTGAGCCCCCAGGCAGAGCCCGTGTGGACCCCGCCAGCCCCGGCTCCCGCCGCGCCCCCCTCCACCCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGCCGCGCCCAAGCGCAGGGGCTCCTCGGGCTCAGTGGATGAGACCCTTTTTGCTCTTCCTGCTGCATCTGAGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTGTGATACGCTCCTCTGCAGAAAATATGGACTTGAAGGAGCAGCCAGGTAACACTATTTCGGCTGGTCAAGAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GATTTCCCATCTGTCCTGCTTGAAACTGCTGCTTCTCTTCCTTCTCTGTCTCCTCTCTCAGCCGCTTCTTTCAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGAACATGAATACCTTGGTAATTTGTCAACAGTATTACCCACTGAAGGAACACTTCAAGAAAATGTCAGTGAAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTTCTAAAGAGGTCTCAGAGAAGGCAAAAACTCTACTCATAGATAGAGATTTAACAGAGTTTTCAGAATTAGAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TACTCAGAAATGGGATCATCGTTCAGTGTCTCTCCAAAAGCAGAATCTGCCGTAATAGTAGCAAATCCTAGGGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGAAATAATCGTGAAAAATAAAGATGAAGAAGAGAAGTTAGTTAGTAATAACATCCTTCATAATCAACAAGAGT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TACCTACAGCTCTTACTAAATTGGTTAAAGAGGATGAAGTTGTGTCTTCAGAAAAAGCAAAAGACAGTTTTAAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GAAAAGAGAGTTGCAGTGGAAGCTCCTATGAGGGAGGAATATGCAGACTTCAAACCATTTGAGCGAGTATGGGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGTGAAAGATAGTAAGGAAGATAGTGATATGTTGGCTGCTGGAGGTAAAATCGAGAGCAACTTGGAAAGTAAAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGGATAAAAAATGTTTTGCAGATAGCCTTGAGCAAACTAATCACGAAAAAGATAGTGAGAGTAGTAATGATGAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACTTCTTTCCCCAGTACGCCAGAAGGTATAAAGGATCGTTCAGGAGCATATATCACATGTGCTCCCTTTAACCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGCAGCAACTGAGAGCATTGCAACAAACATTTTTCCTTTGTTAGGAGATCCTACTTCAGAAAATAAGACCGATG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AAAAAAAAATAGAAGAAAAGAAGGCCCAAATAGTAACAGAGAAGAATACTAGCACCAAAACATCAAACCCTTTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTTGTAGCAGCACAGGATTCTGAGACAGATTATGTCACAACAGATAATTTAACAAAGGTGACTGAGGAAGTCGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGCAAACATGCCTGAAGGCCTGACTCCAGATTTAGTACAGGAAGCATGTGAAAGTGAATTGAATGAAGTTACTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTACAAAGATTGCTTATGAAACAAAAATGGACTTGGTTCAAACATCAGAAGTTATGCAAGAGTCACTCTATCCT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GCAGCACAGCTTTGCCCATCATTTGAAGAGTCAGAAGCTACTCCTTCACCAGTTTTGCCTGACATTGTTATGGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGCACCATTGAATTCTGCAGTTCCTAGTGCTGGTGCTTCCGTGATACAGCCCAGCTCATCACCATTAGAAGCTT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTTCAGTTAATTATGAAAGCATAAAACATGAGCCTGAAAACCCCCCACCATATGAAGAGGCCATGAGTGTATCA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTAAAAAAAGTATCAGGAATAAAGGAAGAAATTAAAGAGCCTGAAAATATTAATGCAGCTCTTCAAGAAACAGA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AGCTCCTTATATATCTATTGCATGTGATTTAATTAAAGAAACAAAGCTTTCTGCTGAACCAGCTCCGGATTTCT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CTGATTATTCAGAAATGGCAAAAGTTGAACAGCCAGTGCCTGATCATTCTGAGCTAGTTGAAGATTCCTCACCT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GATTCTGAACCAGTTGACTTATTTAGTGATGATTCAATACCTGACGTTCCACAAAAACAAGATGAAACTGTGAT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GCTTGTGAAAGAAAGTCTCACTGAGACTTCATTTGAGTCAATGATAGAATATGAAAATAAGGAAAAACTCAGTG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CTTTGCCACCTGAGGGAGGAAAGCCATATTTGGAATCTTTTAAGCTCAGTTTAGATAACACAAAAGATACCCTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TTACCTGATGAAGTTTCAACATTGAGCAAAAAGGAGAAAATTCCTTTGCAGATGGAGGAGCTCAGTACTGCAGT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TTATTCAAATGATGACTTATTTATTTCTAAGGAAGCACAGATAAGAGAAACTGAAACGTTTTCAGATTCATCTC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CAATTGAAATTATAGATGAGTTCCCTACATTGATCAGTTCTAAAACTGATTCATTTTCTAAATTAGCCAGGGAA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TATACTGACCTAGAAGTATCCCACAAAAGTGAAATTGCTAATGCCCCGGATGGAGCTGGGTCATTGCCTTGCAC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AGAATTGCCCCATGACCTTTCTTTGAAGAACATACAACCCAAAGTTGAAGAGAAAATCAGTTTCTCAGATGACT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TTTCTAAAAATGGGTCTGCTACATCAAAGGTGCTCTTATTGCCTCCAGATGTTTCTGCTTTGGCCACTCAAGCA 2886
Query 1 ----------------------------------------------------------------AT-------- 2
||
Sbjct 2887 GAGATAGAGAGCATAGTTAAACCCAAAGTTCTTGTGAAAGAAGCTGAGAAAAAACTTCCTTCCGATACAGAAAA 2960
Query 3 ---GGACGG-------------------TCAGAAG--------AAAAATTGGAAGGACAAGGTTGTTGACCTCC 46
||||.| ||||.|| ||||.|| || |||||||||||||
Sbjct 2961 AGAGGACAGATCACCATCTGCTATATTTTCAGCAGAGCTGAGTAAAACTT-------CA--GTTGTTGACCTCC 3025
Query 47 TGTACTGGAGAGACATTAAGAAGACTGGAGTGGTGTTTGGTGCCAGCCTATTCCTGCTGCTTTCATTGACAGTA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3026 TGTACTGGAGAGACATTAAGAAGACTGGAGTGGTGTTTGGTGCCAGCCTATTCCTGCTGCTTTCATTGACAGTA 3099
Query 121 TTCAGCATTGTGAGCGTAACAGCCTACATTGCCTTGGCCCTGCTCTCTGTGACCATCAGCTTTAGGATATACAA 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3100 TTCAGCATTGTGAGCGTAACAGCCTACATTGCCTTGGCCCTGCTCTCTGTGACCATCAGCTTTAGGATATACAA 3173
Query 195 GGGTGTGATCCAAGCTATCCAGAAATCAGATGAAGGCCACCCATTCAGGGCATATCTGGAATCTGAAGTTGCTA 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3174 GGGTGTGATCCAAGCTATCCAGAAATCAGATGAAGGCCACCCATTCAGGGCATATCTGGAATCTGAAGTTGCTA 3247
Query 269 TATCTGAGGAGTTGGTTCAGAAGTACAGTAATTCTGCTCTTGGTCATGTGAACTGCACGATAAAGGAACTCAGG 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3248 TATCTGAGGAGTTGGTTCAGAAGTACAGTAATTCTGCTCTTGGTCATGTGAACTGCACGATAAAGGAACTCAGG 3321
Query 343 CGCCTCTTCTTAGTTGATGATTTAGTTGATTCTCTGAAGTTTGCAGTGTTGATGTGGGTATTTACCTATGTTGG 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3322 CGCCTCTTCTTAGTTGATGATTTAGTTGATTCTCTGAAGTTTGCAGTGTTGATGTGGGTATTTACCTATGTTGG 3395
Query 417 TGCCTTGTTTAATGGTCTGACACTACTGATTTTGGCTCTCATTTCACTCTTCAGTGTTCCTGTTATTTATGAAC 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3396 TGCCTTGTTTAATGGTCTGACACTACTGATTTTGGCTCTCATTTCACTCTTCAGTGTTCCTGTTATTTATGAAC 3469
Query 491 GGCATCAGGCACAGATAGATCATTATCTAGGACTTGCAAATAAGAATGTTAAAGATGCTATGGCTAAAATCCAA 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3470 GGCATCAGGCACAGATAGATCATTATCTAGGACTTGCAAATAAGAATGTTAAAGATGCTATGGCTAAAATCCAA 3543
Query 565 GCAAAAATCCCTGGATTGAAGCGCAAAGCTGAA 597
|||||||||||||||||||||||||||||||||
Sbjct 3544 GCAAAAATCCCTGGATTGAAGCGCAAAGCTGAA 3576
